FFCP PHASE1:Hg19::chr1:109235418..109235439,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55119 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25512 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=455bp_to_ENST00000370021_5end | |||
|cluster_id=chr1:109235418..109235439,+ | |||
|description=CAGE_peak_13_at_PRPF38B_5end | |||
|id=chr1:109235418..109235439,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.66e-28!172;CL:0000566!1.66e-28!172;CL:0000988!1.06e-26!182;CL:0000738!2.30e-24!140;CL:0002032!2.36e-24!165;CL:0000837!2.36e-24!165;CL:0002031!1.17e-17!124;CL:0002087!6.47e-17!119;CL:0000763!4.77e-13!112;CL:0000049!4.77e-13!112;CL:0000542!1.95e-11!53;CL:0000051!1.95e-11!53;CL:0000838!3.05e-11!52;CL:0000084!6.35e-10!25;CL:0000827!6.35e-10!25;CL:0000766!1.41e-08!76;CL:0000860!3.24e-08!45;CL:0000557!6.88e-08!71;CL:0002057!6.89e-08!42;CL:0000791!7.14e-07!18;CL:0000789!7.14e-07!18;CL:0002420!7.14e-07!18;CL:0002419!7.14e-07!18;CL:0000790!7.14e-07!18;CL:0000839!9.34e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.06e-12;3!CL:0000791;9.52e-12;18!CL:0000789;9.52e-12;18!CL:0002419;9.52e-12;18!CL:0000084;3.18e-10;25!CL:0000625;5.20e-08;11!CL:0000094;7.68e-08;8!CL:0000542;8.58e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.86e-16,136;CL:0000037,7.89e-15,168;CL:0000988,1.08e-13,177;CL:0000623,9.14e-13,3;CL:0000825,9.14e-13,3;CL:0000791,3.86e-12,18;CL:0000789,3.86e-12,18;CL:0002420,3.86e-12,18;CL:0002419,3.86e-12,18;CL:0000790,3.86e-12,18;CL:0000838,7.37e-11,52;CL:0000542,1.35e-10,53;CL:0000051,1.35e-10,53;CL:0000084,1.97e-10,25;CL:0000827,1.97e-10,25;CL:0002032,3.25e-10,161;CL:0000837,3.25e-10,161;CL:0002031,1.57e-08,120;CL:0000625,3.12e-08,11;CL:0002087,5.30e-08,115;CL:0000094,7.95e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000790;9.52e-12;18!CL:0000051;8.58e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!2.00e-08!51;DOID:0060083!2.00e-08!51;DOID:1240!7.58e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.43e-13!102;UBERON:0003061!3.43e-13!102;UBERON:0002193!1.97e-12!112;UBERON:0000178!1.25e-08!15;UBERON:0000179!1.25e-08!15;UBERON:0000463!1.25e-08!15;UBERON:0001474!4.70e-07!86;UBERON:0002371!5.12e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.84e-11;15!UBERON:0000179;6.84e-11;15!UBERON:0000463;6.84e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.80e-11,15;UBERON:0000179,5.80e-11,15;UBERON:0000463,5.80e-11,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.157421562627358,0,3.45446458287491,1.08371286321253,0,0,0,0.232401601740905,0.142169232487422,1.17440175733939,1.10799081706375,1.60435557976113,2.17010870715852,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0.411167888021826,0.619412741790207,0.575384784644301,0.512321413058201,0.236482229888585,0.344745680736619,0,4.06279459783025,0,0.272906150057846,0.449446968890169,0.612167784741805,0.962787081228281,0,0.659702600373432,0.199463657621632,0.426224750532694,0,0.56738522469114,0,0,0.521482918420201,0.65156653411535,0,0.368277635987565,0,0.422510572623884,0.212604299965044,0,0.22465726229299,0.150176892841506,0.16072558669708,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,1.14681968437569,1.32171328579026,2.80254281490768,0,2.360517241366,1.96505381374582,1.64481199199607,1.67186495390678,0.32592226663359,2.36723902867367,1.94826728407911,1.11410456885174,0.294605907474837,1.99380505125259,2.43723477388514,0.768547918354051,1.30059347559878,0.164437904603676,0.829050053357545,1.15921234294021,1.03800594213442,1.33770414044857,1.04535523804977,1.13309342697566,0.383220493601921,0,3.28925599625354,0,1.30216690771284,0,0.903450714466637,0.511946444617674,0,1.18388626022008,0.821127996921047,1.41124720257313,1.60464117470104,1.73789284659359,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0,0,0.196468613246569,0,0,0.324547393654683,0,0.132957960518865,0.953962497221368,1.14398982156026,2.97166001063652,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0,0.435758888184812,0,0.134831308160164,0.196221465125346,1.15424147083917,0,0,0,0,0,0,0,0.882926198829301,0,0.171567810298526,0.329250856225877,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,2.95597942737566,0.176096868026452,1.24396869324463,0.576479813667846,0.75745460055828,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,1.97030760201927,2.80315847317372,3.46526197955321,0,1.30139853857622,0,0,0,1.49801404789436,2.99161459204025,0.414415513436035,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.82707210449155,1.2942852049117,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0.178064071293475,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,1.52234282769651,0.764637207142375,1.13929437434833,0.238231775457789,1.23408681925858,1.29694662238543,0.540031437238115,1.58625035258854,0.106824071127473,0,0.245040215981032,0.185803175125719,0.577076851905779,0.569134746787313,0.956557636372934,0,0.766021480529467,1.05836791361941,0.649243880549111,0,0.456469358066384,0.156679895773023,2.50634477090067,0.50787533340481,0.321176150207399,0.403599414382095,0.425846237690326,0.687010689511529,0,0.447352215784832,0,0.390776190804081,0.278406173895242,0,0,0.66614393599564,0,0,0.439524537815682,0.121360521749513,0.445773537109913,0.284136146806413,0.23874448473769,0,0,0,0,0,0.329607748453519,0.422250816255987,0.597743964753209,0.276283915531148,0,0.102268682502155,0.246169610922139,0,0.359473404589307,0,0,0,0,0,0,0.185536196323703,0,0,0.349839999984783,0,0,0.254253650292766,0.236387681767936,0,0,0.173624994933292,0,0.120596438625408,0,0,0.591095237907095,0,0,0.41827123283581,0.153900517007594,0,0.23056390438806,0,0,0,0,0,1.02193298195737,0,0.166211681900156,0,0.392125068635479,0.167821586975843,0.189753732724185,0.476809736941136,0,0,0,0,0,0,0.611030144933625,0.593042257361244,0.247127877893006,0.208843899010911,0.134802265961354,0,0.234264445725339,0.364909578431332,0,0,0,0,0,0.126373159256976,2.40517471063188,0.207376382794494,0,0,0,0,0,0.416024019039416,0,0.293977192243133,0.34823682632161,0,0.51595809741485,0.0967563312890851,0.146178634172371,0.164230914106418,0.0969890164884194,0.176512253383001,0,0.274083849293502,0.19871461170299,0.126621591911757,0.195551382734803,0,0,0.19980960958213,0.288180834308212,0.114536596165916,0,0,0.124252535565433,0.471388069233591,0.1359042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| |||
|short_description=p13@PRPF38B | |||
}} |
Latest revision as of 19:54, 15 September 2015
Short description: | p13@PRPF38B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PRPF38B_5end |
Coexpression cluster: | NA |
Association with transcript: | 455bp_to_ENST00000370021_5end |
EntrezGene: | PRPF38B |
HGNC: | 25512 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.86e-16 | 136 |
hematopoietic stem cell | 7.89e-15 | 168 |
hematopoietic cell | 1.08e-13 | 177 |
natural killer cell | 9.14e-13 | 3 |
pro-NK cell | 9.14e-13 | 3 |
mature alpha-beta T cell | 3.86e-12 | 18 |
alpha-beta T cell | 3.86e-12 | 18 |
immature T cell | 3.86e-12 | 18 |
mature T cell | 3.86e-12 | 18 |
immature alpha-beta T cell | 3.86e-12 | 18 |
lymphoid lineage restricted progenitor cell | 7.37e-11 | 52 |
lymphocyte | 1.35e-10 | 53 |
common lymphoid progenitor | 1.35e-10 | 53 |
T cell | 1.97e-10 | 25 |
pro-T cell | 1.97e-10 | 25 |
hematopoietic oligopotent progenitor cell | 3.25e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.25e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 1.57e-08 | 120 |
CD8-positive, alpha-beta T cell | 3.12e-08 | 11 |
nongranular leukocyte | 5.30e-08 | 115 |
granulocyte | 7.95e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 5.80e-11 | 15 |
haemolymphatic fluid | 5.80e-11 | 15 |
organism substance | 5.80e-11 | 15 |