FFCP PHASE1:Hg19::chr19:3971050..3971128,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1613 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2676 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000545797,uc002lzd.1_5end | |||
|cluster_id=chr19:3971050..3971128,- | |||
|coexpression_cluster_id=C3784 | |||
|description=CAGE_peak_1_at_DAPK3_5end | |||
|id=chr19:3971050..3971128,- | |||
|ontology_enrichment_celltype=CL:0002321!3.58e-27!248;CL:0000220!6.66e-27!246;CL:0000222!1.14e-25!119;CL:0000055!2.88e-23!180;CL:0000183!2.38e-15!59;CL:0000192!9.15e-15!42;CL:0000514!9.15e-15!42;CL:0000680!9.68e-14!57;CL:0000056!9.68e-14!57;CL:0000355!9.68e-14!57;CL:0000187!1.97e-13!54;CL:0000393!3.45e-13!60;CL:0000211!3.45e-13!60;CL:0000359!2.99e-12!32;CL:0002078!5.05e-12!44;CL:0000213!7.38e-11!57;CL:0000215!7.38e-11!57;CL:0000115!2.09e-10!35;CL:0002139!1.09e-09!24;CL:0000071!3.20e-08!18;CL:0002546!3.20e-08!18;CL:0000066!7.95e-08!254;CL:0000057!1.07e-07!75;CL:1000449!5.93e-07!16;CL:0000144!6.85e-07!625;CL:0000221!7.67e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.99e-11;32!CL:0000192;6.24e-11;43!CL:0002139;9.95e-10;24!CL:0000115;4.91e-09;36!CL:0002078;1.37e-08;45!CL:0000071;3.08e-08;18!CL:0000187;1.64e-07;55!CL:0000213;5.27e-07;58!CL:0000215;5.27e-07;58!CL:0000393;6.47e-07;61!CL:0000211;6.47e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.08e-27,250;CL:0000222,3.75e-26,121;CL:0000192,5.12e-15,43;CL:0000514,5.12e-15,43;CL:0000680,5.33e-14,58;CL:0000056,5.33e-14,58;CL:0000355,5.33e-14,58;CL:0000187,1.09e-13,55;CL:0000393,1.91e-13,61;CL:0000211,1.91e-13,61;CL:0000359,2.99e-12,32;CL:0002078,3.53e-12,45;CL:0000213,5.04e-11,58;CL:0000215,5.04e-11,58;CL:0000115,1.48e-10,36;CL:0002139,1.09e-09,24;CL:0000071,3.20e-08,18;CL:0002546,3.20e-08,18;CL:0000057,5.59e-08,76;CL:0000066,1.16e-07,253;CL:0000221,6.89e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000514;6.24e-11;43!CL:0002546;3.08e-08;18!CL:0000222;1.11e-07;121!CL:0000355;1.13e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.03e-24!79;UBERON:0007798!1.03e-24!79;UBERON:0004872!8.12e-23!84;UBERON:0000483!1.80e-22!309;UBERON:0000055!4.19e-22!69;UBERON:0000119!5.25e-22!312;UBERON:0003914!5.35e-21!118;UBERON:0001981!3.09e-20!60;UBERON:0007500!3.09e-20!60;UBERON:0004537!3.09e-20!60;UBERON:0006965!3.09e-20!60;UBERON:0001009!1.17e-18!113;UBERON:0005256!1.72e-18!143;UBERON:0004535!3.90e-18!110;UBERON:0000475!5.18e-17!365;UBERON:0000486!1.94e-16!82;UBERON:0001637!2.75e-16!42;UBERON:0003509!2.75e-16!42;UBERON:0004572!2.75e-16!42;UBERON:0000490!4.69e-16!138;UBERON:0000914!7.77e-16!83;UBERON:0002329!7.77e-16!83;UBERON:0003077!7.77e-16!83;UBERON:0003059!7.77e-16!83;UBERON:0007282!7.77e-16!83;UBERON:0009618!7.77e-16!83;UBERON:0007285!7.77e-16!83;UBERON:0000468!8.75e-16!659;UBERON:0002100!1.63e-14!216;UBERON:0002385!1.69e-14!63;UBERON:0001015!1.69e-14!63;UBERON:0000383!1.69e-14!63;UBERON:0000477!2.19e-14!286;UBERON:0004290!2.94e-14!70;UBERON:0001134!3.85e-14!61;UBERON:0002036!3.85e-14!61;UBERON:0003082!3.85e-14!61;UBERON:0000481!9.59e-14!347;UBERON:0004111!1.07e-13!241;UBERON:0000467!2.06e-12!625;UBERON:0000480!2.90e-12!626;UBERON:0004573!5.52e-12!33;UBERON:0004571!5.52e-12!33;UBERON:0000025!6.15e-12!194;UBERON:0003104!1.58e-09!238;UBERON:0009142!1.58e-09!238;UBERON:0000922!4.51e-09!612;UBERON:0003103!7.76e-09!69;UBERON:0006914!1.77e-08!25;UBERON:0002050!1.93e-08!605;UBERON:0005423!1.93e-08!605;UBERON:0000923!2.35e-08!604;UBERON:0005291!2.35e-08!604;UBERON:0006598!2.35e-08!604;UBERON:0002532!2.35e-08!604;UBERON:0000487!3.12e-08!22;UBERON:0001986!3.20e-08!18;UBERON:0004638!3.20e-08!18;UBERON:0004852!3.20e-08!18;UBERON:0000064!4.71e-08!219;UBERON:0000947!3.34e-07!21;UBERON:0010191!3.34e-07!21;UBERON:0003064!4.36e-07!37;UBERON:0000353!4.64e-07!17;UBERON:0004211!5.93e-07!16;UBERON:0001285!5.93e-07!16;UBERON:0007684!5.93e-07!16;UBERON:0003220!5.93e-07!16;UBERON:0004208!5.93e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.81e-12;42!UBERON:0003509;2.81e-12;42!UBERON:0004572;2.81e-12;42!UBERON:0007500;2.30e-11;56!UBERON:0001981;2.30e-11;56!UBERON:0004537;2.30e-11;56!UBERON:0003914;2.43e-11;74!UBERON:0004573;6.90e-11;33!UBERON:0004571;6.90e-11;33!UBERON:0000055;2.10e-10;65!UBERON:0002049;2.69e-10;75!UBERON:0007798;2.69e-10;75!UBERON:0006914;1.74e-08;25!UBERON:0000487;2.94e-08;22!UBERON:0004638;3.08e-08;18!UBERON:0001986;3.08e-08;18!UBERON:0004852;3.08e-08;18!UBERON:0000490;3.90e-08;33!UBERON:0000947;3.68e-07;21!UBERON:0010191;3.68e-07;21!UBERON:0000025;8.85e-07;93 | |||
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| |||
|short_description=p1@DAPK3 | |||
}} |
Latest revision as of 21:32, 17 September 2015
Short description: | p1@DAPK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DAPK3_5end |
Coexpression cluster: | C3784_Endothelial_Alveolar_Renal_Sebocyte_Fibroblast_Mesothelial_Prostate |
Association with transcript: | -12bp_to_ENST00000545797, uc002lzd.1_5end |
EntrezGene: | DAPK3 |
HGNC: | 2676 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.08e-27 | 250 |
mesodermal cell | 3.75e-26 | 121 |
smooth muscle cell | 5.12e-15 | 43 |
smooth muscle myoblast | 5.12e-15 | 43 |
muscle precursor cell | 5.33e-14 | 58 |
myoblast | 5.33e-14 | 58 |
multi-potent skeletal muscle stem cell | 5.33e-14 | 58 |
muscle cell | 1.09e-13 | 55 |
electrically responsive cell | 1.91e-13 | 61 |
electrically active cell | 1.91e-13 | 61 |
vascular associated smooth muscle cell | 2.99e-12 | 32 |
meso-epithelial cell | 3.53e-12 | 45 |
lining cell | 5.04e-11 | 58 |
barrier cell | 5.04e-11 | 58 |
endothelial cell | 1.48e-10 | 36 |
endothelial cell of vascular tree | 1.09e-09 | 24 |
blood vessel endothelial cell | 3.20e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.20e-08 | 18 |
fibroblast | 5.59e-08 | 76 |
epithelial cell | 1.16e-07 | 253 |
ectodermal cell | 6.89e-07 | 72 |