FFCP PHASE1:Hg19::chr1:222791417..222791455,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375056 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24008 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JRA6 | |||
|association_with_transcript=0bp_to_ENST00000320831,ENST00000344441,ENST00000344507,ENST00000344922,ENST00000470521,NM_198551,uc001hnl.2_5end | |||
|cluster_id=chr1:222791417..222791455,+ | |||
|description=CAGE_peak_1_at_MIA3_5end | |||
|id=chr1:222791417..222791455,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-14!115;UBERON:0000955!3.55e-10!69;UBERON:0006238!3.55e-10!69;UBERON:0001017!7.17e-10!82;UBERON:0000073!1.81e-09!94;UBERON:0001016!1.81e-09!94;UBERON:0001049!3.63e-09!57;UBERON:0005068!3.63e-09!57;UBERON:0006241!3.63e-09!57;UBERON:0007135!3.63e-09!57;UBERON:0005743!1.28e-08!86;UBERON:0002616!1.95e-08!59;UBERON:0003080!3.31e-08!42;UBERON:0002780!8.08e-08!41;UBERON:0001890!8.08e-08!41;UBERON:0006240!8.08e-08!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.51e-14,114;UBERON:0001016,2.24e-10,89;UBERON:0000955,8.29e-10,68;UBERON:0006238,8.29e-10,68;UBERON:0001017,1.59e-09,81;UBERON:0001049,8.56e-09,56;UBERON:0005068,8.56e-09,56;UBERON:0006241,8.56e-09,56;UBERON:0007135,8.56e-09,56;UBERON:0000073,3.55e-08,53;UBERON:0002616,3.55e-08,53;UBERON:0011216,7.50e-08,223;UBERON:0002780,8.08e-08,41;UBERON:0001890,8.08e-08,41;UBERON:0003080,8.08e-08,41;UBERON:0006240,8.08e-08,41 | |||
|phase1_expression=45.056238059098,42.1778032065237,70.7591108561775,35.0256544235956,56.7640589922655,36.6382180122155,20.2639902534648,29.6908340510611,28.7304191019822,4.91467873003018,4.88460817580699,12.66959958355,7.91300934685361,39.1101675353747,40.4304798388057,26.893005858071,27.121253761079,18.9880623500717,19.5173119516203,9.97280570421982,10.6080359447012,9.40364164434263,25.475002854664,21.2155358862971,28.623721827615,15.2062677438423,13.546597259241,17.1589503263821,21.2416709498408,61.412703695554,24.46094748394,14.7107395916628,8.433765725791,16.2691764473387,5.03536803771961,16.7759694335157,21.4328320714438,42.6576464569546,42.7159673111402,37.1088588924107,35.378644929908,40.4867082523724,40.9545152538357,16.8661956984295,9.44689859222024,20.3770611397766,15.3403164357752,14.3908760807639,15.4853185447552,11.507695692886,14.6011602721587,15.6078271726466,17.9267753983042,21.9464792418501,10.8341189275473,11.4827827120989,12.0078706025452,13.4834090667051,13.1616073719488,17.3301674621091,17.2621023965741,22.10003711251,15.5581652944873,19.1801137739712,15.0908804086864,18.1563271901165,21.7987787148451,16.3311632416883,20.3378338183879,17.8094852658196,25.4267791106015,22.4649357952414,19.304205633894,29.153229511048,23.8116815960849,22.0141577783795,30.8903735652862,34.0901546750219,65.7367649591058,22.5160067555586,25.2624180042844,31.418234447517,19.3595868907455,31.6760394532036,22.2377313465889,31.5780364699215,32.832470936953,33.9103939573145,26.4417949113945,20.989182599778,35.2912040847858,43.4555520134495,36.3159566718967,51.5468181458201,51.5667877943013,24.7581039688572,50.3577011491413,64.0607543281138,52.6339837438744,33.771672068917,38.4588274627637,30.7741073727577,44.8101475338196,25.5129946267047,23.568472597987,26.3625334554509,34.933698425687,20.3665198363824,20.1591988717811,21.3769275984779,26.5296017074414,38.543810402762,42.8548167538355,43.0740733224438,43.9049199980903,25.2679834215573,30.6576394881537,28.5210779750583,46.302603639569,28.9894527034928,24.0900877926875,19.0090408889675,37.6437797694432,42.1075950698037,41.2271397622741,31.4913745218542,36.129631864526,71.1671803583305,90.127345979042,56.6263419181744,80.4562658836074,40.9127524419218,27.3625882345155,37.5896718479949,34.0909779232405,28.2450711973606,47.717156823066,39.4174244945135,51.8050798059092,34.58978600416,39.3499839905205,17.4857065789446,6.19301990097322,4.82019775619758,18.8237488319716,26.6418498067879,18.4811565121223,75.8400185290987,117.258956709926,108.837047889563,12.3232692567357,15.4842227119102,7.63709103536707,20.9163938511884,13.8434813949269,20.9089711874451,18.3915570552393,18.6060066601917,29.8843660656837,44.8525621104658,8.45941565929209,11.4040815857777,10.7387305321195,22.427447901098,18.6332648012805,34.1124962045185,26.9435247151404,31.9816604572635,15.3316637465883,15.1882505530901,16.3049552098062,57.9833836718678,69.8004475466986,4.36094052142534,54.1699427347897,32.9239330327907,74.5463687978422,147.147186444141,34.757501455439,18.5023608046961,14.9448594021587,24.9134223901332,85.5830347349357,32.4652719687948,31.711609204011,21.4927547255803,44.9417221094399,12.8876787508588,28.7187270683895,15.4027391817001,20.7733665967003,28.3017141731473,27.8421464313186,33.0059395750284,42.2599134497629,23.0928516546124,55.1759671478587,43.956105719436,44.2607803408617,14.5625817910084,9.3420358436111,30.9738449675482,37.2853189218453,59.2917207136151,50.9214040221772,22.3736090933284,54.2359392652814,13.8387263455226,90.7711556585642,51.0402159276376,44.7176311446675,107.132521302132,47.198058391205,72.912272832913,33.5010341396862,156.961988984378,42.8722822709274,95.9248342127635,55.5060888813065,61.4255015911485,119.638232678099,33.4496966115766,22.0428770003634,13.3349988682675,28.092850420856,25.5256089896213,28.9077683527141,42.5420556311968,26.0274432027721,28.5067901292269,27.7552935963191,31.7530302395972,32.8544017892614,30.2323240950656,16.5761905622977,29.7195473940467,16.6032280784005,15.6164976052594,15.8469608673416,17.5938051814942,14.7793923461408,15.9051994187456,17.5580258142211,15.9100943628994,17.2674889310305,20.0068521612123,10.3341763647451,8.41450642820675,9.4662022606222,5.88034845542168,163.513994920162,95.3342400177297,120.521140963006,17.658523976586,38.4953812639945,30.024366802242,20.3038028005957,17.9842805212191,18.8994468133866,21.4805192767789,14.9871820442749,11.4392826380754,24.5363281442965,26.5480627392926,54.2428167369496,10.6831171343195,12.5006088395685,16.9326195488792,5.53143078571493,3.43394464837949,22.1595305478658,22.4644094533668,17.6871083123587,9.3733833986777,37.2920324601468,23.3928910449938,23.016540334632,19.7631078189494,6.9008882249738,111.834555002379,19.8108976529759,37.5263889128797,43.0918660716715,34.7166691922545,28.5740524314761,11.0776643411901,14.0660936652056,5.13217338068116,21.5937734676979,28.5325904951722,33.1558661851471,15.9226139770412,17.4384027533312,26.475121181363,57.3966417964533,14.3062578340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| |||
|short_description=p1@MIA3 | |||
}} |
Latest revision as of 20:13, 15 September 2015
Short description: | p1@MIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000320831, ENST00000344441, ENST00000344507, ENST00000344922, ENST00000470521, NM_198551, uc001hnl.2_5end |
EntrezGene: | MIA3 |
HGNC: | 24008 |
UniProt: | Q5JRA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data