FFCP PHASE1:Hg19::chr19:47910182..47910187,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56917 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29537 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-394bp_to_ENST00000559890_5end | |||
|cluster_id=chr19:47910182..47910187,- | |||
|description=CAGE_peak_3_at_MEIS3_5end | |||
|id=chr19:47910182..47910187,- | |||
|ontology_enrichment_celltype=CL:0000055!5.29e-20!180;CL:0000057!1.83e-15!75;CL:0000499!1.70e-07!27;CL:0002620!2.52e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.35e-08;3!CL:0000388;2.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.66e-08,3;CL:0000388,1.66e-08,3;CL:0000057,9.89e-08,76;CL:0000540,5.04e-07,6;CL:0000031,5.04e-07,6;CL:0000404,5.04e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.10e-08!22;UBERON:0000475!1.66e-08!365;UBERON:0001950!1.11e-07!20;UBERON:0000956!2.20e-07!25;UBERON:0000203!2.20e-07!25;UBERON:0002199!6.38e-07!45;UBERON:0002416!6.38e-07!45;UBERON:0001017!8.69e-07!82;UBERON:0001893!9.81e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.35e-08;3!UBERON:0000043;2.35e-08;3!UBERON:0007845;2.35e-08;3!UBERON:0002619;4.39e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.66e-08,3;UBERON:0000043,1.66e-08,3;UBERON:0007845,1.66e-08,3;UBERON:0002619,3.86e-07,22 | |||
|phase1_expression=0.908391896352783,1.07050261945492,0.281908808191942,3.00219895059391,1.78784437770915,5.23403114460221,2.53299878168311,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,2.01697543935533,1.20538905604795,1.46062018077475,0.975865597581014,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,1.44575660953827,1.00267582127178,0.724232594804119,0,0.973269740605272,0,0,0,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.662045904066094,0.573673241497627,0,1.12135520028461,0,0.49333509683432,0.311211035399766,0,0.163461903113459,0.302714855289863,0,0,0,0,1.64393548606981,0.23486899728753,0.161872944368132,0.280901613404497,0,0.368502951935304,0.619954687054593,1.18800285728205,1.23633464639278,0.910161361938026,0.718618141816238,0,0.375355559615893,0.277064115484183,2.63386572528503,1.83892677479412,0.45071417671979,0,0.538168907066586,1.2813443329114,1.27159140695737,0.600182192168805,0.92747276314595,0.515281080091258,0.558350568994769,0.506328996723799,1.26668106709558,0.504867548488229,0.368199594569197,1.2931684545505,1.06502877754984,1.20902517873168,0.67824236924195,0,0,0,0.243947412259191,0,0.580969714347592,0.414644220061482,0.756962552626885,0.72995471815166,0,0,0,1.39310378409594,0.721879481669586,0.473227200159376,0,0,0,0,0,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0.122988438543114,0.514703430895577,0.329250856225877,0,0.100528972411631,0.0925884451585296,0,0,0,0.463721619900307,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,1.17587489739202,0,0.358234090811393,0,0,0,0,0,0,0,1.07946420296687,0.381988425558278,0,1.71072446022705,0.925447434329912,0.901029173531752,1.71495859578347,0.336393253036082,0.43596006883328,0.80672114403045,0.646358578788889,0,1.690605505112,0.797814349754612,3.12022310734098,0,0,1.0656887160644,1.14382394926518,1.08524321078289,0,0,0.710783897485092,0,0.602878754119172,0.871533458600294,1.19967589418468,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,1.54657762555539,0.502548796003046,1.27587750330633,0,0,0,0.36807447515742,0.500170521059677,0,1.45579603071565,4.10386674233472,1.41932173530541,0.468565659970853,0,0,0,0,0,0.695068915744663,1.17480694477644,0.343143423810856,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,0.496215615637554,0.61384789315225,2.52594084989766,0.640695746278505,1.02341449813341,0.64341568457443,1.48418066444991,0.771048469013278,1.06537035187876,0.0821271560138091,1.55776328755086,0.232420756919918,0.362578348774867,1.60405176242628,0.0920809889358963,0.229628896329213,0.910455840033585,1.70461739447251,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.386682873168488,0.308097234229289,0,0.137836572484531,0.322260734604821,0.870100163485371,0.170453254832202,0.534192213880424,0.330569830721956,0,0,0,4.18360994367557,1.5740617341532,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0.539617372749944,0.274537029736055,0.589062011728432,0,0,0.421258456238981,0.975267478179181,0.487426979262569,0,0.545999645631943,1.83827061539827,1.13008116620243,1.10273068709225,0.66343897524122,0,0,0,0.202910376962704,0,0.281695602532241,0,0.196498082026242,0.35667105148125,0,0.633322905892992,1.31717957183961,0,0.699869440489966,0.0962221127255121,0,0,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.36408156524854,0,0,0.23874448473769,0,0,0,0.562677665642051,0.445234820091624,0,0,0,0,0,0.102268682502155,0,1.24415835064723,0,0,0.511572370226872,0.394573622547734,0,1.11136990144637,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0.236387681767936,0,0,1.38899995946634,0,0,0,0.663475559587348,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0.23056390438806,0,0,0,0.732780747214898,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,1.83643656978294,0.063186579628488,0.150323419414493,0,0,0,0,0,0.284609546029793,0.970722711091971,0.347119476670262,0,0.0870592065804026,0,0,0.19351266257817,0.146178634172371,0.328461828212837,0,0.176512253383001,0.451961481561065,0.137041924646751,0,1.13959432720582,0,0.160317640503067,0,0.999048047910651,0,0,0,0,0.248505071130865,0.235694034616795,0.135904206073614,0.104602846312333,0.407992870545287,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0.201550417460179,0.3602998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| |||
|short_description=p3@MEIS3 | |||
}} |
Latest revision as of 23:46, 18 September 2015
Short description: | p3@MEIS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MEIS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -394bp_to_ENST00000559890_5end |
EntrezGene: | MEIS3 |
HGNC: | 29537 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.66e-08 | 3 |
tendon cell | 1.66e-08 | 3 |
fibroblast | 9.89e-08 | 76 |
neuron | 5.04e-07 | 6 |
neuroblast | 5.04e-07 | 6 |
electrically signaling cell | 5.04e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.66e-08 | 3 |
tendon | 1.66e-08 | 3 |
regular connective tissue | 1.66e-08 | 3 |
regional part of cerebral cortex | 3.86e-07 | 22 |