FFCP PHASE1:Hg19::chr19:41268880..41268892,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:41268880..41268892,+ | |||
|description=CAGE_peak_at_chr19:41268880..41268892,+ | |||
|id=chr19:41268880..41268892,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.37e-29;1!CL:0002625;2.37e-29;1!CL:0000216;2.37e-29;1!CL:0002262;2.05e-15;2!CL:1000398;2.05e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.78e-29,1;CL:0002625,1.78e-29,1;CL:0000216,1.78e-29,1;CL:0002262,2.05e-15,2;CL:1000398,2.05e-15,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!1.25e-08!22;UBERON:0000079!1.25e-08!22;UBERON:0003135!1.86e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.37e-29;1!UBERON:0001343;2.37e-29;1!UBERON:0004910;2.37e-29;1!UBERON:0004813;2.37e-29;1!UBERON:0001281;2.05e-15;2!UBERON:0003497;2.05e-15;2!UBERON:0003909;2.05e-15;2!UBERON:0003835;2.05e-15;2!UBERON:0004909;2.05e-15;2!UBERON:0000473;4.37e-15;8!UBERON:0003135;2.98e-11;11!UBERON:0001280;9.90e-11;3!UBERON:0004647;9.90e-11;3!UBERON:0005904;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.78e-29,1;UBERON:0001343,1.78e-29,1;UBERON:0004910,1.78e-29,1;UBERON:0005154,1.78e-29,1;UBERON:0005295,1.78e-29,1;UBERON:0004813,1.78e-29,1;UBERON:0005297,1.78e-29,1;UBERON:0005294,1.78e-29,1;UBERON:0010141,1.78e-29,1;UBERON:0005891,1.78e-29,1;UBERON:0004909,1.78e-15,2;UBERON:0001281,2.05e-15,2;UBERON:0003497,2.05e-15,2;UBERON:0003909,2.05e-15,2;UBERON:0003835,2.05e-15,2;UBERON:0000473,3.53e-15,8;UBERON:0003135,2.55e-11,11;UBERON:0001280,9.90e-11,3;UBERON:0004647,9.90e-11,3;UBERON:0005171,9.90e-11,3;UBERON:0005904,2.11e-08,4;UBERON:0000058,6.38e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0.853815942907168,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.621984346622316,0.432359860250884,0.50496973370552,0.063497894292169,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0,0.300946099727719,2.27407504055985,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.604297247958111,0.200506470303285,0.276242966807689,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.325378394664303,0,0,0.082509499920588,0,0,1.6068392984416,0.193341436584244,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0.23056390438806,0.628303510868405,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.176915129006678,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0.173559738335131,0,0,0.698906672968121,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.0882561266915003,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0.164831716762333,0.13480708770837,0,0,0,0,0.160753148465019,0.412618309791701,0.83088067605837,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0.258565912723101,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0.303298235083296,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0.098150233615243,0.243835849964539,0,0.205325613712494,0,0,0,0,0.118920090777569,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0.253397002022874,0.407955318967927,0.26721740526556,0,0.250707539292375,1.66713136080127,0.267964130156178,0,0.103432995861895,0.426467963801962,0,0.581300188524055,0,0.112131862580613,0.190941474834495,0,0,0,0.0673520530145875,0.286888821570705,0,0,0.106727345877715,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr19:41268880..41268892,+ | |||
}} |
Latest revision as of 07:57, 26 July 2015
Short description: | p@chr19:41268880..41268892, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:41268880..41268892, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.78e-29 | 1 |
seminiferous tubule epithelial cell | 1.78e-29 | 1 |
Sertoli cell | 1.78e-29 | 1 |
endothelial cell of sinusoid | 2.05e-15 | 2 |
endothelial cell of hepatic sinusoid | 2.05e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.78e-29 | 1 |
seminiferous tubule of testis | 1.78e-29 | 1 |
epithelium of male gonad | 1.78e-29 | 1 |
epithelial cord | 1.78e-29 | 1 |
sex cord | 1.78e-29 | 1 |
seminiferous tubule epithelium | 1.78e-29 | 1 |
testis sex cord | 1.78e-29 | 1 |
genital ridge | 1.78e-29 | 1 |
primitive sex cord of indifferent gonad | 1.78e-29 | 1 |
coelomic epithelium | 1.78e-29 | 1 |
epithelium of gonad | 1.78e-15 | 2 |
hepatic sinusoid | 2.05e-15 | 2 |
abdomen blood vessel | 2.05e-15 | 2 |
sinusoid | 2.05e-15 | 2 |
abdominal segment blood vessel | 2.05e-15 | 2 |
testis | 3.53e-15 | 8 |
male reproductive organ | 2.55e-11 | 11 |
liver parenchyma | 9.90e-11 | 3 |
liver lobule | 9.90e-11 | 3 |
hepatic duct | 9.90e-11 | 3 |
duct of male reproductive system | 2.11e-08 | 4 |
duct | 6.38e-07 | 19 |