FFCP PHASE1:Hg19::chr19:37407212..37407280,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374900 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25392 | |||
|TSSclassifier=strong | |||
|UniProt=Q3ZCX4,C9JZ58,C9JLX5,A2VDJ6,Q96AZ9,B4DS92,E7ER33 | |||
|association_with_transcript=0bp_to_ENST00000333987,ENST00000415168,ENST00000427117,ENST00000444991,NM_001204835,NM_001204836,NM_001204837,NM_001204838,NM_001204839,NM_198539,uc002ofc.2,uc002ofd.2,uc010efe.2,uc010eff.1,uc010efg.2,uc010xtn.1_5end | |||
|cluster_id=chr19:37407212..37407280,+ | |||
|description=CAGE_peak_1_at_ZNF568_5end | |||
|id=chr19:37407212..37407280,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.04e-28!115;UBERON:0001049!5.58e-22!57;UBERON:0005068!5.58e-22!57;UBERON:0006241!5.58e-22!57;UBERON:0007135!5.58e-22!57;UBERON:0002616!1.21e-19!59;UBERON:0000073!1.60e-19!94;UBERON:0001016!1.60e-19!94;UBERON:0001017!3.74e-18!82;UBERON:0005743!5.37e-18!86;UBERON:0002780!1.84e-17!41;UBERON:0001890!1.84e-17!41;UBERON:0006240!1.84e-17!41;UBERON:0002346!2.50e-17!90;UBERON:0003080!3.66e-17!42;UBERON:0003075!7.39e-17!86;UBERON:0007284!7.39e-17!86;UBERON:0000955!1.90e-16!69;UBERON:0006238!1.90e-16!69;UBERON:0000924!3.06e-15!173;UBERON:0006601!3.06e-15!173;UBERON:0004121!1.04e-14!169;UBERON:0002020!1.23e-13!34;UBERON:0003528!1.23e-13!34;UBERON:0001893!1.40e-13!34;UBERON:0000153!1.83e-13!129;UBERON:0007811!1.83e-13!129;UBERON:0002791!3.00e-13!33;UBERON:0000033!4.80e-13!123;UBERON:0001869!1.98e-12!32;UBERON:0003056!4.31e-11!61;UBERON:0000956!1.15e-10!25;UBERON:0000203!1.15e-10!25;UBERON:0002619!1.39e-10!22;UBERON:0001950!1.53e-09!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.45e-13;41!UBERON:0001890;1.45e-13;41!UBERON:0000073;4.10e-13;53!UBERON:0002616;4.10e-13;53!UBERON:0003528;7.11e-12;34!UBERON:0002020;7.11e-12;34!UBERON:0002791;1.03e-11;32!UBERON:0001893;1.38e-11;34!UBERON:0001869;1.76e-11;32!UBERON:0000956;6.84e-11;25!UBERON:0000203;6.84e-11;25!UBERON:0002619;9.68e-11;22!UBERON:0001950;1.19e-09;20!UBERON:0001016;3.23e-08;83!UBERON:0007023;3.81e-08;114!UBERON:0001017;4.13e-08;75!UBERON:0000955;1.05e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.36e-27,114;UBERON:0001049,1.98e-22,56;UBERON:0005068,1.98e-22,56;UBERON:0006241,1.98e-22,56;UBERON:0007135,1.98e-22,56;UBERON:0000073,7.82e-21,53;UBERON:0002616,7.82e-21,53;UBERON:0001016,6.09e-20,89;UBERON:0001017,2.00e-18,81;UBERON:0002346,2.89e-18,86;UBERON:0003075,8.30e-18,82;UBERON:0007284,8.30e-18,82;UBERON:0002780,1.36e-17,41;UBERON:0001890,1.36e-17,41;UBERON:0003080,1.36e-17,41;UBERON:0006240,1.36e-17,41;UBERON:0000955,1.20e-16,68;UBERON:0006238,1.20e-16,68;UBERON:0010314,3.74e-16,132;UBERON:0004121,7.27e-16,171;UBERON:0000924,7.27e-16,171;UBERON:0006601,7.27e-16,171;UBERON:0003528,9.81e-14,34;UBERON:0002020,9.81e-14,34;UBERON:0001893,1.11e-13,34;UBERON:0010371,3.36e-13,104;UBERON:0002791,8.29e-13,32;UBERON:0001869,1.61e-12,32;UBERON:0003056,7.48e-12,61;UBERON:0000956,9.65e-11,25;UBERON:0000203,9.65e-11,25;UBERON:0002619,1.17e-10,22;UBERON:0001950,1.32e-09,20 | |||
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| |||
|short_description=p1@ZNF568 | |||
}} |
Latest revision as of 17:23, 17 September 2015
Short description: | p1@ZNF568 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF568_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000333987, ENST00000415168, ENST00000427117, ENST00000444991, NM_001204835, NM_001204836, NM_001204837, NM_001204838, NM_001204839, NM_198539, uc002ofc.2, uc002ofd.2, uc010efe.2, uc010eff.1, uc010efg.2, uc010xtn.1_5end |
EntrezGene: | ZNF568 |
HGNC: | 25392 |
UniProt: | Q3ZCX4C9JZ58C9JLX5A2VDJ6Q96AZ9B4DS92E7ER33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.36e-27 | 114 |
neural tube | 1.98e-22 | 56 |
neural rod | 1.98e-22 | 56 |
future spinal cord | 1.98e-22 | 56 |
neural keel | 1.98e-22 | 56 |
regional part of nervous system | 7.82e-21 | 53 |
regional part of brain | 7.82e-21 | 53 |
nervous system | 6.09e-20 | 89 |
central nervous system | 2.00e-18 | 81 |
neurectoderm | 2.89e-18 | 86 |
neural plate | 8.30e-18 | 82 |
presumptive neural plate | 8.30e-18 | 82 |
regional part of forebrain | 1.36e-17 | 41 |
forebrain | 1.36e-17 | 41 |
anterior neural tube | 1.36e-17 | 41 |
future forebrain | 1.36e-17 | 41 |
brain | 1.20e-16 | 68 |
future brain | 1.20e-16 | 68 |
structure with developmental contribution from neural crest | 3.74e-16 | 132 |
ectoderm-derived structure | 7.27e-16 | 171 |
ectoderm | 7.27e-16 | 171 |
presumptive ectoderm | 7.27e-16 | 171 |
brain grey matter | 9.81e-14 | 34 |
gray matter | 9.81e-14 | 34 |
telencephalon | 1.11e-13 | 34 |
ecto-epithelium | 3.36e-13 | 104 |
regional part of telencephalon | 8.29e-13 | 32 |
cerebral hemisphere | 1.61e-12 | 32 |
pre-chordal neural plate | 7.48e-12 | 61 |
cerebral cortex | 9.65e-11 | 25 |
pallium | 9.65e-11 | 25 |
regional part of cerebral cortex | 1.17e-10 | 22 |
neocortex | 1.32e-09 | 20 |