FFCP PHASE1:Hg19::chr1:20302056..20302073,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:20302056..20302073,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr1:20302056..20302073,- | |||
|id=chr1:20302056..20302073,- | |||
|ontology_enrichment_celltype=CL:0002322!3.66e-11!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.10e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.08e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0010227;4.06e-12;1!UBERON:0010226;6.61e-12;1!UBERON:0000358;8.64e-12;1!UBERON:0010115;1.39e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.48e-15!115;UBERON:0004151!2.69e-12!3;UBERON:0002081!8.57e-09!2;UBERON:0002133!2.58e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.95e-32;3!UBERON:0002081;2.42e-22;2!UBERON:0002107;6.04e-14;19!UBERON:0006925;6.04e-14;19!UBERON:0007029;4.06e-12;1!UBERON:0002079;4.06e-12;1!UBERON:0002134;5.33e-12;1!UBERON:0005208;5.33e-12;1!UBERON:0004145;5.33e-12;1!UBERON:0005946;5.33e-12;1!UBERON:0005965;5.33e-12;1!UBERON:0002078;5.33e-12;1!UBERON:0002084;6.61e-12;1!UBERON:0002082;6.61e-12;1!UBERON:0002363;1.39e-11;1!UBERON:0000029;1.39e-11;1!UBERON:0002423;1.42e-10;25!UBERON:0002365;1.67e-08;31!UBERON:0002330;1.67e-08;31!UBERON:0002368;2.05e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.41e-32,3;UBERON:0002081,2.85e-22,2;UBERON:0010227,2.85e-22,2;UBERON:0002107,5.96e-14,19;UBERON:0006925,5.96e-14,19;UBERON:0008836,5.96e-14,19;UBERON:0007029,4.06e-12,1;UBERON:0002079,4.53e-12,1;UBERON:0008835,4.89e-12,22;UBERON:0003894,4.89e-12,22;UBERON:0002134,5.62e-12,1;UBERON:0005208,5.62e-12,1;UBERON:0005946,5.62e-12,1;UBERON:0005965,5.62e-12,1;UBERON:0002078,5.62e-12,1;UBERON:0002084,6.97e-12,1;UBERON:0002082,6.97e-12,1;UBERON:0010226,6.97e-12,1;UBERON:0000029,1.19e-11,1;UBERON:0002363,1.32e-11,1;UBERON:0007645,1.32e-11,1;UBERON:0007647,1.32e-11,1;UBERON:0010115,1.32e-11,1;UBERON:0009854,1.65e-11,23;UBERON:0007499,1.40e-10,25;UBERON:0009497,1.40e-10,25;UBERON:0000015,1.40e-10,25;UBERON:0002423,1.40e-10,25;UBERON:0006235,1.40e-10,25;UBERON:0004161,1.40e-10,25;UBERON:0009856,3.62e-10,26;UBERON:0002365,1.66e-08,31;UBERON:0002330,1.66e-08,31;UBERON:0002368,1.62e-07,35 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0,0.580969714347592,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,4.91413608338813,20.6776467338491,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,1.57117284469109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.92730807327823,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.530745387020035,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,3.62972148145992,0,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.387956065953678,0,6.10148000107438,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,4.30723814746088,0,0.858452096273142,0.669514372325618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00286728461357,3.31045985182716,0,0,0,0,0,0,0,0,2.19828350517124,2.65013777824443,0,0,0,0,0,0,0,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.34282092365053,0,0,0,0,0,0,0.540219106755613,0,0,1.47088993052343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0.924351257262837,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0.684466602170562,0.0673520530145875,0.358611026963382,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr1:20302056..20302073,- | |||
}} |
Latest revision as of 02:21, 28 July 2015
Short description: | p@chr1:20302056..20302073, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:20302056..20302073, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.08e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 2.41e-32 | 3 |
cardiac atrium | 2.85e-22 | 2 |
future cardiac atrium | 2.85e-22 | 2 |
liver | 5.96e-14 | 19 |
digestive gland | 5.96e-14 | 19 |
liver bud | 5.96e-14 | 19 |
surface | 4.06e-12 | 1 |
left cardiac atrium | 4.53e-12 | 1 |
hepatic diverticulum | 4.89e-12 | 22 |
liver primordium | 4.89e-12 | 22 |
tricuspid valve | 5.62e-12 | 1 |
right atrium valve | 5.62e-12 | 1 |
outflow tract of atrium | 5.62e-12 | 1 |
outflow part of right atrium | 5.62e-12 | 1 |
right cardiac atrium | 5.62e-12 | 1 |
heart left ventricle | 6.97e-12 | 1 |
cardiac ventricle | 6.97e-12 | 1 |
future cardiac ventricle | 6.97e-12 | 1 |
lymph node | 1.19e-11 | 1 |
dura mater | 1.32e-11 | 1 |
future meninx | 1.32e-11 | 1 |
ectomeninx | 1.32e-11 | 1 |
future dura mater | 1.32e-11 | 1 |
digestive tract diverticulum | 1.65e-11 | 23 |
epithelial sac | 1.40e-10 | 25 |
epithelium of foregut-midgut junction | 1.40e-10 | 25 |
anatomical boundary | 1.40e-10 | 25 |
hepatobiliary system | 1.40e-10 | 25 |
foregut-midgut junction | 1.40e-10 | 25 |
septum transversum | 1.40e-10 | 25 |
sac | 3.62e-10 | 26 |
exocrine gland | 1.66e-08 | 31 |
exocrine system | 1.66e-08 | 31 |
endocrine gland | 1.62e-07 | 35 |