FFCP PHASE1:Hg19::chr19:14228521..14228536,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5566 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9380 | |||
|TSSclassifier=strong | |||
|UniProt=P17612 | |||
|association_with_transcript=22bp_to_ENST00000308677,NM_002730,uc002myc.2_5end | |||
|cluster_id=chr19:14228521..14228536,- | |||
|coexpression_cluster_id=C134 | |||
|description=CAGE_peak_2_at_PRKACA_5end | |||
|id=chr19:14228521..14228536,- | |||
|ontology_enrichment_celltype=CL:0002057!1.81e-12!42;CL:0000860!8.97e-12!45;CL:0000766!1.55e-09!76;CL:0002009!7.20e-09!65;CL:0002194!2.43e-08!63;CL:0000576!2.43e-08!63;CL:0000040!2.43e-08!63;CL:0000559!2.43e-08!63;CL:0000557!3.92e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-08;33!CL:0002057;1.16e-08;33!CL:0000473;2.70e-08;39!CL:0000234;2.70e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.63e-13,48;CL:0000234,3.63e-13,48;CL:0000860,1.55e-12,42;CL:0002057,1.55e-12,42;CL:0000766,4.42e-10,72;CL:0002009,1.56e-09,61;CL:0002194,5.57e-09,59;CL:0000576,5.57e-09,59;CL:0000040,5.57e-09,59;CL:0000559,5.57e-09,59;CL:0000557,1.48e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.76e-17!659;UBERON:0000922!8.95e-17!612;UBERON:0000467!9.40e-17!625;UBERON:0007023!1.05e-16!115;UBERON:0000480!1.54e-16!626;UBERON:0003081!3.15e-16!216;UBERON:0002050!4.43e-16!605;UBERON:0005423!4.43e-16!605;UBERON:0000923!1.02e-15!604;UBERON:0005291!1.02e-15!604;UBERON:0006598!1.02e-15!604;UBERON:0002532!1.02e-15!604;UBERON:0000025!8.67e-15!194;UBERON:0001009!9.71e-14!113;UBERON:0001017!1.11e-13!82;UBERON:0003075!1.24e-13!86;UBERON:0007284!1.24e-13!86;UBERON:0001049!1.31e-13!57;UBERON:0005068!1.31e-13!57;UBERON:0006241!1.31e-13!57;UBERON:0007135!1.31e-13!57;UBERON:0005743!1.41e-12!86;UBERON:0002346!2.12e-12!90;UBERON:0004535!2.21e-12!110;UBERON:0002616!2.43e-12!59;UBERON:0000955!4.34e-12!69;UBERON:0006238!4.34e-12!69;UBERON:0000477!1.05e-11!286;UBERON:0000073!3.37e-11!94;UBERON:0001016!3.37e-11!94;UBERON:0002204!7.44e-11!167;UBERON:0000479!8.22e-11!787;UBERON:0004111!2.88e-10!241;UBERON:0000119!1.48e-09!312;UBERON:0002780!1.58e-09!41;UBERON:0001890!1.58e-09!41;UBERON:0006240!1.58e-09!41;UBERON:0003080!1.85e-09!42;UBERON:0004872!2.60e-09!84;UBERON:0000483!2.91e-09!309;UBERON:0002049!6.07e-09!79;UBERON:0007798!6.07e-09!79;UBERON:0002020!7.65e-09!34;UBERON:0003528!7.65e-09!34;UBERON:0001869!1.64e-08!32;UBERON:0001893!1.75e-08!34;UBERON:0001981!2.70e-08!60;UBERON:0007500!2.70e-08!60;UBERON:0004537!2.70e-08!60;UBERON:0006965!2.70e-08!60;UBERON:0002791!4.92e-08!33;UBERON:0000055!5.58e-08!69;UBERON:0003056!7.06e-08!61;UBERON:0007100!7.12e-08!27;UBERON:0002193!7.15e-08!112;UBERON:0003914!7.52e-08!118;UBERON:0002390!1.53e-07!102;UBERON:0003061!1.53e-07!102;UBERON:0000926!1.63e-07!448;UBERON:0004120!1.63e-07!448;UBERON:0006603!1.63e-07!448;UBERON:0000956!2.03e-07!25;UBERON:0000203!2.03e-07!25;UBERON:0002405!2.20e-07!115;UBERON:0001637!4.91e-07!42;UBERON:0003509!4.91e-07!42;UBERON:0004572!4.91e-07!42;UBERON:0002619!5.50e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.21e-08;53!UBERON:0002616;4.21e-08;53!UBERON:0007100;1.28e-07;25!UBERON:0003528;1.38e-07;34!UBERON:0002020;1.38e-07;34!UBERON:0001869;1.46e-07;32!UBERON:0000956;1.75e-07;25!UBERON:0000203;1.75e-07;25!UBERON:0001893;2.64e-07;34!UBERON:0002791;2.84e-07;32!UBERON:0002780;4.49e-07;41!UBERON:0001890;4.49e-07;41!UBERON:0002619;4.82e-07;22 | |||
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| |||
|short_description=p2@PRKACA | |||
}} |
Latest revision as of 03:48, 16 September 2015
Short description: | p2@PRKACA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRKACA_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 22bp_to_ENST00000308677, NM_002730, uc002myc.2_5end |
EntrezGene: | PRKACA |
HGNC: | 9380 |
UniProt: | P17612 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.63e-13 | 48 |
phagocyte | 3.63e-13 | 48 |
classical monocyte | 1.55e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.55e-12 | 42 |
myeloid leukocyte | 4.42e-10 | 72 |
macrophage dendritic cell progenitor | 1.56e-09 | 61 |
monopoietic cell | 5.57e-09 | 59 |
monocyte | 5.57e-09 | 59 |
monoblast | 5.57e-09 | 59 |
promonocyte | 5.57e-09 | 59 |
granulocyte monocyte progenitor cell | 1.48e-07 | 67 |