FFCP PHASE1:Hg19::chr1:156542328..156542364,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=128239 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20669 | |||
|TSSclassifier=strong | |||
|UniProt=Q86VI3 | |||
|association_with_transcript=0bp_to_ENST00000361170_5end | |||
|cluster_id=chr1:156542328..156542364,- | |||
|description=CAGE_peak_1_at_IQGAP3_5end | |||
|id=chr1:156542328..156542364,- | |||
|ontology_enrichment_celltype=CL:0000066!2.23e-32!254;CL:0000548!1.38e-19!679;CL:0000004!1.38e-19!679;CL:0000255!1.38e-19!679;CL:0000012!4.71e-19!682;CL:0002321!1.15e-16!248;CL:0000220!2.54e-16!246;CL:0000055!1.11e-13!180;CL:0000333!1.18e-10!41;CL:0000063!3.11e-09!578;CL:0000003!6.58e-09!722;CL:0000076!1.79e-08!62;CL:0000133!2.03e-08!59;CL:0000095!3.47e-08!17;CL:0000123!3.47e-08!17;CL:0000221!4.49e-08!71;CL:0000243!1.67e-07!15;CL:0000125!1.67e-07!15;CL:0000030!1.67e-07!15;CL:0000339!1.67e-07!15;CL:0000057!3.14e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000095;2.49e-08;17!CL:0000243;1.29e-07;15!CL:0000125;1.29e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.12e-32,253;CL:0002321,2.51e-15,250;CL:0000333,1.03e-10,41;CL:0000095,2.47e-08,17;CL:0000123,2.47e-08,17;CL:0000133,4.46e-08,59;CL:0000076,4.47e-08,63;CL:0000243,1.23e-07,15;CL:0000125,1.23e-07,15;CL:0000030,1.23e-07,15;CL:0000339,1.23e-07,15;CL:0000221,2.96e-07,72;CL:0000057,5.67e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000339;1.29e-07;15 | |||
|ontology_enrichment_disease=DOID:162!2.38e-37!235;DOID:14566!3.48e-37!239;DOID:0050687!7.77e-30!143;DOID:305!3.82e-23!106;DOID:0050686!9.13e-14!137 | |||
|ontology_enrichment_disease_v019=DOID:305;5.33e-08;106!DOID:0050687;2.25e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.92e-37,235;DOID:14566,1.43e-36,239;DOID:0050687,6.79e-30,143;DOID:305,3.68e-23,106;DOID:0050686,2.50e-13,137 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.87e-07!238;UBERON:0009142!1.87e-07!238;UBERON:0004119!4.51e-07!169;UBERON:0000925!4.51e-07!169;UBERON:0006595!4.51e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,1.2846031433459,0.422863212287913,0,0,0,0,0,0,12.532430761577,14.653824527421,22.9363440736681,14.5071838025649,1.8564952944007,1.32558950291166,0.672325146451775,0,0,0.975865597581014,20.6843377569004,18.1560615207385,10.657460530255,14.884271330815,22.9949034122445,22.3465898478749,3.132949635666,1.9704141467987,2.51874500203774,0,0,0,8.27479102031034,15.3615018576908,5.54631015250181,5.11283523829991,1.84820002233648,7.34001098337118,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.05783394982677,0.196709770113833,0,0,0.334372990781356,0,0,0,1.00269411196656,0,0,0,0.640456598628376,0.650296737799391,1.31550323682941,1.38175008892924,2.60822777161547,0,0,0,1.81294948316106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02420515822182,6.26526553033299,21.686349143074,3.00802746381534,3.0417768981773,6.36228757640879,3.40644409211845,16.8271974552041,9.31263469342769,8.25646985515385,0.982343066232845,15.6646973965793,19.6515754675748,0,0,0.26591592103773,0,0,0,20.2737655514039,6.881876760849,12.1499175562658,4.52246353539208,6.71199097935849,7.42818713238182,13.1666828918191,3.87625138753993,2.13459757612026,3.68192674041137,6.8480983908555,2.28081631715554,5.12530320851156,5.8826092855339,4.0507097394088,15.4488529931458,11.2264686313085,13.8512120994486,21.4643292452237,8.54339093611316,8.06087673293792,0,0,7.41359888642308,0,11.6500070731413,0.132409180813219,33.2730480068624,19.5067610209096,6.16745360156538,2.1349799145941,1.2333377420858,4.35695449559673,4.58016285036939,10.7884856054883,4.08665054641315,0,23.4321431833797,2.80944069147288,11.409436430889,3.58676833324323,17.967478292496,14.0829461600274,15.0282363171406,5.9204709663919,15.2314553466592,4.23635702820638,7.12801714369232,3.4617370098998,9.10161361938026,4.31170885089743,21.8836948140286,30.9042744083751,21.0568727767979,14.4862614890677,10.4205850571667,5.55880817954408,7.94025282120147,52.02299434977,1.70845911054854,2.33125091275518,41.7126623557319,6.38925681278321,7.72921620136887,3.7223371266318,49.7890180111735,10.4257595522483,29.7871853608055,2.48534726334208,1.61646056818812,24.850671476163,13.2992769660485,20.3472710772585,1.15956511897978,5.18217629122586,2.86804595389004,9.63592278423804,8.87949447753951,9.41170937243099,7.87824018116815,11.8590799911545,3.28479623168247,10.9514672630871,2.57296375277154,19.3388889893473,0,0,12.7771344043031,8.59781919398319,9.64044119533928,12.0220430278309,9.58669554006587,8.30447166888838,10.2471794201725,8.82996593064057,7.31019598198142,8.11971000087113,14.0241773803446,5.7620361586396,8.82052268313252,0,0,0,6.62194649121976,10.0850519605353,3.94605963686609,1.97550513735526,8.99214026060957,9.4497234066933,5.92566049014589,24.109814592964,10.3993478527958,4.3299402607582,6.60803308357938,1.40890433082986,5.77465791044295,7.40776820122577,2.85381228351897,14.223679163267,11.1603201072333,1.23108503043699,2.57404691653161,7.8774516013026,0.93733833986777,2.01578553838631,3.26082723657489,20.3297846535466,16.5661344952958,30.6706143332169,2.46331618947972,1.40877494421162,0.207328115540772,0.288239906833923,0,7.74674310364462,14.1335717456563,22.2713149699089,11.9750712215894,4.31875469353959,9.31063479316144,2.00078502841405,19.0622843387113,7.41132117016576,11.807464017173,0,3.57656445851882,5.917119267892,2.12750493267896,4.16029747645464,18.2617235726121,12.766421882095,17.3174416360465,2.43062589218851,0,18.9345277459577,6.84045987016844,0.710783897485092,7.91951872933429,0,0.871533458600294,2.89921674427965,0,0,0,4.79249710983165,0,14.2636905040718,4.48822050669496,5.34238438630997,11.2808406841134,0.224170287987055,0,0,0,3.81141936333695,1.30139853857622,0.773288812777695,4.02039036802437,1.27587750330633,0,0,0.414415513436035,0.24538298343828,1.00034104211935,1.62759014219841,0.415941723061614,5.17444067511769,2.68094105557689,3.5142424497814,0.902838299183157,0,5.17365356462525,14.6129631677796,9.77156593271027,12.598124097872,1.37060810223918,0,0,0,0,4.85004114314015,14.9791895559447,20.5625399464183,0,5.52463103837025,1.12264037773229,0.256278298511402,1.53512174720011,0,0,9.86942040336996,4.08391968220192,12.4012005580852,4.67328986265259,5.46188778761808,8.94359926978004,1.00253235151642,0.552485933615378,14.8110638132343,18.2091168006717,0.917870904715969,24.8159787099077,11.321254554349,44.7079368430807,17.5367069583913,7.17751076471555,10.2360045663807,7.31402932689017,15.9777777915583,3.08454505380579,16.2567862526312,13.0439341202262,20.8998543896931,11.6350641250021,26.6410958119392,15.3481913652154,12.5489016491952,12.3096060055867,13.7766151193876,3.57916234130733,0.309123034943167,14.1932670468432,16.0893524845147,5.16838984196555,5.85054221432869,12.8547143875328,1.64340221096607,7.39433362150293,7.36817638685422,8.40803092155637,8.27135885485707,8.26595155311102,11.7612745834219,2.75999310504886,0.826424576804891,4.42037154939744,19.652357724166,0.6069466851333,0,3.46293581513704,9.0614845120878,13.861511107924,2.12922412126809,4.34966496037536,1.11194531462352,2.14687330112987,7.44316738719335,7.90948561796815,1.33441135746677,9.72411606983069,0,14.3191461566672,2.35484592059769,3.59744915166629,4.39259247577688,6.47968212901275,3.23491970517306,1.58510321173008,2.52755073743389,31.2085593017338,1.21856744815642,5.28250733783777,8.5994944187031,2.40389234321312,10.1707304958219,20.9518830547527,1.32687795048244,0.438450885253763,5.20897980840019,0.655894752046633,4.26111791621678,8.98488144489275,9.85934608862845,10.8992627675079,1.27723753317057,4.9933947207375,29.4451683178596,0.844430541190656,0.658589785919804,29.5989075537258,28.6946470600886,6.3506594398838,11.3951386841084,16.3336477291984,0.564862804660675,3.44404298136984,3.36942951335251,6.65145230305014,2.29723400206959,0,0,0,0,0,0,0,0,13.4598329620616,2.88743956579008,19.6032172784825,5.38829207864584,12.6956907419271,0.284567373393656,1.75368900001705,1.39705560002972,9.95827924688307,5.29183956809707,3.89546328329467,3.65036331547496,4.33645890163065,2.19351854082233,12.5317238545034,6.60237933426253,5.62058262862948,5.24679238696724,14.0529258437808,5.839590860848,23.3502980874428,24.3806957602733,20.1887461471409,7.62013572067957,3.89768643453339,2.46174797895425,5.40911356951966,5.66222345596294,4.22961015263549,16.2812270155151,1.17206543417515,4.73306034823102,26.9692989951498,15.3433519275463,0.47748896947538,9.50286978664444,0.614321404198464,0,0,1.33570446027487,0,18.3679105071354,0,2.21027132424918,8.56571342704538,26.3853200855559,1.6001024709939,2.48831670129446,33.8803683825422,8.59301638442924,9.20830266408369,0.0986434056369336,0,31.1183572404983,0,0,0,12.7609602931764,14.4308999993723,0,6.60002000055898,14.2382044163949,13.9468732243082,17.5819120353147,18.371090643145,26.9118742146603,0,0,0,0,0,0,19.2821080428613,7.38945844676597,0.307801034015188,7.52017568590208,4.15015027898508,6.91133861955245,3.04212641381623,0.31900115973192,4.30508688988753,0,8.17546385565892,9.10485487091144,9.64027755020907,4.96310453357798,6.66612616680314,5.70593395717865,6.64138064534648,6.51639973819553,14.3478683879058,10.4468997221855,17.6691339292426,10.8194319871046,14.9289289661776,4.68825091867698,5.49927130440263,0.593042257361244,1.11207545051853,0.522109747527277,0.067401132980677,0.802577647298789,0,1.45963831372533,13.10952946845,13.8384816334433,0.394584402849391,2.41981432097328,0.91821828489147,6.63459086099124,30.215007302313,12.7536475418614,7.31119259977904,4.63388738225698,3.45326210247948,2.38944859545918,5.12297182853627,8.32048038078832,4.85967267338367,29.2017344294845,28.0330645188896,1.7472666824203,21.6702400914237,24.8663771412949,25.5812609801649,22.1711734043665,4.17052770900203,10.6789913296715,0.451961481561065,15.3486955604361,8.14729907982258,0,20.9239979526239,6.01191151886503,1.49417096317547,18.382484081556,8.50133461209225,11.3391230204257,9.60931988027002,0.576219191952599,4.9701014226173,9.19206735005502,34.1119557244771,31.3808538937,20.0936488743554,9.2464188768486,0,0,89.4226116468806,12.8929632425987,0.262887354279314,0,0,0,2.1964690054889,0,0.89268582976749,4.43410918412393,0.360299883542404,27.9590278865889,10.3205968822463,11.7854677485068,12.8066733322951,6.69306874300292,3.04823995436824,0,0,6.91238538399582,5.91419577368105,5.40072439437941,5.39937339723601,2.32140586367385,0,19.7906465683567,0.236417121897595,4.35373081520484,1.6896053843105,3.04788476865836,22.0702476917362,0.714695326373367,0,5.5939078284045,2.17199840701485,0.864221491201268,3.5924609612035,20.3541325656229,5.50019889020571,6.98590889320229,10.5380245113717,0,1.32506888912221,0,0,8.38325505633214,16.9155605356001,1.38823636338003,0.471612915298998,0,0.496166021811951,3.557009374163,1.70509637733254,19.1502377331055,0,0,0,0,6.91038023501031,0,0,0,0,0.110929051536852,0.310482014706917,17.2935793670289,9.74847182104432,16.2264555769563,6.28023733798928,7.05797459094515,14.0500471742064,15.3616290327475,4.0298796779456,3.97312626740282,4.43844689202091,3.03044808440143,2.26411111577318,0.889811221596536,0.228840068396924,2.41969478021182,8.08273443030458,7.68846779946096,7.80554159102142,0,8.84998854194679,4.56176828624941,3.19010057469594,3.65221543268214,2.10360652596106,1.52322084867518,13.8336049289585,5.27361111687422,1.39633724155235,0.464033759878494,1.59238355479446,21.6014992918103,3.43395705182793,3.03074539889327,10.0947918582921,4.23763626896067,12.0087291169958,9.39579451074762,9.29494294600317,9.95546639592486,19.8236730650239,9.13353089515586,8.33763907334625,11.1834865285141,12.5449293621576,14.0827247937768,7.09558250742905,8.96845315057814,8.98118888501116,7.29263894825717,0,0,0,0,4.58653788384978,5.65277690133554,21.55383658258,4.19973531295353,20.0580451824985,0.516644938982447,43.6987284246464,45.2900637619528,0.139879507719444,3.73246356019784,10.7431271895067,88.9554694022625,9.90775433692147,11.1393830955854,12.3904746866438,14.0299447267111,5.4531736273961,11.1728983594649,4.77006525980128,24.8414496753948,28.8205469382769,8.11154670488573,4.8999276376512,0,0,0,0,0.252071696221718,0,0,0,6.18330626556461,4.12894031717091,8.07085833495388,11.6680922811842,25.171218300833,29.6854768205843,13.9241355481392,0,15.9347004275781,0,6.54766736203556,15.3945602459491,19.51700338065,0,0,0,0,1.64092442705466,0,0.496211178389294,7.56246350746369,6.64364623725895,0,0.672567444437648,0,0,2.48366636455389,3.57225361422916,18.3492170098038,0,0,30.9667863115997,17.685792900839,0.313972371402056,0,21.0204122485342,7.30526976407596,15.978641750178,6.6885236304187,0.0714765441766563,21.8058784191163,13.7164881934388,7.82362225361607,4.81026818838152,1.86494547746733,1.3657478167516,0,0.430227358820278,11.2415400694037,9.28826111874819,0,19.9322975633324,1.86123831398592,5.7332336338646,4.47421727191169,41.615699052863,27.5534510459929,0,0.205325613712494,3.4794432940146,4.85710993059139,20.5866727846653,30.240517824528,8.56224653598494,23.1539468179868,16.8208990620507,18.2665040715675,5.09349443512435,4.80831033108706,0.940634592723046,0,7.3059729601504,0,0.297046400327086,2.9585900930838,8.49635573439084,0.375935671919414,2.51385763096951,4.59729317254673,12.8558835796073,10.2339512797551,1.44434460040503,2.19100916473955,0.458729283404541,0,17.0393287168639,0.0679914901909147,1.74540276136151,1.0580536810308,4.46394021800102,4.15958065768276,5.62414530760926,6.43448766658903,19.5585373815015,20.9052526668871,13.0545702069737,7.74930475270125,5.14611437395132,14.039622200373,0.682008283964155,1.07185652062471,0,0,1.70587185520785,3.09483760902862,3.35862331147232,3.66240814345562,26.2388558438635,0,1.41482032270754,2.39488422686657,1.71116650542641,3.30025059771479,0.78894425931944,1.33064142618405,28.653950551063,32.8720225303364,27.0301195201716,1.70667884002515,2.34640942403454,0.488965776731466,6.10344267473608,0,0.603821380773079,5.44966436915496 | |||
|short_description=p1@IQGAP3 | |||
}} |
Latest revision as of 16:25, 17 September 2015
Short description: | p1@IQGAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IQGAP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000361170_5end |
EntrezGene: | IQGAP3 |
HGNC: | 20669 |
UniProt: | Q86VI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.12e-32 | 253 |
embryonic cell | 2.51e-15 | 250 |
migratory neural crest cell | 1.03e-10 | 41 |
neuron associated cell | 2.47e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 2.47e-08 | 17 |
neurectodermal cell | 4.46e-08 | 59 |
squamous epithelial cell | 4.47e-08 | 63 |
glial cell (sensu Vertebrata) | 1.23e-07 | 15 |
glial cell | 1.23e-07 | 15 |
glioblast | 1.23e-07 | 15 |
glioblast (sensu Vertebrata) | 1.23e-07 | 15 |
ectodermal cell | 2.96e-07 | 72 |
fibroblast | 5.67e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.92e-37 | 235 |
disease of cellular proliferation | 1.43e-36 | 239 |
cell type cancer | 6.79e-30 | 143 |
carcinoma | 3.68e-23 | 106 |
organ system cancer | 2.50e-13 | 137 |