FFCP PHASE1:Hg19::chr1:155960989..155961011,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:155960989..155961011,- | |||
|coexpression_cluster_id=C2312 | |||
|description=CAGE_peak_at_chr1:155960989..155961011,- | |||
|id=chr1:155960989..155961011,- | |||
|ontology_enrichment_celltype=CL:0002057!3.47e-131!42;CL:0000860!7.69e-122!45;CL:0000766!5.55e-88!76;CL:0002009!1.38e-84!65;CL:0002194!5.49e-83!63;CL:0000576!5.49e-83!63;CL:0000040!5.49e-83!63;CL:0000559!5.49e-83!63;CL:0000557!9.01e-77!71;CL:0000839!6.52e-74!70;CL:0000763!9.04e-60!112;CL:0000049!9.04e-60!112;CL:0000738!9.39e-56!140;CL:0002087!2.52e-47!119;CL:0000037!1.41e-43!172;CL:0000566!1.41e-43!172;CL:0002031!1.46e-42!124;CL:0000988!1.21e-40!182;CL:0002032!1.72e-39!165;CL:0000837!1.72e-39!165;CL:0002393!1.67e-25!9;CL:0002397!1.67e-25!9;CL:0000134!1.09e-15!358;CL:0002320!3.42e-15!365;CL:0000219!1.96e-13!390;CL:0000767!3.24e-12!3;CL:0000094!3.90e-12!8;CL:0000048!2.49e-11!430;CL:0000723!4.96e-11!436;CL:0000034!1.21e-10!444;CL:0000081!9.77e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.26e-76;33!CL:0002057;2.26e-76;33!CL:0000473;1.33e-52;39!CL:0000234;1.33e-52;39!CL:0000576;4.36e-51;48!CL:0000766;2.15e-35;69!CL:0002393;1.61e-22;6!CL:0002397;1.61e-22;6!CL:0000763;2.52e-16;100!CL:0002087;1.21e-15;104!CL:0000094;1.63e-11;8!CL:0000738;5.60e-10;136!CL:0000767;1.93e-08;3!CL:0000081;2.12e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.69e-98,42;CL:0002057,2.69e-98,42;CL:0000473,2.52e-85,48;CL:0000234,2.52e-85,48;CL:0000766,3.20e-72,72;CL:0002194,3.72e-67,59;CL:0000576,3.72e-67,59;CL:0000040,3.72e-67,59;CL:0000559,3.72e-67,59;CL:0002009,8.23e-65,61;CL:0000839,1.47e-59,66;CL:0000557,1.33e-58,67;CL:0000763,2.06e-46,108;CL:0000049,2.06e-46,108;CL:0000738,2.82e-38,136;CL:0002087,1.21e-34,115;CL:0002031,1.80e-30,120;CL:0000037,7.14e-30,168;CL:0002032,2.95e-29,161;CL:0000837,2.95e-29,161;CL:0000988,4.73e-28,177;CL:0002393,6.39e-15,9;CL:0002397,6.39e-15,9;CL:0000094,1.90e-11,8;CL:0000134,6.27e-11,354;CL:0002320,1.36e-10,361;CL:0000219,2.07e-09,386;CL:0000767,2.33e-08,3;CL:0000081,2.36e-08,11;CL:0000048,5.80e-08,427;CL:0000723,9.20e-08,433;CL:0000034,1.67e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.27e-72;42!CL:0000049;4.33e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.21e-67!80;UBERON:0001474!6.00e-62!86;UBERON:0002390!8.65e-57!102;UBERON:0003061!8.65e-57!102;UBERON:0004765!1.76e-51!101;UBERON:0001434!1.76e-51!101;UBERON:0002193!6.32e-51!112;UBERON:0002405!3.73e-44!115;UBERON:0002204!1.25e-27!167;UBERON:0003081!5.80e-22!216;UBERON:0002384!1.64e-14!375;UBERON:0000926!4.85e-07!448;UBERON:0004120!4.85e-07!448;UBERON:0006603!4.85e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.22e-51,76;UBERON:0001474,5.30e-47,82;UBERON:0004765,2.24e-42,90;UBERON:0002390,1.40e-41,98;UBERON:0003061,1.40e-41,98;UBERON:0002405,7.61e-41,93;UBERON:0001434,1.27e-37,100;UBERON:0002193,3.08e-37,108;UBERON:0002204,2.37e-20,167;UBERON:0003081,3.46e-17,203;UBERON:0000926,5.30e-11,315;UBERON:0004120,5.30e-11,315;UBERON:0006603,5.30e-11,315;UBERON:0002384,3.89e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32700704533794,0.767658796194425,1.39334510984468,0,0,0,0,0,0,2.21598163412751,1.80490002723128,1.73608696572681,0,0,0,0.436194716338694,0.377875943688809,0.485168122375632,3.0215774797739,0.822335776043652,5.57471467611186,1.7261543539329,1.7931249457037,2.12834006899727,6.20542225325913,10.973239620925,12.1883837934908,1.69418105588344,1.63743690034707,2.47195832889593,3.06083892370903,1.92557416245656,5.75403413219137,0.659702600373432,0.398927315243264,0,2.32167390902867,1.13477044938228,3.11411124497787,1.25624332628372,1.5644487552606,3.04064382587163,1.81619850790011,2.94622108790052,2.84816148696796,0.422510572623884,1.4882300997553,1.25795187305026,0.336985893439485,0,0.16072558669708,0.285012743741249,0,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58426764241994,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.19897633073274,16.8817401998392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:155960989..155961011,- | |||
}} |
Latest revision as of 22:26, 27 July 2015
Short description: | p@chr1:155960989..155961011, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:155960989..155961011, - |
Coexpression cluster: | C2312_testis_Eosinophils_CD14_Neutrophils_Basophils_immature_cord |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.22e-51 | 76 |
bone element | 5.30e-47 | 82 |
skeletal element | 2.24e-42 | 90 |
hematopoietic system | 1.40e-41 | 98 |
blood island | 1.40e-41 | 98 |
immune system | 7.61e-41 | 93 |
skeletal system | 1.27e-37 | 100 |
hemolymphoid system | 3.08e-37 | 108 |
musculoskeletal system | 2.37e-20 | 167 |
lateral plate mesoderm | 3.46e-17 | 203 |
mesoderm | 5.30e-11 | 315 |
mesoderm-derived structure | 5.30e-11 | 315 |
presumptive mesoderm | 5.30e-11 | 315 |
connective tissue | 3.89e-10 | 371 |