FFCP PHASE1:Hg19::chr18:9091200..9091217,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:9091200..9091217,- | |||
|coexpression_cluster_id=C3735 | |||
|description=CAGE_peak_at_chr18:9091200..9091217,- | |||
|id=chr18:9091200..9091217,- | |||
|ontology_enrichment_celltype=CL:0000624!1.64e-22!6;CL:0000084!3.33e-18!25;CL:0000827!3.33e-18!25;CL:0000738!4.84e-16!140;CL:0000791!4.58e-15!18;CL:0000789!4.58e-15!18;CL:0002420!4.58e-15!18;CL:0002419!4.58e-15!18;CL:0000790!4.58e-15!18;CL:0000037!1.11e-12!172;CL:0000566!1.11e-12!172;CL:0000838!5.58e-12!52;CL:0000898!5.60e-12!3;CL:0000542!1.09e-11!53;CL:0000051!1.09e-11!53;CL:0000988!1.42e-11!182;CL:0000623!2.62e-11!3;CL:0000825!2.62e-11!3;CL:0000767!3.60e-11!3;CL:0000842!4.14e-11!3;CL:0002087!6.97e-11!119;CL:0002032!1.99e-10!165;CL:0000837!1.99e-10!165;CL:0002031!4.22e-09!124;CL:0000815!1.67e-08!2;CL:0000792!1.67e-08!2;CL:0002677!1.67e-08!2;CL:0000224!1.94e-08!4;CL:0000094!3.01e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000624;3.33e-41;6!CL:0000898;3.96e-21;3!CL:0000791;4.76e-18;18!CL:0000789;4.76e-18;18!CL:0002419;4.76e-18;18!CL:0000815;1.80e-14;2!CL:0000792;1.80e-14;2!CL:0002677;1.80e-14;2!CL:0000084;9.02e-13;25!CL:0000895;2.09e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.02e-41,6;CL:0000898,1.78e-21,3;CL:0000791,3.67e-18,18;CL:0000789,3.67e-18,18;CL:0002420,3.67e-18,18;CL:0002419,3.67e-18,18;CL:0000790,3.67e-18,18;CL:0000815,7.84e-15,2;CL:0000792,7.84e-15,2;CL:0002677,7.84e-15,2;CL:0000084,7.51e-13,25;CL:0000827,7.51e-13,25;CL:0000810,2.17e-08,1;CL:0000895,2.17e-08,1;CL:0002436,2.17e-08,1;CL:0002427,2.17e-08,1;CL:0002428,2.17e-08,1;CL:0002429,2.17e-08,1;CL:0002433,2.17e-08,1;CL:0002431,2.17e-08,1;CL:0002432,2.17e-08,1;CL:0000838,1.98e-07,52;CL:0000542,2.88e-07,53;CL:0000051,2.88e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;4.76e-18;18!CL:0002427;2.09e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.46e-10!15;UBERON:0000179!1.46e-10!15;UBERON:0000463!1.46e-10!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2274711980715,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,1.51907609501096,0.447830948479849,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32761494250433,1.57204305099666,5.34563897398724,4.01247588937627,1.95553359980154,3.78758244587787,1.94826728407911,9.13565746458423,1.76763544484902,2.43687284041983,1.35401931882508,4.22701355094728,4.03183977435623,2.46656856905514,2.21080014228679,2.60822777161547,1.03800594213442,1.07016331235885,0,1.35971211237079,2.29932296161153,1.03088233644789,0.506039384039006,0,0,0,0,0,0,0,0,1.00803371612366,0.534880391567015,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.646882724578552,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.2942852049117,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29391162142713,1.13929437434833,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr18:9091200..9091217,- | |||
}} |
Latest revision as of 21:21, 24 September 2015
Short description: | p@chr18:9091200..9091217, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:9091200..9091217, - |
Coexpression cluster: | C3735_Basophils_CD4_CD8_Eosinophils_Whole_Neutrophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.02e-41 | 6 |
naive T cell | 1.78e-21 | 3 |
mature alpha-beta T cell | 3.67e-18 | 18 |
alpha-beta T cell | 3.67e-18 | 18 |
immature T cell | 3.67e-18 | 18 |
mature T cell | 3.67e-18 | 18 |
immature alpha-beta T cell | 3.67e-18 | 18 |
regulatory T cell | 7.84e-15 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.84e-15 | 2 |
naive regulatory T cell | 7.84e-15 | 2 |
T cell | 7.51e-13 | 25 |
pro-T cell | 7.51e-13 | 25 |
CD4-positive, alpha-beta thymocyte | 2.17e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.17e-08 | 1 |
mature CD4 single-positive thymocyte | 2.17e-08 | 1 |
resting double-positive thymocyte | 2.17e-08 | 1 |
double-positive blast | 2.17e-08 | 1 |
CD69-positive double-positive thymocyte | 2.17e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.17e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.17e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.17e-08 | 1 |
lymphoid lineage restricted progenitor cell | 1.98e-07 | 52 |
lymphocyte | 2.88e-07 | 53 |
common lymphoid progenitor | 2.88e-07 | 53 |