FFCP PHASE1:Hg19::chr1:226298353..226298372,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:226298353..226298372,- | |||
|coexpression_cluster_id=C622 | |||
|description=CAGE_peak_at_chr1:226298353..226298372,- | |||
|id=chr1:226298353..226298372,- | |||
|ontology_enrichment_celltype=CL:0000738!1.20e-36!140;CL:0000988!4.05e-30!182;CL:0000037!4.92e-29!172;CL:0000566!4.92e-29!172;CL:0002031!1.29e-28!124;CL:0002087!3.28e-28!119;CL:0002032!3.03e-25!165;CL:0000837!3.03e-25!165;CL:0002057!1.89e-19!42;CL:0000860!3.22e-18!45;CL:0000557!1.11e-16!71;CL:0000766!1.88e-15!76;CL:0000542!5.50e-14!53;CL:0000051!5.50e-14!53;CL:0002009!1.01e-13!65;CL:0000839!1.12e-13!70;CL:0000838!1.81e-13!52;CL:0000236!2.53e-12!14;CL:0002194!2.56e-12!63;CL:0000576!2.56e-12!63;CL:0000040!2.56e-12!63;CL:0000559!2.56e-12!63;CL:0000763!5.74e-12!112;CL:0000049!5.74e-12!112;CL:0000945!8.58e-12!24;CL:0000826!8.58e-12!24;CL:0000134!1.38e-11!358;CL:0002320!4.66e-11!365;CL:0000219!3.92e-10!390;CL:0000034!4.86e-09!444;CL:0000048!6.81e-09!430;CL:0000723!2.83e-08!436;CL:0002393!2.67e-07!9;CL:0002397!2.67e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.46e-31;13!CL:0000945;7.22e-19;24!CL:0002393;9.42e-15;6!CL:0002397;9.42e-15;6!CL:0000542;7.98e-13;53!CL:0000784;1.49e-11;3!CL:0000623;2.69e-11;3!CL:0002087;8.67e-11;104!CL:0000767;3.33e-10;3!CL:0000766;5.89e-10;69!CL:0000738;2.36e-09;136!CL:0001014;2.12e-08;2!CL:0001016;2.12e-08;2!CL:0000576;4.14e-08;48!CL:0000451;4.43e-08;10!CL:0000081;2.64e-07;11!CL:0000097;3.48e-07;5!CL:0000860;5.12e-07;33!CL:0002057;5.12e-07;33!CL:0000988;7.42e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.50e-45,136;CL:0000037,3.67e-38,168;CL:0000988,1.76e-37,177;CL:0002031,3.78e-34,120;CL:0002032,6.25e-31,161;CL:0000837,6.25e-31,161;CL:0002087,1.70e-29,115;CL:0000236,1.99e-29,14;CL:0000945,4.92e-19,24;CL:0000826,4.92e-19,24;CL:0000557,9.69e-19,67;CL:0000766,1.52e-18,72;CL:0000838,2.15e-17,52;CL:0000542,5.59e-17,53;CL:0000051,5.59e-17,53;CL:0000763,2.10e-14,108;CL:0000049,2.10e-14,108;CL:0000860,2.58e-14,42;CL:0002057,2.58e-14,42;CL:0000134,6.57e-14,354;CL:0000839,1.46e-13,66;CL:0002320,2.04e-13,361;CL:0002009,3.10e-13,61;CL:0000473,4.32e-12,48;CL:0000234,4.32e-12,48;CL:0000219,1.09e-11,386;CL:0000784,1.55e-11,3;CL:0000623,2.19e-11,3;CL:0000825,2.19e-11,3;CL:0002194,1.79e-10,59;CL:0000576,1.79e-10,59;CL:0000040,1.79e-10,59;CL:0000559,1.79e-10,59;CL:0000034,2.38e-10,441;CL:0000767,3.87e-10,3;CL:0002393,7.37e-10,9;CL:0002397,7.37e-10,9;CL:0000048,1.41e-09,427;CL:0000723,2.75e-09,433;CL:0001014,2.20e-08,2;CL:0001016,2.20e-08,2;CL:0000451,4.57e-08,10;CL:0000081,2.98e-07,11;CL:0000097,3.49e-07,5;CL:0002028,3.49e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;7.98e-13;53!CL:0002057;4.55e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.67e-18!102;UBERON:0003061!5.67e-18!102;UBERON:0002193!1.89e-17!112;UBERON:0001474!7.63e-15!86;UBERON:0002371!8.22e-15!80;UBERON:0002405!5.00e-11!115;UBERON:0004765!8.57e-11!101;UBERON:0001434!8.57e-11!101;UBERON:0002384!3.59e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.57e-18,98;UBERON:0003061,3.57e-18,98;UBERON:0002371,1.58e-17,76;UBERON:0002193,6.99e-16,108;UBERON:0001474,7.66e-16,82;UBERON:0004765,6.03e-14,90;UBERON:0002405,2.55e-13,93;UBERON:0002384,9.54e-13,371;UBERON:0001434,5.23e-12,100 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,1.22261449196722,0.738905305049512,0.865818594450472,1.18009283054671,1.53531759238885,1.08371286321253,0.919421224478927,0.30120591877825,0,0,0,1.17440175733939,16.0658668474244,8.82395568868623,11.2845652772243,0,0,0,0.290796477559129,0,0.242584061187816,0,1.23350366406548,0.309706370895104,0.863077176966451,0.512321413058201,0.709446689665756,1.37898272294647,1.29096936716765,0,0,0.545812300115692,0.449446968890169,0.918251677112708,1.28371610830437,0.639337125799041,0,0.398927315243264,0.426224750532694,1.45104619314292,2.8369261234557,0,0,1.0429658368404,0.217188844705117,1.21079900526674,1.10483290796269,1.58231193720442,1.47878700418359,1.70083439972035,0.628975936525128,0.898629049171961,0.750884464207532,0.16072558669708,0.285012743741249,0.79566670879636,0,1.75996244461323,4.91524750135918,4.44754626931777,6.40095333849761,4.40435585739614,4.02326707968138,1.98313461835459,7.63243003628291,13.6611112586268,12.3319809767897,9.17455747500549,2.64342657158052,2.80254281490768,0.790152254325231,0.196709770113833,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,0,0.294605907474837,0.221533894583621,0,0.512365278902701,0.260118695119756,0,1.38175008892924,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,1.00803371612366,2.40696176205157,0.579297615531196,0,0,0,0,0,0,0,0,0.378139268656271,0.443458794925128,0,0.0654895377488563,0.364295288292542,0.741568885568859,0,0,0.132957960518865,4.5313218618015,4.0039643754609,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0.141775097242386,0,0,0,0,0.352193736052904,6.01251535068239,3.89123874225796,7.32206113873004,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,2.95546140302891,2.58753089831421,5.64709359630893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0.82707210449155,2.5885704098234,2.56146138728266,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0.193341436584244,0.154048617114644,0,0.413509717453592,0,0.290033387828457,0,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0.55597265731176,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.709522128141196,0,0,0,0.349934720244983,0.192444225451024,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0.556812347790485,0,0,0,0,0.18714054040822,0,0,0.445773537109913,0,0,0,0,0,0,0,0.494411622680279,0,0,0,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0.627921025580099,0,0,0.19606253431774,0,0,0,0.210998064528027,0,0,0,0,0,0,2.37216902944498,0.988511511572023,0.417687798021821,0.067401132980677,0,0,0.364909578431332,0.19566461893209,0,0,0,0,0,1.05226393590145,0,0,0,0,0,1.13843818411917,0,0,0.0979923974143777,0,0,0.171986032471617,0,0,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0,0.640358984218058,0.19980960958213,0,0,0.171594997861965,0.288109595976299,0,0,0,0,0,0,0,0,2.55493176133945,0,1.05154941711726,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0,0.160753148465019,0,0,3.14963448172101,10.8332273638113,0.0607495566580247,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0.592834895693833,0.365377795142688,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0.453692771289717,0.466311601748341,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.429642228169954,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0.584580926518165,0.265729680626726,0.654261577023377,0,0,0,0.79994958341972,0,0,0,0,0,0,0.255788742607303,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0.705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|short_description=p@chr1:226298353..226298372,- | |||
}} |
Latest revision as of 04:32, 28 July 2015
Short description: | p@chr1:226298353..226298372, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:226298353..226298372, - |
Coexpression cluster: | C622_CD19_CD14_immature_Peripheral_Neutrophils_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.57e-18 | 98 |
blood island | 3.57e-18 | 98 |
bone marrow | 1.58e-17 | 76 |
hemolymphoid system | 6.99e-16 | 108 |
bone element | 7.66e-16 | 82 |
skeletal element | 6.03e-14 | 90 |
immune system | 2.55e-13 | 93 |
connective tissue | 9.54e-13 | 371 |
skeletal system | 5.23e-12 | 100 |