FFCP PHASE1:Hg19::chr19:4455290..4455331,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80700 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14928 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BZV1 | |||
|association_with_transcript=0bp_to_ENST00000394765,NM_001171091,uc002mam.1_5end | |||
|cluster_id=chr19:4455290..4455331,- | |||
|description=CAGE_peak_2_at_UBXN6_5end | |||
|id=chr19:4455290..4455331,- | |||
|ontology_enrichment_celltype=CL:0000055!1.09e-22!180;CL:0000057!2.12e-21!75;CL:0000183!2.90e-15!59;CL:0000680!5.86e-14!57;CL:0000056!5.86e-14!57;CL:0000355!5.86e-14!57;CL:0000187!8.59e-14!54;CL:0000192!1.37e-11!42;CL:0000514!1.37e-11!42;CL:0000393!1.10e-10!60;CL:0000211!1.10e-10!60;CL:0000723!2.31e-09!436;CL:0000048!7.04e-09!430;CL:0000034!1.71e-08!444;CL:0002620!4.26e-08!23;CL:0002371!8.72e-08!591;CL:0000359!9.46e-08!32;CL:0000144!3.50e-07!625;CL:0000222!8.97e-07!119;CL:0002570!9.52e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000134;5.76e-09;55!CL:0002570;6.21e-09;8!CL:0000057;7.39e-09;73!CL:0002620;1.41e-08;23!CL:0000048;1.65e-08;58!CL:0000723;2.13e-08;61!CL:0000187;2.73e-08;55!CL:0000192;2.04e-07;43!CL:0002334;4.32e-07;12!CL:0002569;7.92e-07;6!CL:0000359;8.79e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.76e-21,76;CL:0000723,1.69e-18,433;CL:0000048,1.01e-17,427;CL:0000034,2.28e-17,441;CL:0000187,4.97e-14,55;CL:0000680,7.72e-14,58;CL:0000056,7.72e-14,58;CL:0000355,7.72e-14,58;CL:0000393,1.47e-11,61;CL:0000211,1.47e-11,61;CL:0002320,1.36e-10,361;CL:0000192,1.95e-10,43;CL:0000514,1.95e-10,43;CL:0002570,4.22e-09,8;CL:0000134,1.78e-08,354;CL:0002620,4.28e-08,23;CL:0000359,3.78e-07,32;CL:0002334,6.01e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000355;2.60e-08;58!CL:0000514;2.04e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.71e-20!83;UBERON:0002329!4.71e-20!83;UBERON:0003077!4.71e-20!83;UBERON:0003059!4.71e-20!83;UBERON:0007282!4.71e-20!83;UBERON:0009618!4.71e-20!83;UBERON:0007285!4.71e-20!83;UBERON:0004290!2.05e-16!70;UBERON:0000486!5.48e-15!82;UBERON:0005256!1.35e-13!143;UBERON:0002385!1.75e-13!63;UBERON:0001015!1.75e-13!63;UBERON:0000383!1.75e-13!63;UBERON:0001134!2.58e-13!61;UBERON:0002036!2.58e-13!61;UBERON:0003082!2.58e-13!61;UBERON:0000475!3.37e-12!365;UBERON:0003102!3.95e-11!95;UBERON:0002199!1.26e-09!45;UBERON:0002416!1.26e-09!45;UBERON:0002097!2.94e-08!40;UBERON:0002100!6.42e-08!216;UBERON:0001013!1.39e-07!14;UBERON:0000479!2.87e-07!787;UBERON:0000481!4.25e-07!347;UBERON:0004535!7.94e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.84e-09;14!UBERON:0002199;2.41e-08;46!UBERON:0002416;2.41e-08;46!UBERON:0002385;3.49e-08;31!UBERON:0001015;3.49e-08;31!UBERON:0000383;3.49e-08;31!UBERON:0003102;1.85e-07;50!UBERON:0002384;7.06e-07;198!UBERON:0002097;7.52e-07;41!UBERON:0003422;7.92e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,4.83e-16,71;UBERON:0003059,4.83e-16,71;UBERON:0007282,4.83e-16,71;UBERON:0004290,4.83e-16,71;UBERON:0009618,4.83e-16,71;UBERON:0003077,1.27e-15,72;UBERON:0007285,1.27e-15,72;UBERON:0007503,2.17e-15,78;UBERON:0007524,3.24e-15,73;UBERON:0000486,1.13e-14,83;UBERON:0001134,3.71e-13,62;UBERON:0002036,3.71e-13,62;UBERON:0003082,3.71e-13,62;UBERON:0002385,2.21e-12,64;UBERON:0001015,2.21e-12,64;UBERON:0000383,2.21e-12,64;UBERON:0002199,8.14e-11,46;UBERON:0002416,8.14e-11,46;UBERON:0003102,1.16e-10,99;UBERON:0005256,1.22e-10,122;UBERON:0002384,2.67e-10,371;UBERON:0003104,5.33e-10,160;UBERON:0009142,5.33e-10,160;UBERON:0001013,9.69e-10,14;UBERON:0002097,9.17e-09,41 | |||
|phase1_expression=0,2.99740733447376,0.704772020479856,2.00146596706261,0.446961094427288,1.74467704820074,0,12.6343974685366,1.30592814099919,0,0,0,0.527533956456907,1.8564952944007,1.98838425436749,0,3.01347264011988,1.46062018077475,2.43966399395253,0.246242116153576,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,2.75826367343678,1.204823675113,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.15076305659177,0.722878304769133,2.50668955317945,0.579386075843295,0.795285947051099,0,0.567208902984407,0.443458794925128,0.43917392846563,0.0654895377488563,1.09288586487763,1.48313777113772,0,0,0,0.238490624305342,0,0,0,0.860234595106124,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,2.25095607382472,0.286836620748814,1.41867352879343,0,0,0.49333509683432,1.8672662123986,0.942974704487816,0.653847612453835,2.4217188423189,1.15235184896,1.17160715916898,1.87296046098192,7.41613368007784,4.93180645820944,1.05691048779388,0.161872944368132,0.842704840213491,4.08308342509786,1.10550885580591,3.40975077880026,0,2.71993622206413,4.55080680969013,10.7792721272436,1.34668891163253,0.750711119231785,2.49357703935765,3.07284334616587,1.83892677479412,1.50238058906597,0.567160915800105,1.25572744982203,1.06778694409284,3.17897851739343,1.20036438433761,1.44273540933814,2.06112432036503,1.8611685633159,2.02531598689519,0.487185025805993,2.27190396819703,1.19664868234989,1.2931684545505,1.06502877754984,0.705264687593482,1.69560592310488,0.773043412653187,1.36373060295417,1.14721838155602,0,0,0,0,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0.464367928031979,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,8.231480226628,5.88034845542168,0,0,0,0,0,0.686271241194102,1.75600456653801,1.1240175325762,3.01586917234893,0.277765335475589,0,7.27954349695705,1.44331342025273,0.695582429850461,0.117408694235822,0,0,0,0,0,0,0,0,1.87467667973554,0.839910640994298,0.425325291727159,0,0,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,1.90622843387113,0.43596006883328,1.1734125731352,2.19761916788222,7.15312891703765,5.917119267892,2.92531928243358,3.12022310734098,0.771622122786426,1.41849132023278,0.532844358032199,1.71573592389777,2.17048642156577,9.05564370458846,6.5147236858747,1.77695974371273,2.37585561880029,3.31583314765545,3.48613383440118,1.99945982364114,0,0,0,3.11512312139057,4.59447743336456,0,3.76431397335706,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,2.50085260529839,2.71265023699736,1.24782516918484,1.24900292158013,0.473107245101804,1.17141414992713,0,0,0,0.664225598535437,0.737476674166813,1.30325421702124,3.72022199179207,1.71571711905428,0.206768026122887,0.215714200818617,0,0,0,0.30239029332968,1.24053903909388,0.306923946576125,2.24528075546459,1.02511319404561,1.53512174720011,0.482561763430822,2.96836132889982,2.46735510084249,4.97172830876756,4.10635780069046,5.19254429183621,3.60252173225874,0,0.601519410909855,0.0920809889358963,1.49258782613989,3.82391452814106,1.83574180943194,0.902399225814824,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0.647747748306418,0,3.52230368807009,4.01351819083883,0.509752546090077,0,0.671624264166535,18.4178296382585,32.1565604760628,0,0,0,0.103041011647722,0,0,0.574265537996172,1.95018073810956,0,1.16004861950546,1.69453478826109,1.5350367472613,1.10269257987624,2.25582514223375,2.17525040871343,1.27839941124151,1.24644849905432,0.165284915360978,0.192190067365106,0.382838137483752,0,1.85938219718914,1.25924938732256,0.6970372701606,4.00443654228915,3.19383618190213,5.21959795245044,0,0,4.83805880167568,0.316379424718726,1.5250415513906,1.535386747868,0.855877976067841,7.00047145437061,0.78494864019923,2.69808686374972,2.19629623788844,2.35624804691373,2.42618977887979,1.58510321173008,0.842516912477962,5.85160486907508,2.19342140668156,3.16950440270266,1.50149902548784,1.83827061539827,3.39024349860728,2.75682671773062,0,0,4.05142873986681,0.655894752046633,0,0.30982349809975,0.563391205064483,1.86434757865267,3.92996164052485,0.35667105148125,0.354761064070598,1.05553817648832,2.63435914367922,1.51789269506286,0.699869440489966,0.192444225451024,0.670302275535787,0,0,0,0,0.443430153536676,0,12.1787426215721,22.9391162142713,20.5072987382699,3.09701308095126,3.70226045777575,12.9694662238543,16.2009431171434,20.621254583651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01131113011436,0,5.67956924799565,0,2.81974010175699,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0,0,0,0,0,4.97663340258892,0,0,0,0.197286811273867,9.57932369387759,0,0,0.185536196323703,0,0,0,0,0.227586896570999,0,0,0,0,0,0,1.08536794762867,0,0.110579259931225,0,0.219385397153973,0,0,0.538651809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| |||
|short_description=p2@UBXN6 | |||
}} |
Latest revision as of 12:55, 18 September 2015
Short description: | p2@UBXN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UBXN6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000394765, NM_001171091, uc002mam.1_5end |
EntrezGene: | UBXN6 |
HGNC: | 14928 |
UniProt: | Q9BZV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.76e-21 | 76 |
somatic stem cell | 1.69e-18 | 433 |
multi fate stem cell | 1.01e-17 | 427 |
stem cell | 2.28e-17 | 441 |
muscle cell | 4.97e-14 | 55 |
muscle precursor cell | 7.72e-14 | 58 |
myoblast | 7.72e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.72e-14 | 58 |
electrically responsive cell | 1.47e-11 | 61 |
electrically active cell | 1.47e-11 | 61 |
connective tissue cell | 1.36e-10 | 361 |
smooth muscle cell | 1.95e-10 | 43 |
smooth muscle myoblast | 1.95e-10 | 43 |
mesenchymal stem cell of adipose | 4.22e-09 | 8 |
mesenchymal cell | 1.78e-08 | 354 |
skin fibroblast | 4.28e-08 | 23 |
vascular associated smooth muscle cell | 3.78e-07 | 32 |
preadipocyte | 6.01e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
somite | 4.83e-16 | 71 |
presomitic mesoderm | 4.83e-16 | 71 |
presumptive segmental plate | 4.83e-16 | 71 |
dermomyotome | 4.83e-16 | 71 |
trunk paraxial mesoderm | 4.83e-16 | 71 |
paraxial mesoderm | 1.27e-15 | 72 |
presumptive paraxial mesoderm | 1.27e-15 | 72 |
epithelial vesicle | 2.17e-15 | 78 |
dense mesenchyme tissue | 3.24e-15 | 73 |
multilaminar epithelium | 1.13e-14 | 83 |
skeletal muscle tissue | 3.71e-13 | 62 |
striated muscle tissue | 3.71e-13 | 62 |
myotome | 3.71e-13 | 62 |
muscle tissue | 2.21e-12 | 64 |
musculature | 2.21e-12 | 64 |
musculature of body | 2.21e-12 | 64 |
integument | 8.14e-11 | 46 |
integumental system | 8.14e-11 | 46 |
surface structure | 1.16e-10 | 99 |
trunk mesenchyme | 1.22e-10 | 122 |
connective tissue | 2.67e-10 | 371 |
mesenchyme | 5.33e-10 | 160 |
entire embryonic mesenchyme | 5.33e-10 | 160 |
adipose tissue | 9.69e-10 | 14 |
skin of body | 9.17e-09 | 41 |