FFCP PHASE1:Hg19::chr1:32135689..32135701,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1307 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2193 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=305bp_to_uc001bti.1_5end | |||
|cluster_id=chr1:32135689..32135701,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_27_at_COL16A1_5end | |||
|id=chr1:32135689..32135701,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002575;9.86e-18;2!CL:0000632;2.74e-12;3!CL:0000669;1.50e-09;4!CL:0000540;8.72e-07;6!CL:0000404;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.27e-17,2;CL:0000632,2.59e-12,3;CL:0000669,1.70e-09,4;CL:0000540,8.02e-07,6;CL:0000031,8.02e-07,6;CL:0000404,8.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;6.78e-08;5!CL:0000031;8.72e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.08e-32!82;UBERON:0000955!1.36e-30!69;UBERON:0006238!1.36e-30!69;UBERON:0005743!3.69e-30!86;UBERON:0002619!4.36e-30!22;UBERON:0001049!6.04e-30!57;UBERON:0005068!6.04e-30!57;UBERON:0006241!6.04e-30!57;UBERON:0007135!6.04e-30!57;UBERON:0001950!1.09e-28!20;UBERON:0000073!1.09e-26!94;UBERON:0001016!1.09e-26!94;UBERON:0001869!1.42e-26!32;UBERON:0000956!3.14e-26!25;UBERON:0000203!3.14e-26!25;UBERON:0002780!4.21e-26!41;UBERON:0001890!4.21e-26!41;UBERON:0006240!4.21e-26!41;UBERON:0002616!4.29e-26!59;UBERON:0003080!2.18e-25!42;UBERON:0001893!7.85e-25!34;UBERON:0002020!8.40e-25!34;UBERON:0003528!8.40e-25!34;UBERON:0002791!2.37e-22!33;UBERON:0003075!7.70e-22!86;UBERON:0007284!7.70e-22!86;UBERON:0007023!2.15e-21!115;UBERON:0002346!1.32e-20!90;UBERON:0000033!1.77e-17!123;UBERON:0004121!1.35e-16!169;UBERON:0000153!2.29e-16!129;UBERON:0007811!2.29e-16!129;UBERON:0003056!3.09e-16!61;UBERON:0000924!4.84e-16!173;UBERON:0006601!4.84e-16!173;UBERON:0002021!8.80e-13!5;UBERON:0000200!9.24e-11!6;UBERON:0000025!1.34e-10!194;UBERON:0000483!5.14e-10!309;UBERON:0000119!7.77e-10!312;UBERON:0001905!1.30e-09!2;UBERON:0002757!1.30e-09!2;UBERON:0010134!1.30e-09!2;UBERON:0002784!1.30e-09!2;UBERON:0005408!1.30e-09!2;UBERON:0001899!1.30e-09!2;UBERON:0000475!4.03e-09!365;UBERON:0004111!1.04e-08!241;UBERON:0000477!2.49e-08!286;UBERON:0001871!5.90e-08!7;UBERON:0000481!6.22e-08!347;UBERON:0001872!1.51e-07!5;UBERON:0000349!1.85e-07!5;UBERON:0002530!6.80e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.41e-67;2!UBERON:0002757;7.41e-67;2!UBERON:0010134;7.41e-67;2!UBERON:0005408;7.41e-67;2!UBERON:0001899;7.41e-67;2!UBERON:0003296;4.28e-34;4!UBERON:0010133;4.28e-34;4!UBERON:0002784;4.28e-34;4!UBERON:0001894;5.35e-20;7!UBERON:0002368;6.59e-14;33!UBERON:0000949;2.20e-10;43!UBERON:0002046;6.78e-08;5!UBERON:0002530;3.65e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.41e-67,2;UBERON:0002757,7.41e-67,2;UBERON:0010134,7.41e-67,2;UBERON:0005408,7.41e-67,2;UBERON:0001899,7.41e-67,2;UBERON:0003296,4.28e-34,4;UBERON:0010133,4.28e-34,4;UBERON:0002784,4.28e-34,4;UBERON:0001894,5.35e-20,7;UBERON:0006222,5.35e-20,7;UBERON:0002368,1.09e-15,35;UBERON:0000949,2.44e-12,45;UBERON:0002530,1.52e-09,59;UBERON:0002046,7.01e-08,5;UBERON:0004117,7.01e-08,5;UBERON:0007689,7.01e-08,5;UBERON:0007123,7.01e-08,5;UBERON:0003091,7.01e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.696418755514666,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,0.82046545696302,0.252071696221718,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.126831620387814,0,0,0,0,0,4.82131652290458,7.39824188881413,0,0,0,0,0,0.135939465953663,0.591954962065642,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0820016907288,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p27@COL16A1 | |||
}} |
Latest revision as of 13:40, 17 September 2015
Short description: | p27@COL16A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_COL16A1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 305bp_to_uc001bti.1_5end |
EntrezGene: | COL16A1 |
HGNC: | 2193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.27e-17 | 2 |
hepatic stellate cell | 2.59e-12 | 3 |
pericyte cell | 1.70e-09 | 4 |
neuron | 8.02e-07 | 6 |
neuroblast | 8.02e-07 | 6 |
electrically signaling cell | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 7.41e-67 | 2 |
regional part of epithalamus | 7.41e-67 | 2 |
secretory circumventricular organ | 7.41e-67 | 2 |
circumventricular organ | 7.41e-67 | 2 |
epithalamus | 7.41e-67 | 2 |
gland of diencephalon | 4.28e-34 | 4 |
neuroendocrine gland | 4.28e-34 | 4 |
regional part of diencephalon | 4.28e-34 | 4 |
diencephalon | 5.35e-20 | 7 |
future diencephalon | 5.35e-20 | 7 |
endocrine gland | 1.09e-15 | 35 |
endocrine system | 2.44e-12 | 45 |
gland | 1.52e-09 | 59 |
thyroid gland | 7.01e-08 | 5 |
pharyngeal pouch | 7.01e-08 | 5 |
thyroid diverticulum | 7.01e-08 | 5 |
pharyngeal pouch 2 | 7.01e-08 | 5 |
thyroid primordium | 7.01e-08 | 5 |