FFCP PHASE1:Hg19::chr1:39670360..39670383,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23499 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13664 | |||
|TSSclassifier=strong | |||
|UniProt=E9PS75 | |||
|association_with_transcript=0bp_to_ENST00000494012_5end | |||
|cluster_id=chr1:39670360..39670383,+ | |||
|description=CAGE_peak_6_at_MACF1_5end | |||
|id=chr1:39670360..39670383,+ | |||
|ontology_enrichment_celltype=CL:0000048!3.09e-09!430;CL:0000791!2.68e-08!18;CL:0000789!2.68e-08!18;CL:0002420!2.68e-08!18;CL:0002419!2.68e-08!18;CL:0000790!2.68e-08!18;CL:0000723!3.42e-08!436;CL:0000034!4.78e-08!444;CL:0000625!7.56e-08!11;CL:0002320!1.83e-07!365;CL:0000134!2.05e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.40e-08;11!CL:0000791;3.56e-08;18!CL:0000789;3.56e-08;18!CL:0002419;3.56e-08;18!CL:0000860;2.52e-07;33!CL:0002057;2.52e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.60e-08,11;CL:0000791,3.66e-08,18;CL:0000789,3.66e-08,18;CL:0002420,3.66e-08,18;CL:0002419,3.66e-08,18;CL:0000790,3.66e-08,18;CL:0000048,1.15e-07,427;CL:0000034,7.86e-07,441;CL:0000723,8.30e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000790;3.56e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.06e-07!375;UBERON:0003081!2.74e-07!216;UBERON:0001009!3.01e-07!113 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,6.67e-09,203;UBERON:0000926,4.60e-08,315;UBERON:0004120,4.60e-08,315;UBERON:0006603,4.60e-08,315;UBERON:0001009,2.50e-07,112;UBERON:0002390,7.52e-07,98;UBERON:0003061,7.52e-07,98 | |||
|phase1_expression=2.90685406832891,1.2846031433459,8.17535543756633,1.0007329835313,0,2.61701557230111,0,0,0,0.245733936501509,0,1.96597234917155,0,1.23766352960047,2.31978163009541,3.36162573225888,6.02694528023977,5.11217063271161,2.43966399395253,1.72369481307503,1.42800483870977,1.25381888591235,0,1.23186982565596,0.87879847716362,0.152826811495903,0.410502947249729,0.236132343941038,7.08055698328027,18.4238111086662,6.03782880932696,0,0,0,0.0774672005803016,0,8.51441274071057,1.66198622559563,4.21143339687298,4.77423915574874,0.895661896959697,4.53451132426571,0.515151135268373,2.4717700592526,5.29026321164333,1.94067248950253,6.27558399645349,11.5127008646111,15.1756121738601,15.5353891853961,19.9805351092698,34.5264055637334,3.44745680736619,8.39130088658974,4.06279459783025,5.08254316765033,3.82068610080984,12.5845151289247,3.36692281607993,6.09765151444578,8.95071976118658,7.91643120448119,11.9678194572979,14.4916415181116,0.870627715885752,0,0.622822248995575,15.8286659111748,11.4726242052444,41.9174470280875,1.81619850790011,2.57794345191295,3.16462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0.300353785683013,0,0,0.19891667719909,0.730656615058536,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,1.76171156811282,0.382273228125229,29.0776922873857,17.3757654524276,6.05783394982677,4.52432471261816,8.25322601773246,10.2800749499755,4.01247588937627,0.651844533267181,1.4203434172042,1.94826728407911,16.9343894465464,2.65145316727353,3.76607620792156,3.79125409271022,6.40456598628376,4.68213651215562,9.20852265780586,9.39590060471884,10.1431080007268,1.63115219478266,1.07016331235885,0,13.5971211237079,6.51474839123266,4.81078423675682,10.3738073727996,10.1940932583711,15.626002892554,11.4054245333805,11.1425588117552,16.7662460612288,8.74515085866421,11.3653080981128,9.03240796613151,23.1847754708442,17.1161725301445,10.8618302912099,0,3.35350429851818,1.53435074212236,2.53007406669196,2.00535164254356,1.59331170856906,3.9764297352555,6.8128881842369,4.15953195521899,4.87804674417641,4.65524364173568,6.67993285038334,0,0,0.97364218096405,0,0.132957960518865,0.238490624305342,0.571994910780128,0.371457501329565,2.18638648103376,0,1.73570250803797,4.52246353539208,2.93649605346934,2.47606237746061,0.626984899610432,3.10100111003195,3.5576626268671,2.34304428935269,0.402829317109147,0,0,0.735326160691737,0,0.803697554556718,0.44905874525234,1.35133776579987,1.53316637465883,3.79706263827252,1.28241220751285,1.31780417436063,11.6334079244498,0,6.46063537203914,2.02608818663328,12.0492354540029,5.73673241497627,1.77334191099179,3.36406560085384,2.1349799145941,2.22000793575444,1.8672662123986,1.61652806483626,1.9615428373615,2.57307626996383,2.30470369792,0.937285727335186,0.312160076830321,1.71141546463335,0.149448680551801,0.822041490506354,0.485618833104395,0.98315564691574,2.24569588380383,0.982674538494144,1.54988671763648,2.37600571456411,2.47266929278557,0.910161361938026,1.43723628363248,1.34668891163253,1.00094815897571,0.831192346452549,0.877955241761676,2.45190236639216,1.95309476578576,1.70148274740032,8.61070251306537,2.77624605464138,2.33125091275518,6.30191301777245,3.09157587715317,9.27505944164265,2.41951913231067,5.40084263172052,1.94874010322397,6.05841058185875,3.03764665519588,5.01102776138317,9.23024940543197,1.5112814734146,2.88253006927829,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0.518305275076852,0,0,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,0,0,0,1.18157981336281,6.62194649121976,0,2.91665277507493,0.329250856225877,0,0,0.462942225792648,0.325808305310325,2.07986957055916,0,1.507095264676,11.1538259524031,0.433099343283221,0,0.190254152234598,0.790204397959275,0,0.984868024349589,0.234004265139238,0.148631162288728,0,0.503946384596579,0.425325291727159,0.358234090811393,0.290633938513962,0,68.9728533054321,10.5658120815871,19.2815147452918,11.241356366523,4.67097003677606,0,0,0,0,0.205654985406647,0,0,1.23344192779897,0.43596006883328,1.6134422880609,9.30756353456,0,0,14.6265964121679,1.04007436911366,0.514414748524284,1.41849132023278,0,6.14805372730035,1.08524321078289,1.64648067356154,0,4.97548728239564,0.791951872933429,10.5503781970855,3.48613383440118,8.49770425047485,0,1.00451418286425,0,4.55287225434007,1.14861935834114,1.42636905040718,1.44781306667579,0.821905290201534,1.25342674267927,0.896681151948218,24.431814265039,24.581543533985,17.9680250791648,0.254094624222463,1.30139853857622,0.773288812777695,0.335032530668698,0,0,2.99161459204025,1.65766205374414,3.18997878469764,1.00034104211935,1.62759014219841,5.40724239980099,3.39015078714607,2.20783381047509,5.73992933464295,1.80567659836631,4.5481500811197,0,1.32845119707087,0.921845842708516,0.695068915744663,1.17480694477644,0,7.65041696654683,8.62856803274467,7.57765660404455,0,0,0.604780586659361,3.96972492510043,9.51464234385987,1.68396056659844,5.50998341799514,2.55853624533352,3.05622450172854,1.48418066444991,0.925258162815933,0.177561725313127,0.9033987161519,0.519254429183621,0.348631135379878,0,0,0,3.21480454860899,2.1850940160806,1.44236856455367,0.451199612907412,0.693138033939733,0,0,1.26661954671451,0,0.850468526382578,1.0795795805107,1.54227252690289,0.812839312631559,0,0,0,0.223874754722178,0.219259876645935,0,0.256450125116389,2.62411716559765,0.325378394664303,3.29731237272711,0.54941678891006,1.23764249880882,0,0,4.82051789532479,1.64340221096607,0.770243085573222,1.22802939780904,1.65403886981437,3.54486808065303,1.30515024522806,1.70453254832202,2.40386496246191,0.165284915360978,0,0.127612712494584,0,0,4.09256050879832,3.485186350803,1.84820148105653,2.12922412126809,0,4.44778125849408,1.43124886741991,5.21021717103534,7.2767267685307,4.38449446024797,0,0.855877976067841,1.59101623962968,0.78494864019923,7.3747707609159,6.03981465419321,4.59468369148177,1.2130948894399,0,1.68503382495592,1.46290121726877,1.46228093778771,2.11300293513511,3.00299805097569,3.25232493493539,1.13008116620243,4.41092274836899,1.99031692572366,2.63070531152258,0,0.655894752046633,1.62328301570163,0.6196469961995,1.40847801266121,5.87986544036611,3.63521451748548,1.07001315444375,3.54761064070598,0.211107635297664,1.64647446479951,0,1.39973888097993,0.288666338176536,0,0,2.7301702225266,0,0,0,0.229723400206959,5.07447609232169,6.88173486428138,5.69647187174163,5.95579438644473,4.52498500394814,3.8908398671563,7.02040868409549,1.58625035258854,0,0,0,0.185803175125719,1.00988449083511,0.924843963529383,1.27541018183058,4.19116680008915,4.21311814291207,6.77355464716425,0,4.21195767170188,2.9670508274315,0,10.0253790836027,1.18504244461122,2.24823305145179,0.80719882876419,0.425846237690326,0.343505344755765,0,0,0,1.17232857241224,5.2897173040096,1.23087398947712,2.97501246323581,5.99529542396076,2.81974010175699,0,5.42080263306008,0.36408156524854,0.780103689942349,15.0592157807399,0.47748896947538,0.296964680832639,0,1.9882952955326,0.562677665642051,2.89402633059555,0.16480387422676,0,9.36465544780028,9.39365312805902,0,3.88620993508188,0.369254416383208,4.66559381492711,0.269605053441981,0,0.511572370226872,9.07519331859789,4.7896618469388,5.55684950723184,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0.60298219312704,0,0.552896299656123,0,1.31631238292384,0,0,27.0095407348328,1.25336261431701,0,0,0,0.957003479195758,6.50342913153222,0.533034776018635,3.06579894587209,4.86638794824577,2.32696354660219,1.57916962432026,1.56850027454192,3.02078856556517,2.27704479269022,10.6487507916854,0,0,0,0,5.97157158647103,6.81123246675712,11.6095727537389,0.296521128680622,0,0.208843899010911,0.876214728748802,5.61804353109152,0.234264445725339,0,0,0.485560759068186,7.10251925128903,9.67925728389311,0,3.03295582216742,2.40517471063188,0.311064574191741,0,0,0,0,0,2.77349346026277,0,0,0,8.21215340737542,6.53546923392143,0,0,0,5.52837393983991,0.353024506766001,1.80784592624426,2.60379656828827,2.18586072873289,0.949661939338181,0,1.12222348352147,4.69596588426576,1.79828648623917,0,0.114536596165916,0,0,3.10631338913581,0,1.08723364858891,1.46443984837266,1.22397861163586,0.577901179803038,0.600420288709789,0.136905378891993,5.10986352267889,4.72741985561953,0,10.3334488470734,7.79145441639724,8.61447629492177,7.18844401796368,14.1644595885068,9.81954412744239,19.5503904936373,11.1692963898145,0,0,0,0,0,0,0,0.681017030557878,0,0.137539436597234,0,1.5748172408605,2.32140586367385,0.485996453264197,0,0.86686278029118,2.15063811353492,16.2624518239886,0,0.191915197319445,4.2881719582402,2.64836788146173,0,1.62899880526114,4.32110745600634,0.326587360109409,14.3676229874985,5.17182880720835,2.72620834856675,2.71949019648302,0.732761168390412,0,0.517131825446202,0.26446520348538,0,0,4.27149650270779,11.6331185773753,2.48543433208317,0.992332043623902,1.18566979138767,0,0,1.08803560673895,0.5013797880454,1.22538230705385,0.655745261419609,0,1.77213635993397,0.366078794705889,0.3755727921195,1.14681839138014,0.887432412294818,0.931446044120752,0,0,0.454947352624943,0.285465333544967,0.941063278792687,0,0,1.19403842309499,0.701139929541673,0.554805861502613,1.32582103692562,2.51567901752575,1.77962244319307,1.14420034198462,2.41969478021182,2.33155800874171,3.40066844976158,4.46030948058367,0,2.48420731002015,2.07353103920428,2.39257543102195,7.82617592717601,5.10875870590543,11.0433511528951,3.25496586563729,2.90957854724095,2.25562169789226,5.56840511854192,9.9523972174654,4.40030541129469,1.37358282073117,1.6837474438296,15.1421877874381,11.5571898244382,14.7964698048699,0.260994291965212,1.13352962756136,4.63044948647668,1.95789363605174,23.1024604995119,3.08801447160972,8.33279388399087,0.706756583783524,7.71656153083659,4.89933077893911,3.07489822305536,1.38172136692479,2.43087964941906,0.553033744606923,0.389720617678777,0.398594520940089,0,0.982829546539238,0,0,2.59983614611409,0.106691729694141,1.54993481694734,0.567515953566836,0,0.279759015438889,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,9.22212616894914,5.99349262009525,0,1.41070377476274,2.1437183414724,0.834979926253974,1.41696576325585,0.638535436228605,0.205116364240755,0,0.345786262321089,0.161475645631851,0,0,0,0.733714394086716,0,4.19520305013884,1.3807198521202,0.397832444232549,18.0504788038217,2.82387096184928,0,0,0.327543835020193,0,0.540300676947157,0,0.620060389503552,0.951237152908602,0,0,14.8863353516788,0,0,0,1.68141861109412,0.606965604236632,1.36597314810779,1.86274977341542,2.07421177600403,7.71696042468383,1.08751572762931,0.328863867814245,0.472775363535873,0.222462803784138,6.90739217084523,0.471346769748006,0,6.39211104356647,1.72742072974897,4.7775168788705,2.85906176706625,0,0.23248285073625,0,6.41369091784202,0,0.17071847709395,0.691259661814092,0.860454717640555,0.709992004383392,1.27820107138737,1.27016115057279,0,0,0,0,0,0,1.29485767437579,1.12929087541872,0,2.91426595835484,0,0,0,0,0,0,3.55001127296545,2.40415516554353,0,12.5025644094492,0,0.588925401344836,2.67341760294377,1.2679671827502,2.0391253762538,3.853340637174,12.2469987149797,0.399764623699716,0,0,0,8.76403665895821,0.458729283404541,0.573358332605805,0,0.543931921527318,0,10.0515099697926,0.743990036333503,1.38652688589425,0.432626562123789,0.252332849670158,0.655593431782173,1.0135880080915,0.917899467677836,0.26721740526556,1.01084389488329,0,5.53184496993148,1.33982065078089,0,0.724030971033267,4.05144565611864,3.80903090341985,4.06910131966838,4.46937942930177,1.45771421354797,0.700118741059814,4.44657815708082,3.26575121845442,3.08009970976753,4.17582728690443,1.29099969706817,7.98384855710432,0,1.28072815053259,3.8614456457388,0,11.7320471201727,38.7505378059687,7.32413120968329,5.99181096766961,4.02547587182052,0.641136984606466 | |||
|short_description=p6@MACF1 | |||
}} |
Latest revision as of 23:30, 17 September 2015
Short description: | p6@MACF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MACF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000494012_5end |
EntrezGene: | MACF1 |
HGNC: | 13664 |
UniProt: | E9PS75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.60e-08 | 11 |
mature alpha-beta T cell | 3.66e-08 | 18 |
alpha-beta T cell | 3.66e-08 | 18 |
immature T cell | 3.66e-08 | 18 |
mature T cell | 3.66e-08 | 18 |
immature alpha-beta T cell | 3.66e-08 | 18 |
multi fate stem cell | 1.15e-07 | 427 |
stem cell | 7.86e-07 | 441 |
somatic stem cell | 8.30e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 6.67e-09 | 203 |
mesoderm | 4.60e-08 | 315 |
mesoderm-derived structure | 4.60e-08 | 315 |
presumptive mesoderm | 4.60e-08 | 315 |
circulatory system | 2.50e-07 | 112 |
hematopoietic system | 7.52e-07 | 98 |
blood island | 7.52e-07 | 98 |