FFCP PHASE1:Hg19::chr1:34630742..34630755,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114784 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19290 | |||
|TSSclassifier=strong | |||
|UniProt=E7EUA6,Q53TY4 | |||
|association_with_transcript=119bp_to_ENST00000373381,uc001bxm.1_5end | |||
|cluster_id=chr1:34630742..34630755,- | |||
|coexpression_cluster_id=C1856 | |||
|description=CAGE_peak_3_at_CSMD2_5end | |||
|id=chr1:34630742..34630755,- | |||
|ontology_enrichment_celltype=CL:0000055!3.57e-12!180;CL:0002620!5.63e-08!23 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.50e-32!57;UBERON:0005068!2.50e-32!57;UBERON:0006241!2.50e-32!57;UBERON:0007135!2.50e-32!57;UBERON:0005743!1.30e-31!86;UBERON:0001017!9.35e-31!82;UBERON:0000073!5.28e-29!94;UBERON:0001016!5.28e-29!94;UBERON:0002346!1.26e-26!90;UBERON:0003075!1.73e-26!86;UBERON:0007284!1.73e-26!86;UBERON:0002780!3.81e-26!41;UBERON:0001890!3.81e-26!41;UBERON:0006240!3.81e-26!41;UBERON:0002616!8.61e-26!59;UBERON:0000955!1.18e-25!69;UBERON:0006238!1.18e-25!69;UBERON:0003080!3.99e-25!42;UBERON:0002020!4.23e-25!34;UBERON:0003528!4.23e-25!34;UBERON:0001893!1.16e-24!34;UBERON:0002791!6.64e-24!33;UBERON:0001869!1.22e-23!32;UBERON:0000956!1.66e-19!25;UBERON:0000203!1.66e-19!25;UBERON:0003056!1.87e-19!61;UBERON:0002619!9.58e-18!22;UBERON:0000475!2.03e-16!365;UBERON:0001950!2.51e-16!20;UBERON:0000033!5.52e-16!123;UBERON:0000924!8.51e-16!173;UBERON:0006601!8.51e-16!173;UBERON:0004121!2.13e-15!169;UBERON:0000153!1.15e-14!129;UBERON:0007811!1.15e-14!129;UBERON:0000025!8.23e-14!194;UBERON:0007023!2.35e-13!115;UBERON:0004111!5.96e-10!241;UBERON:0000119!8.81e-09!312;UBERON:0000483!1.53e-08!309;UBERON:0003076!2.56e-08!15;UBERON:0003057!2.56e-08!15;UBERON:0002308!4.87e-07!9;UBERON:0000125!4.87e-07!9;UBERON:0000477!5.59e-07!286;UBERON:0000468!9.85e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.82e-27;22!UBERON:0001950;4.76e-27;20!UBERON:0000956;1.12e-26;25!UBERON:0000203;1.12e-26;25!UBERON:0003528;1.59e-24;34!UBERON:0002020;1.59e-24;34!UBERON:0001869;1.62e-24;32!UBERON:0002791;2.26e-22;32!UBERON:0001893;5.55e-22;34!UBERON:0002780;8.07e-17;41!UBERON:0001890;8.07e-17;41!UBERON:0000073;1.01e-14;53!UBERON:0002616;1.01e-14;53!UBERON:0000955;1.21e-13;68!UBERON:0002021;2.29e-13;5!UBERON:0001017;2.40e-12;75!UBERON:0001016;2.52e-11;83!UBERON:0000200;4.72e-10;6!UBERON:0001872;1.28e-08;5!UBERON:0004733;1.76e-08;12!UBERON:0002028;1.76e-08;12!UBERON:0004732;9.49e-08;13!UBERON:0001870;1.65e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.58e-33,56;UBERON:0005068,3.58e-33,56;UBERON:0006241,3.58e-33,56;UBERON:0007135,3.58e-33,56;UBERON:0000073,1.73e-30,53;UBERON:0002616,1.73e-30,53;UBERON:0001017,1.82e-30,81;UBERON:0003528,2.17e-29,34;UBERON:0002020,2.17e-29,34;UBERON:0001869,1.89e-28,32;UBERON:0001016,4.15e-28,89;UBERON:0002619,4.21e-28,22;UBERON:0001950,1.26e-27,20;UBERON:0000956,2.64e-27,25;UBERON:0000203,2.64e-27,25;UBERON:0000955,2.71e-27,68;UBERON:0006238,2.71e-27,68;UBERON:0001893,1.81e-26,34;UBERON:0002791,9.61e-26,32;UBERON:0002346,2.74e-23,86;UBERON:0002780,3.40e-23,41;UBERON:0001890,3.40e-23,41;UBERON:0003080,3.40e-23,41;UBERON:0006240,3.40e-23,41;UBERON:0003075,4.66e-23,82;UBERON:0007284,4.66e-23,82;UBERON:0010371,2.63e-16,104;UBERON:0003056,3.62e-15,61;UBERON:0010314,5.88e-14,132;UBERON:0004121,2.19e-13,171;UBERON:0000924,2.19e-13,171;UBERON:0006601,2.19e-13,171;UBERON:0002021,2.22e-13,5;UBERON:0000025,6.63e-12,192;UBERON:0003076,4.45e-11,15;UBERON:0003057,4.45e-11,15;UBERON:0000200,2.55e-10,6;UBERON:0001872,1.68e-08,5;UBERON:0004733,1.71e-08,12;UBERON:0002028,1.71e-08,12;UBERON:0007277,1.71e-08,12;UBERON:0007023,2.80e-08,114;UBERON:0001870,3.78e-08,3;UBERON:0004111,4.89e-08,240;UBERON:0004732,9.25e-08,13;UBERON:0011216,9.23e-07,223 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.563817616383885,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0.861847406537515,1.02000345622126,0,0.572471974262113,0.684372125364421,1.50651167513763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0.144846518960824,4.7717156823066,0.973269740605272,0.0945348171640679,0.443458794925128,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,3.83986624358335,1.43418310374407,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.939475989150119,0.485618833104395,0.702254033511242,0,0,0,1.18800285728205,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.600952235626387,0,5.202299434977,0.427114777637135,0,1.50045548042201,1.03052529238439,1.54584324027377,0.930584281657949,2.02531598689519,0.68205903612839,2.52433774244115,0.368199594569197,0,4.26011511019937,0.906768884048762,1.52604533079439,0.193260853163297,0,0,1.70763188581434,1.19276791489337,0.464775771478074,0.829288440122964,0.252320850875628,2.55484151353081,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0.201057944823262,0,0,0,0,0.463721619900307,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.22001485746285,0.904902010304444,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.799783929456456,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.508189248444927,1.30139853857622,0,0.502548796003046,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0,0.468565659970853,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0.60818530127658,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,1.07423381301644,0.280660094433074,0.512556597022804,1.02341449813341,0.64341568457443,1.48418066444991,0.308419387605311,0.355123450626254,0.492762936082855,0,0.348631135379878,0,0,0,0.459257792658427,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,5.35180989612088,0,0,1.06461206063404,1.73986598415015,0.37064843820784,0.143124886741991,0,0,0,0,0,0.636406495851874,0.78494864019923,0,0.274537029736055,0,1.2130948894399,1.58510321173008,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.141405431953713,1.13008116620243,2.2054613741845,0,1.75380354101505,0,0,0.405820753925408,0.92947049429925,0.281695602532241,0.430234056612155,0.294747123039363,1.07001315444375,1.06428319221179,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,1.6480387422676,0,0.19924798825107,0.828851746593443,0,0.20453736500431,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.11321717794222,7.98455192004777,0,0,0,0,0,0,0.344743373241465,0,0.868124974666461,1.77148277162768,0.964771509003264,0,1.76926815889959,1.47773809476774,0.658156191461918,0,1.95193241990045,0.153900517007594,0.455768223388005,0,0,0,0,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0.802577647298789,0.234264445725339,0,0.19566461893209,0,0.394584402849391,0,3.67287313956588,0.126373159256976,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0.397429223405979,1.70939149080872,0.195551382734803,0,0.640358984218058,0,0.144090417154106,0,0,0,0,0,0.543616824294456,0.523014231561666,0,0,2.40168115483916,0.273810757783986,0,0,0,0.558564802544508,0.458320848023367,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,1.59045937961861,0.953423842781029,1.28602518772015,2.20063098555574,0.83088067605837,0,0.77380195455795,1.70098758642469,1.0063040627978,0,0.104909176269996,0,0,0,0,0,0,1.62899880526114,1.72844298240254,0.653174720218818,0,0,0.170388021785422,0.113312091520126,0,0,1.80996138906171,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,1.77213635993397,0.732157589411779,1.752673029891,1.14681839138014,1.22021956690538,0.993542447062135,0,0,0,0,0.235265819698172,0,0.144921028610825,0.149254802886874,0.701139929541673,0,0,0.251567901752575,0,0.457680136793847,0.453692771289717,0.777186002913902,0.147855149989634,0.63718706865481,0.449803112163605,0.310525913752519,0.414706207840855,1.32920857278997,1.04349012362347,0.601030435988874,0.380805212168795,0,0.181848659202559,0.537052785212442,0,0.398095888698616,0,1.03018711554838,0.673498977531838,0,0,0.214441591374926,0,0,0,0,0,0,0,0.17668914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| |||
|short_description=p3@CSMD2 | |||
}} |
Latest revision as of 17:35, 17 September 2015
Short description: | p3@CSMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CSMD2_5end |
Coexpression cluster: | C1856_brain_parietal_temporal_occipital_duodenum_Fibroblast_neuroectodermal |
Association with transcript: | 119bp_to_ENST00000373381, uc001bxm.1_5end |
EntrezGene: | CSMD2 |
HGNC: | 19290 |
UniProt: | E7EUA6Q53TY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data