FFCP PHASE1:Hg19::chr19:6109227..6109241,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:6109227..6109241,+ | |||
|description=CAGE_peak_at_chr19:6109227..6109241,+ | |||
|id=chr19:6109227..6109241,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.69e-08!23;CL:0000453!7.06e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.99e-15;5!CL:0000151;3.34e-13;36!CL:0002623;7.70e-12;3!CL:0000153;1.21e-08;9!CL:0000447;1.21e-08;9!CL:0000163;1.40e-08;9!CL:0000622;1.91e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.50e-15,5;CL:0002028,7.50e-15,5;CL:0000151,3.35e-13,36;CL:0002623,1.22e-11,3;CL:0000153,9.81e-09,9;CL:0000447,9.81e-09,9;CL:0000163,1.74e-08,9;CL:0000622,2.51e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.26e-09;1!UBERON:0004874;3.00e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;7.96e-10;1!DOID:4549;7.96e-10;1!DOID:5861;7.96e-10;1!DOID:6496;7.96e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.98e-10,1;DOID:4549,7.98e-10,1;DOID:5861,7.98e-10,1;DOID:6496,7.98e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.29e-13!115;UBERON:0004733!4.90e-07!12;UBERON:0002028!4.90e-07!12;UBERON:0007277!4.90e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.26e-09;1!UBERON:0006834;3.00e-09;1!UBERON:0000989;3.00e-09;1!UBERON:0002146;3.00e-09;1!UBERON:0008811;3.00e-09;1!UBERON:0005623;3.00e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,1.12e-09,1;UBERON:0007645,1.12e-09,1;UBERON:0007647,1.12e-09,1;UBERON:0010115,1.12e-09,1;UBERON:0002146,1.56e-09,1;UBERON:0005623,1.56e-09,1;UBERON:0006834,2.16e-09,1;UBERON:0000989,2.77e-09,1;UBERON:0008811,2.77e-09,1;UBERON:0006258,2.77e-09,1;UBERON:0005876,2.77e-09,1;UBERON:0004874,2.77e-09,1 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,0.434539556882471,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.640672166455702,0,0.300091096084402,0.206105058476878,1.28820270022815,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0.184099797284599,4.68773564774555,1.77504796258307,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0.492663237895943,0,1.03664057770386,1.29707958075265,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,2.29723871668228,0,0,0,0,0,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.356857977594324,0.473107245101804,0.234282829985426,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,1.07423381301644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68886108238131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,1.53580351049616,0,0,0,0,0,1.59398390600856,0.552567831062295,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,3.05163472634166,0.442317039724898,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.22206028986725,0,0.247127877893006,0,0,0,0,0,0,0,0,1.20990716048664,0,2.40109002588254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,9.61991780937353,0.677942222341597,0,0,0,0,0,0.85381197895741,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,1.83328339209347,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.899895566206002,2.32140586367385,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0.573409195690071,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0.363697318405119,0,0.464033759878494,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0.358177682162975,0,0,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0.265729680626726,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,1.48863353516788,0.175871244359621,0,0,0,0,0,0,0,0.342976018874837,0.135939465953663,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,1.0243108625637,4.14755797088455,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.385870790539723,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,1.0580536810308,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0.639701945702943,0.23806443146374,0,0.0620747142958579,0.112131862580613,0,0,0.435433495793923,0,0.0673520530145875,0.0717222053926763,0.665320713092027,0,0,0,0,0,1.58913877437726,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p@chr19:6109227..6109241,+ | |||
}} |
Latest revision as of 18:02, 27 July 2015
Short description: | p@chr19:6109227..6109241, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6109227..6109241, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.50e-15 | 5 |
basophil mast progenitor cell | 7.50e-15 | 5 |
secretory cell | 3.35e-13 | 36 |
acinar cell of salivary gland | 1.22e-11 | 3 |
GAG secreting cell | 9.81e-09 | 9 |
carbohydrate secreting cell | 9.81e-09 | 9 |
endocrine cell | 1.74e-08 | 9 |
acinar cell | 2.51e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dura mater | 1.12e-09 | 1 |
future meninx | 1.12e-09 | 1 |
ectomeninx | 1.12e-09 | 1 |
future dura mater | 1.12e-09 | 1 |
pulmonary valve | 1.56e-09 | 1 |
semi-lunar valve | 1.56e-09 | 1 |
uterus or analog | 2.16e-09 | 1 |
penis | 2.77e-09 | 1 |
intromittent organ | 2.77e-09 | 1 |
lateral plate mesenchyme | 2.77e-09 | 1 |
undifferentiated genital tubercle | 2.77e-09 | 1 |
somatopleure | 2.77e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.98e-10 | 1 |
extraosseous chondrosarcoma | 7.98e-10 | 1 |
myxoid chondrosarcoma | 7.98e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 7.98e-10 | 1 |