FFCP PHASE1:Hg19::chr1:19981535..19981580,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4681 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7650 | |||
|TSSclassifier=strong | |||
|UniProt=P41271 | |||
|association_with_transcript=8bp_to_AB463925,BT019423_5end | |||
|cluster_id=chr1:19981535..19981580,+ | |||
|coexpression_cluster_id=C315 | |||
|description=CAGE_peak_4_at_NBL1_5end | |||
|id=chr1:19981535..19981580,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.48e-14!180;CL:0000183!5.64e-11!59;CL:0000192!2.20e-10!42;CL:0000514!2.20e-10!42;CL:0000359!1.06e-09!32;CL:0000187!1.88e-09!54;CL:0000680!2.57e-09!57;CL:0000056!2.57e-09!57;CL:0000355!2.57e-09!57;CL:0000393!3.62e-08!60;CL:0000211!3.62e-08!60;CL:0000222!3.67e-08!119;CL:0000220!2.37e-07!246;CL:0002321!5.83e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.71e-09;32!CL:0000192;1.32e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.26e-09,32;CL:0000192,1.31e-09,43;CL:0000514,1.31e-09,43;CL:0000136,1.66e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.32e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.78e-12!83;UBERON:0002329!4.78e-12!83;UBERON:0003077!4.78e-12!83;UBERON:0003059!4.78e-12!83;UBERON:0007282!4.78e-12!83;UBERON:0009618!4.78e-12!83;UBERON:0007285!4.78e-12!83;UBERON:0000481!1.56e-11!347;UBERON:0000475!4.83e-11!365;UBERON:0004290!6.91e-11!70;UBERON:0000486!5.13e-10!82;UBERON:0000477!6.64e-10!286;UBERON:0002385!1.45e-09!63;UBERON:0001015!1.45e-09!63;UBERON:0000383!1.45e-09!63;UBERON:0001134!7.10e-09!61;UBERON:0002036!7.10e-09!61;UBERON:0003082!7.10e-09!61;UBERON:0005256!9.39e-09!143;UBERON:0003103!2.69e-08!69;UBERON:0002100!9.24e-08!216;UBERON:0000119!9.44e-08!312;UBERON:0001637!1.03e-07!42;UBERON:0003509!1.03e-07!42;UBERON:0004572!1.03e-07!42;UBERON:0000483!1.52e-07!309;UBERON:0002049!1.52e-07!79;UBERON:0007798!1.52e-07!79;UBERON:0004111!1.53e-07!241;UBERON:0003102!2.55e-07!95;UBERON:0000468!5.37e-07!659;UBERON:0004872!8.51e-07!84 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.17e-08,73;UBERON:0007503,1.36e-08,78;UBERON:0003077,2.65e-08,72;UBERON:0007285,2.65e-08,72;UBERON:0002329,6.09e-08,71;UBERON:0003059,6.09e-08,71;UBERON:0007282,6.09e-08,71;UBERON:0004290,6.09e-08,71;UBERON:0009618,6.09e-08,71;UBERON:0004573,2.67e-07,33;UBERON:0004571,2.67e-07,33;UBERON:0000486,3.41e-07,83 | |||
|phase1_expression=3.08853244759946,4.92431204949261,1.9733616573436,2.00146596706261,8.04529969969118,14.8297549097063,10.1319951267324,5.05375898741465,2.87304191019822,0.982935746006035,1.39560233594486,0.436882744260345,0.263766978228454,0.866364470720326,3.64537113300707,4.70627602516243,0.602694528023977,5.11217063271161,2.43966399395253,0.246242116153576,2.44800829493104,2.19418305034661,0.572471974262113,0.273748850145768,0.376627918784408,0,0,0,0,0,0,4.59710612239464,3.614471025339,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,5.36560687762909,0.383587685530591,1.0843174571537,1.50401373190767,2.17269778441236,0,3.40644409211845,0.283604451492204,0.665188192387692,0.263504357079378,1.37528029272598,0,0.741568885568859,0,0,0,0,0,0,0.39752481473341,0,0,1.13061588384802,0.419499436209906,1.6507082516404,0.626984899610432,0.258416759169329,0.71153252537342,0,2.01414658554573,0.760272105718513,0.976248230192678,0.367663080345869,0,0.267899184852239,0,0,0,0,1.46561395144326,0,0,0,0.993943903390637,0.506522046658319,0.132409180813219,3.15520282823695,3.19201543978521,2.24271040056923,1.06748995729705,0.49333509683432,0.311211035399766,0.67355336034844,1.30769522490767,3.02714855289863,6.91411109375999,0.234321431833797,2.18512053781224,0,2.24173020827702,1.64408298101271,1.29498355494505,0.702254033511242,0,0.61417158655884,1.34323515528495,4.75201142912821,4.94533858557114,0,5.03032699271367,0.168336113954066,1.12606667884768,0,0.877955241761676,2.45190236639216,3.15499923703853,0.453728732640084,0.89694817844431,0,0.211931901159562,2.10063767259082,0.92747276314595,0.257640540045629,0.558350568994769,0.337552664482532,0.389748020644795,0.252433774244115,0.644349290496095,7.59736467048416,0.710019185033229,0.403008392910561,0.339121184620975,1.15956511897978,0.545492241181669,0.573609190778008,0,0,0.116193942869518,0.207322110030741,0,0,1.56449532329816,14.1513006402435,8.28809528114883,0,4.33127689001751,0.354920400119532,0.505754070234305,0.723033089650446,0.441175890929576,0.653638332277218,0.474541238222193,0.674156540800822,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,1.09750285408626,0,0.703702806881416,0.185176890317059,0.651616610620649,2.07986957055916,0,0.115930404975077,0.234817388471643,0.433099343283221,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0.839910640994298,0.283550194484773,0.179117045405697,0.581267877027924,1.91691339582606,0.492663237895943,0.088048434013226,1.03664057770386,0,0.37872730027914,0.761974731506028,0.763976851116555,2.34434894420094,1.71072446022705,1.95372236136315,3.00343057843917,3.71574362419752,0.112131084345361,5.66748089483264,0.2933531432838,0.517086863031111,3.57656445851882,0.845302752556,1.59562869950922,0,0.257207374262142,2.83698264046557,0.532844358032199,0,0,0,0,0,0,2.41151501647669,7.84380112740265,4.39881161201051,0,0,0,1.19812427745791,0,0,0.723906533337896,0.410952645100767,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,2.20844685094452,6.00204625271613,1.35632511849868,0.831883446123229,2.14114786556594,1.10391690523754,1.87426263988341,2.10662269809403,65.9481761762356,4.1389228517002,1.32845119707087,1.65932251687533,2.17209036170207,7.44044398358414,15.0983106476777,0,0,0,1.21251028578504,1.66435439510497,0.907170879989041,1.98486246255021,0.153461973288062,3.92924132206303,1.53766979106841,0,0.160853921143607,0,2.31314540703983,3.37367278094941,0.574890092096664,2.07701771673448,3.25389059687886,0.241718899183244,3.40860999515584,2.3941057123333,1.37777337797528,1.63882051206045,4.19598127870157,0.451199612907412,0.693138033939733,1.56869953835371,4.38417673959782,0.422206515571503,1.13733384070897,0.850468526382578,0.647747748306418,3.08454505380579,0.541892875087706,2.00675909541941,0.764628819135115,1.66215201785745,1.56712328305525,0,0,0.256450125116389,0,0,0.9273691048295,0.0915694648183434,0.082509499920588,0,1.95018073810956,0,0.48335359146061,0.924291702687866,0.921022048356777,0.551346289938122,0.429680979473094,0.435050081742686,0.426133137080504,0.0890320356467374,2.64455864577565,0.576570202095319,0,1.92199783625545,2.78907329578371,1.5740617341532,2.0911118104818,0.616067160352178,1.59691809095107,0,0.74129687641568,2.28999818787186,2.97726695487734,2.21465597303108,1.14378116354295,0.255897791311334,2.56763392820352,2.54562598340749,5.49464048139461,0.539617372749944,2.47083326762449,0.589062011728432,0.808729926293264,4.75530963519025,2.94880919367287,0,3.1682753652067,9.50851320810799,0.682499557039929,2.2624869112594,14.6910551606316,1.10273068709225,5.97095077717098,6.13831239355268,0.578775534266688,1.9676842561399,0.405820753925408,0.92947049429925,1.12678241012897,0.286822704408103,0.196498082026242,0.35667105148125,2.83808851256478,6.54433669422759,14.4889752902357,0.75894634753143,3.14941248220485,0.577332676353072,2.68120910214315,4.3556393944529,1.31801321087491,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0.399158742865633,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,1.31857361344705,0,0.111443384277478,0,0,0.593929361665277,0.307160702099232,0.994147647766298,0.422008249231538,3.33926115068718,0.659215496907038,0,0.19924798825107,1.38141957765574,0,0.102268682502155,0,1.24415835064723,0,0,0,2.66337195219721,0,0,4.84666373047609,1.94813006139888,1.99613798001194,0,0.174919999992391,1.44999915086959,1.137934482855,0.508507300585533,0.472775363535873,0,0,0,0,0.361789315876224,0,0.331737779793674,1.18219047581419,1.53569778007781,0,0.139423744278603,3.69361240818226,0.113942055847001,0,0,0,0.31900115973192,1.92354946143911,0,0,0.156980256395025,0.332423363800313,0,0,0.167821586975843,0,0.158936578980379,2.3209787098083,0.816164040795739,0,0,1.99052386215701,6.36894464424042,1.22206028986725,0.593042257361244,0.370691816839509,0.104421949505455,0.202203398942031,0,0.468528891450678,0,0,0.242780379534093,0,1.20990716048664,1.53036380815245,0.947798694427319,0.150323419414493,0.207376382794494,0,0.330991955875499,0,0,0,0.138674673013139,1.04135843001079,0,0,2.44617335538842,0,0.677294319023596,0.65780385377567,0.410577285266046,2.23074737923365,0,1.58186518546373,0.137041924646751,0.397429223405979,0.50648636764703,0,0.160317640503067,4.4825128895264,2.19790570540343,0.144090417154106,0.114536596165916,0,0.432164393964449,0,0.471388069233591,0,0.104602846312333,0,0,0,0.136905378891993,0,0.859530882839914,0,0.279282401272254,0.229160424011684,3.58936512288407,0.399358000997982,0.429226048136571,0.223171457441873,0.0671834724867263,0.720599767084807,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0.482259445395058,0.412618309791701,1.24632101408756,0,0,0.607495566580247,0.335434687599266,0.236417121897595,0.0524545881349981,0,0.35857467866569,0,1.42939065274673,0,0,9.23099322981312,5.18532894720761,3.26587360109409,0,0.164185041498678,0.170388021785422,0.226624183040251,0.146552233678082,0,0,0.13223260174269,0,0,2.34932307648928,0.78602152549833,2.48543433208317,0,0,0,0,0.544017803369474,1.0027595760908,0.612691153526923,0.327872630709804,0,0,0.732157589411779,0.876336514945499,0,0.332787154610557,0.124192805882767,0.415045904808692,0,0.909894705249887,1.7127920012698,2.35265819698172,0,0,3.88062487505873,0.701139929541673,3.32883516901568,0.947015026375446,2.0125432140206,16.9064132103342,1.37304041038154,3.78077309408098,1.70980920641059,0.73927574994817,0.477890301491107,1.34940933649081,0.310525913752519,3.31764966272684,0.53168342911599,2.60872530905867,3.00515217994437,8.3777146677135,1.62748293281865,1.81848659202559,1.39633724155235,2.32016879939247,3.18476710958893,0.800055529326307,1.37358282073117,1.6837474438296,0,0.385239660814607,0.214441591374926,0.782982875895635,0.226705925512272,0.231522474323834,0.244736704506468,0,2.16161013012681,0.877136198314828,0.883445729729405,0,0.675769762612291,0.256241518587947,0.345430341731199,0.911579868532147,0.691292180758654,0.194860308839388,0.132864840313363,0,1.96565909307848,0.983091635014877,0.422624246717254,0,0.106691729694141,0,0,0.552317850755522,0,0,0,0,0,0.109209638192014,0,0,0.247871528518004,0,0,0,0,1.76337971845342,3.062454773532,0.385375350578757,4.25089728976755,0.159633859057151,1.23069818544453,1.76450187355203,0.276629009856872,1.93770774758221,1.42769420259154,0,0.235939446695481,0.550285795565037,1.15525666150338,0.381382095467167,0,0,3.68530608911361,0.40341013740704,0,0,1.47394725759087,0.295712172434091,0.540300676947157,0.781078098613847,1.03343398250592,0.443910671357348,0,0,0.496211178389294,2.28632617667507,0.255524855279191,0.535701835878287,0,0.606965604236632,0.227662191351298,0.177404740325278,0,0,0.203909198930495,0.460409414939944,0,0,2.66876515691748,0.471346769748006,0,0.913158720509496,0.863710364874486,0.9555033757741,0.571812353413251,0.158013611732727,0.116241425368125,0.173858272302579,0,0.828864656652147,1.19502933965765,0,0.860454717640555,0.354996002191696,0.170426809518315,0,0.68732060563215,0.93061915699296,0.955538938977433,0,0.785201868921944,0.365753774946808,0,0.821302454849976,3.4794432940146,0,0,1.19370465096821,0.118920090777569,0,0,0,4.63044948647668,1.09279780251979,4.70317296361523,1.47088993052343,0,0.785233868459781,0.594092800654172,2.113278637917,0,0,0.193373663920732,0,0,0.352894871715692,0.0802413666891683,0,0.458729283404541,0.286679166302903,0,0.611923411718232,0.436350690340377,2.645134202577,4.83593523616777,10.1678638298912,6.05677186973305,0,0.109265571963696,0.126698501011437,0,0,0.0918948995348449,0.50141507858475,4.47094319487613,0.535928260312357,0,0.413731983447581,1.91910583710883,0.952257725854961,0.0645889098360061,0,0.224263725161227,0.509177266225319,0.202117188958219,2.8303177226605,0.684466602170562,0.26940821205835,1.07583308089015,0.99798106963804,0.244209805832924,0,0,0.449126010532934,0,0.977931553462932,6.10344267473608,2.66302709674205,2.61655931668334,0 | |||
|short_description=p4@NBL1 | |||
}} |
Latest revision as of 15:36, 19 September 2015
Short description: | p4@NBL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NBL1_5end |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | 8bp_to_AB463925, BT019423_5end |
EntrezGene: | NBL1 |
HGNC: | 7650 |
UniProt: | P41271 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.26e-09 | 32 |
smooth muscle cell | 1.31e-09 | 43 |
smooth muscle myoblast | 1.31e-09 | 43 |
fat cell | 1.66e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.17e-08 | 73 |
epithelial vesicle | 1.36e-08 | 78 |
paraxial mesoderm | 2.65e-08 | 72 |
presumptive paraxial mesoderm | 2.65e-08 | 72 |
somite | 6.09e-08 | 71 |
presomitic mesoderm | 6.09e-08 | 71 |
presumptive segmental plate | 6.09e-08 | 71 |
dermomyotome | 6.09e-08 | 71 |
trunk paraxial mesoderm | 6.09e-08 | 71 |
systemic artery | 2.67e-07 | 33 |
systemic arterial system | 2.67e-07 | 33 |
multilaminar epithelium | 3.41e-07 | 83 |