FFCP PHASE1:Hg19::chr19:40971610..40971624,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=645 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1063 | |||
|TSSclassifier=strong | |||
|UniProt=P30043 | |||
|association_with_transcript=100bp_to_ENST00000263368,NM_000713,uc002onw.2,uc010egw.1_5end | |||
|cluster_id=chr19:40971610..40971624,- | |||
|description=CAGE_peak_3_at_BLVRB_5end | |||
|id=chr19:40971610..40971624,- | |||
|ontology_enrichment_celltype=CL:0000192!1.97e-08!42;CL:0000514!1.97e-08!42;CL:0000055!1.79e-07!180;CL:0000359!2.12e-07!32;CL:0000012!2.88e-07!682;CL:0000548!5.33e-07!679;CL:0000004!5.33e-07!679;CL:0000255!5.33e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.92e-08;32!CL:0000192;9.01e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.02e-09,43;CL:0000514,6.02e-09,43;CL:0000359,6.33e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000514;9.01e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.36e-14!448;UBERON:0004120!3.36e-14!448;UBERON:0006603!3.36e-14!448;UBERON:0001637!3.28e-07!42;UBERON:0003509!3.28e-07!42;UBERON:0004572!3.28e-07!42;UBERON:0002204!7.26e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.67e-09,315;UBERON:0004120,3.67e-09,315;UBERON:0006603,3.67e-09,315;UBERON:0003081,2.92e-08,203;UBERON:0002204,5.00e-07,167;UBERON:0001637,6.45e-07,42;UBERON:0003509,6.45e-07,42;UBERON:0004572,6.45e-07,42 | |||
|phase1_expression=0.908391896352783,1.2846031433459,0.986680828671798,1.0007329835313,2.23480547213644,1.74467704820074,5.06599756336621,1.26343974685366,2.87304191019822,1.47440361900905,4.18680700783456,0.218441372130172,1.84636884759917,1.73272894144065,3.31397375727916,1.34465029290355,0.602694528023977,2.19093027116212,1.46379839637152,0.738726348460727,1.63200552995402,0.940364164434263,0.286235987131057,0.273748850145768,0.125542639594803,0.382067028739756,0.246301768349837,0.314843125254717,0,0.383829398097213,0.619264493264304,0.919421224478927,0.6024118375565,2.21852406100073,0.387336002901508,0.426507697462265,1.17440175733939,2.21598163412751,0.200544447470142,1.51907609501096,8.06095707263728,4.85840499028469,5.40908692031792,1.16318591023652,0,0.242584061187816,0.697287110717054,0.822335776043652,0.619412741790207,1.43846196161075,0.768482119587302,0.709446689665756,1.03423704220986,1.93645405075148,2.70852973188684,1.50593871634084,0.272906150057846,0.674170453335254,1.22433556948361,1.92557416245656,0.639337125799041,0.329851300186716,1.19678194572979,1.27867425159808,1.45104619314292,0,0,1.00499466102697,1.5644487552606,1.73751075764093,1.81619850790011,1.10483290796269,0,1.26753171787165,1.4882300997553,2.30624510059213,3.14520167210186,1.50176892841506,0.803627933485401,1.42506371870624,2.58591680358817,1.0959849225878,0,0,0,0,0.400395987036012,0,0,0,0,0,0,1.32171328579026,0.560508562981536,2.37045676297569,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0,0.260118695119756,0.493313713811028,1.10540007114339,1.15921234294021,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0.670700859703636,1.40648818027883,2.89151321907653,3.50936537445123,4.34539556882471,0.795285947051099,0.973269740605272,0.189069634328136,0.886917589850256,0.614843499851882,0.851363990735132,1.09288586487763,0.741568885568859,5.8418530857843,3.65672448328461,3.32394901297163,0,0,0,1.59009925893364,0,0.694281003215189,1.69592382577203,0.838998872419812,0.550236083880135,1.04497483268405,0.516833518338658,0,0,0.805658634218294,4.56163263431108,0.732186172644509,1.10298924103761,0.81014194788176,0.446498641420399,0.44905874525234,0.225222960966644,3.06633274931766,2.84779697870439,0.366403487860815,0,0,2.18047026071267,0,2.65924074495618,3.04541115870403,3.72887606973458,2.4826786753885,0.560677600142307,2.1349799145941,2.4666754841716,1.8672662123986,1.0776853765575,1.9615428373615,0.908144565869588,0.576175924479999,0.70296429550139,2.18512053781224,1.71141546463335,3.43731965269142,0.469737994575059,0.809364721840658,0,1.42907919878425,0.491337269247072,3.09977343527296,1.18800285728205,2.47266929278557,0.910161361938026,0.718618141816238,0.673344455816265,0.375355559615893,0.831192346452549,0.877955241761676,0.612975591598039,1.35214253015937,1.92834711372036,0.89694817844431,0.640672166455702,1.48352330811693,1.50045548042201,1.8549455262919,2.31876486041066,1.30281799432113,1.68776332241266,2.43592512902997,0.757301322732344,2.11714766877288,2.7479829659198,2.13005755509969,2.01504196455281,1.3564847384839,0.193260853163297,0.818238361772504,0.860413786167011,0.243947412259191,0,0.464775771478074,0.621966330092223,0.504641701751257,0.36497735907583,1.56449532329816,0,1.38134921352481,2.3218396401599,7.21879481669586,1.8929088006375,1.51726221070292,1.20505514941741,2.42646740011267,0.653638332277218,1.89816495288877,2.96628877952362,1.76599318612811,2.69323009862473,0.738155454624648,0,2.057870056657,1.47008711385542,5.07020139287323,1.96565443335525,0.590789906681404,0,1.10689594688802,0.171567810298526,0.98775256867763,1.1240175325762,0.402115889646523,1.75918045801206,3.25808305310325,1.03993478527958,0,0.463721619900307,0.587043471179108,0.144366447761074,2.77791307545966,1.52203321787679,3.1608175918371,7.72637545885385,4.92434012174795,1.8720341211139,3.56714789492948,0,0.839910640994298,0.850650583454319,1.34337784054272,0.871901815541886,0.766765358330422,0.492663237895943,0.176096868026452,0.207328115540772,0.288239906833923,1.00993946741104,0.380987365753014,0.763976851116555,3.51652341630141,3.4214489204541,0.822619941626588,0.600686115687835,0.285826432630578,0.112131084345361,0.87192013766656,0.51336800074665,1.03417372606222,14.3062578340753,0.845302752556,0.797814349754612,2.08014873822732,0.514414748524284,0,0.532844358032199,0.857867961948885,2.17048642156577,2.46972101034231,0.65147236858747,1.06617584622764,0,2.71295439353627,0.871533458600294,1.19967589418468,8.51366464488333,5.52482800575339,8.43335757932127,0.718874566474748,1.14861935834114,0,2.17171960001369,1.64381058040307,1.61154866915906,1.12085143993527,0.394061520403854,0.215627574859517,0.256686072559497,0.76228387266739,0,0,0.335032530668698,0.637938751653163,0,0,0,2.20844685094452,3.00102312635806,3.25518028439683,1.45579603071565,1.78428988797162,2.20783381047509,1.17141414992713,3.61135319673263,11.3703752027992,13.4514992680256,0.66422559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| |||
|short_description=p3@BLVRB | |||
}} |
Latest revision as of 02:09, 18 September 2015
Short description: | p3@BLVRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BLVRB_5end |
Coexpression cluster: | NA |
Association with transcript: | 100bp_to_ENST00000263368, NM_000713, uc002onw.2, uc010egw.1_5end |
EntrezGene: | BLVRB |
HGNC: | 1063 |
UniProt: | P30043 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.02e-09 | 43 |
smooth muscle myoblast | 6.02e-09 | 43 |
vascular associated smooth muscle cell | 6.33e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.67e-09 | 315 |
mesoderm-derived structure | 3.67e-09 | 315 |
presumptive mesoderm | 3.67e-09 | 315 |
lateral plate mesoderm | 2.92e-08 | 203 |
musculoskeletal system | 5.00e-07 | 167 |
artery | 6.45e-07 | 42 |
arterial blood vessel | 6.45e-07 | 42 |
arterial system | 6.45e-07 | 42 |