FFCP PHASE1:Hg19::chr19:50270219..50270319,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=160 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=561 | |||
|TSSclassifier=strong | |||
|UniProt=O95782 | |||
|association_with_transcript=39bp_to_ENST00000354293,ENST00000359032,NM_014203,NM_130787,uc002ppn.2,uc002ppo.2,uc010enj.1_5end | |||
|cluster_id=chr19:50270219..50270319,+ | |||
|coexpression_cluster_id=C1060 | |||
|description=CAGE_peak_1_at_AP2A1_5end | |||
|id=chr19:50270219..50270319,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.86e-25!180;CL:0000183!5.03e-18!59;CL:0000222!9.61e-18!119;CL:0000680!1.13e-16!57;CL:0000056!1.13e-16!57;CL:0000355!1.13e-16!57;CL:0000187!6.45e-16!54;CL:0000192!5.21e-14!42;CL:0000514!5.21e-14!42;CL:0000393!5.48e-14!60;CL:0000211!5.48e-14!60;CL:0000220!6.18e-12!246;CL:0000359!6.95e-12!32;CL:0002321!1.55e-11!248;CL:0000057!2.09e-10!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.19e-11;32!CL:0000192;1.40e-10;43!CL:0000187;3.76e-09;55!CL:0000393;2.14e-07;61!CL:0000211;2.14e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.99e-18,121;CL:0000680,7.46e-17,58;CL:0000056,7.46e-17,58;CL:0000355,7.46e-17,58;CL:0000187,4.30e-16,55;CL:0000192,3.56e-14,43;CL:0000514,3.56e-14,43;CL:0000393,3.58e-14,61;CL:0000211,3.58e-14,61;CL:0000359,6.95e-12,32;CL:0002321,7.48e-12,250;CL:0000057,1.41e-10,76 | |||
|ontology_enrichment_development_v019=CL:0000514;1.40e-10;43!CL:0000355;4.84e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!1.18e-20!113;UBERON:0000119!2.04e-20!312;UBERON:0004535!3.43e-20!110;UBERON:0000483!6.07e-20!309;UBERON:0000486!6.75e-19!82;UBERON:0000475!1.48e-18!365;UBERON:0004290!2.47e-18!70;UBERON:0000914!4.97e-18!83;UBERON:0002329!4.97e-18!83;UBERON:0003077!4.97e-18!83;UBERON:0003059!4.97e-18!83;UBERON:0007282!4.97e-18!83;UBERON:0009618!4.97e-18!83;UBERON:0007285!4.97e-18!83;UBERON:0001134!2.62e-17!61;UBERON:0002036!2.62e-17!61;UBERON:0003082!2.62e-17!61;UBERON:0004872!7.86e-17!84;UBERON:0002385!2.30e-16!63;UBERON:0001015!2.30e-16!63;UBERON:0000383!2.30e-16!63;UBERON:0005256!3.62e-16!143;UBERON:0002049!8.24e-16!79;UBERON:0007798!8.24e-16!79;UBERON:0003914!5.76e-15!118;UBERON:0000468!3.85e-14!659;UBERON:0000025!4.17e-13!194;UBERON:0001981!5.43e-13!60;UBERON:0007500!5.43e-13!60;UBERON:0004537!5.43e-13!60;UBERON:0006965!5.43e-13!60;UBERON:0001637!6.10e-13!42;UBERON:0003509!6.10e-13!42;UBERON:0004572!6.10e-13!42;UBERON:0000055!6.91e-13!69;UBERON:0000490!2.69e-12!138;UBERON:0002100!6.41e-12!216;UBERON:0004111!1.22e-11!241;UBERON:0000467!5.81e-11!625;UBERON:0000477!6.25e-11!286;UBERON:0000480!9.98e-11!626;UBERON:0004573!3.13e-10!33;UBERON:0004571!3.13e-10!33;UBERON:0000481!3.50e-10!347;UBERON:0002050!8.89e-09!605;UBERON:0005423!8.89e-09!605;UBERON:0000923!9.53e-09!604;UBERON:0005291!9.53e-09!604;UBERON:0006598!9.53e-09!604;UBERON:0002532!9.53e-09!604;UBERON:0000922!3.02e-08!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.94e-09;42!UBERON:0003509;2.94e-09;42!UBERON:0004572;2.94e-09;42!UBERON:0004573;3.41e-09;33!UBERON:0004571;3.41e-09;33!UBERON:0007500;6.99e-08;56!UBERON:0001981;6.99e-08;56!UBERON:0004537;6.99e-08;56!UBERON:0003914;3.78e-07;74!UBERON:0002049;8.74e-07;75!UBERON:0007798;8.74e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.58e-21,309;UBERON:0000483,7.83e-21,306;UBERON:0007503,8.89e-21,78;UBERON:0001009,1.85e-20,112;UBERON:0004535,5.36e-20,109;UBERON:0000486,4.32e-19,83;UBERON:0007524,7.51e-19,73;UBERON:0003077,1.12e-18,72;UBERON:0007285,1.12e-18,72;UBERON:0002329,1.60e-18,71;UBERON:0003059,1.60e-18,71;UBERON:0007282,1.60e-18,71;UBERON:0004290,1.60e-18,71;UBERON:0009618,1.60e-18,71;UBERON:0001134,1.73e-17,62;UBERON:0002036,1.73e-17,62;UBERON:0003082,1.73e-17,62;UBERON:0004872,1.20e-16,83;UBERON:0002385,1.50e-16,64;UBERON:0001015,1.50e-16,64;UBERON:0000383,1.50e-16,64;UBERON:0003104,4.85e-16,160;UBERON:0009142,4.85e-16,160;UBERON:0002049,1.25e-15,78;UBERON:0007798,1.25e-15,78;UBERON:0003914,8.95e-15,117;UBERON:0005256,1.48e-14,122;UBERON:0000490,9.97e-14,148;UBERON:0000025,5.67e-13,192;UBERON:0001637,6.10e-13,42;UBERON:0003509,6.10e-13,42;UBERON:0004572,6.10e-13,42;UBERON:0007500,8.11e-13,59;UBERON:0001981,8.11e-13,59;UBERON:0004537,8.11e-13,59;UBERON:0006965,8.11e-13,59;UBERON:0000055,1.04e-12,68;UBERON:0004111,1.17e-11,240;UBERON:0002100,8.13e-11,199;UBERON:0004573,3.13e-10,33;UBERON:0004571,3.13e-10,33;UBERON:0005423,1.53e-09,581;UBERON:0000926,8.12e-09,315;UBERON:0004120,8.12e-09,315;UBERON:0006603,8.12e-09,315;UBERON:0000923,1.36e-08,560;UBERON:0010316,1.36e-08,560;UBERON:0005291,1.36e-08,560;UBERON:0006598,1.36e-08,560;UBERON:0010317,1.36e-08,560;UBERON:0002532,1.36e-08,560;UBERON:0002050,2.04e-08,564;UBERON:0000922,5.22e-08,592;UBERON:0010314,8.11e-08,132;UBERON:0000479,3.04e-07,773 | |||
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| |||
|short_description=p1@AP2A1 | |||
}} |
Latest revision as of 08:53, 19 September 2015
Short description: | p1@AP2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AP2A1_5end |
Coexpression cluster: | C1060_Mesenchymal_Pericytes_Fibroblast_occipital_Renal_temporal_Nucleus |
Association with transcript: | 39bp_to_ENST00000354293, ENST00000359032, NM_014203, NM_130787, uc002ppn.2, uc002ppo.2, uc010enj.1_5end |
EntrezGene: | AP2A1 |
HGNC: | 561 |
UniProt: | O95782 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.99e-18 | 121 |
muscle precursor cell | 7.46e-17 | 58 |
myoblast | 7.46e-17 | 58 |
multi-potent skeletal muscle stem cell | 7.46e-17 | 58 |
muscle cell | 4.30e-16 | 55 |
smooth muscle cell | 3.56e-14 | 43 |
smooth muscle myoblast | 3.56e-14 | 43 |
electrically responsive cell | 3.58e-14 | 61 |
electrically active cell | 3.58e-14 | 61 |
vascular associated smooth muscle cell | 6.95e-12 | 32 |
embryonic cell | 7.48e-12 | 250 |
fibroblast | 1.41e-10 | 76 |