FFCP PHASE1:Hg19::chr1:39670594..39670662,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23499 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13664 | |||
|TSSclassifier=strong | |||
|UniProt=B4E2T3 | |||
|association_with_transcript=171bp_to_ENST00000536367,uc010oit.1_5end | |||
|cluster_id=chr1:39670594..39670662,+ | |||
|description=CAGE_peak_8_at_MACF1_5end | |||
|id=chr1:39670594..39670662,+ | |||
|ontology_enrichment_celltype=CL:0000222!8.97e-09!119;CL:0000192!1.32e-08!42;CL:0000514!1.32e-08!42;CL:0000359!1.93e-08!32;CL:0000055!2.19e-08!180;CL:0000680!7.77e-08!57;CL:0000056!7.77e-08!57;CL:0000355!7.77e-08!57;CL:0000187!1.05e-07!54;CL:0000057!1.50e-07!75;CL:0000183!5.20e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.79e-09;32!CL:0000192;2.19e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.61e-10,43;CL:0000514,3.61e-10,43;CL:0000359,4.69e-10,32;CL:0000222,7.03e-08,121;CL:0000680,3.63e-07,58;CL:0000056,3.63e-07,58;CL:0000355,3.63e-07,58;CL:0000187,4.10e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;2.19e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;6.18e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.82e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001009!4.59e-22!113;UBERON:0004535!2.45e-20!110;UBERON:0004872!1.74e-17!84;UBERON:0002049!7.03e-14!79;UBERON:0007798!7.03e-14!79;UBERON:0001981!5.70e-12!60;UBERON:0007500!5.70e-12!60;UBERON:0004537!5.70e-12!60;UBERON:0006965!5.70e-12!60;UBERON:0000055!1.52e-11!69;UBERON:0007100!5.89e-11!27;UBERON:0001637!1.11e-10!42;UBERON:0003509!1.11e-10!42;UBERON:0004572!1.11e-10!42;UBERON:0000948!4.64e-09!24;UBERON:0005498!4.64e-09!24;UBERON:0004140!4.64e-09!24;UBERON:0009881!4.64e-09!24;UBERON:0004141!4.64e-09!24;UBERON:0003084!4.64e-09!24;UBERON:0007005!4.64e-09!24;UBERON:0004139!4.64e-09!24;UBERON:0004291!4.64e-09!24;UBERON:0002385!6.40e-09!63;UBERON:0001015!6.40e-09!63;UBERON:0000383!6.40e-09!63;UBERON:0003914!7.50e-09!118;UBERON:0001134!2.68e-08!61;UBERON:0002036!2.68e-08!61;UBERON:0003082!2.68e-08!61;UBERON:0004573!5.84e-08!33;UBERON:0004571!5.84e-08!33;UBERON:0000947!3.39e-07!21;UBERON:0010191!3.39e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.22e-13;25!UBERON:0000948;2.32e-10;22!UBERON:0001637;4.30e-10;42!UBERON:0003509;4.30e-10;42!UBERON:0004572;4.30e-10;42!UBERON:0000947;1.44e-09;21!UBERON:0010191;1.44e-09;21!UBERON:0004573;4.24e-09;33!UBERON:0004571;4.24e-09;33!UBERON:0001009;8.69e-08;112!UBERON:0004535;1.63e-07;109!UBERON:0007500;4.85e-07;56!UBERON:0001981;4.85e-07;56!UBERON:0004537;4.85e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,3.56e-26,112;UBERON:0004535,5.35e-24,109;UBERON:0004872,3.89e-20,83;UBERON:0002049,4.15e-15,78;UBERON:0007798,4.15e-15,78;UBERON:0007500,6.39e-14,59;UBERON:0001981,6.39e-14,59;UBERON:0004537,6.39e-14,59;UBERON:0006965,6.39e-14,59;UBERON:0007100,1.37e-13,27;UBERON:0003914,2.75e-13,117;UBERON:0001637,3.32e-13,42;UBERON:0003509,3.32e-13,42;UBERON:0004572,3.32e-13,42;UBERON:0000055,5.53e-12,68;UBERON:0000948,3.78e-11,24;UBERON:0005498,3.78e-11,24;UBERON:0004140,3.78e-11,24;UBERON:0009881,3.78e-11,24;UBERON:0004141,3.78e-11,24;UBERON:0003084,3.78e-11,24;UBERON:0007005,3.78e-11,24;UBERON:0004139,3.78e-11,24;UBERON:0004291,3.78e-11,24;UBERON:0000926,5.76e-10,315;UBERON:0004120,5.76e-10,315;UBERON:0006603,5.76e-10,315;UBERON:0004573,1.06e-09,33;UBERON:0004571,1.06e-09,33;UBERON:0000947,1.92e-09,21;UBERON:0010191,1.92e-09,21;UBERON:0002385,3.04e-08,64;UBERON:0001015,3.04e-08,64;UBERON:0000383,3.04e-08,64;UBERON:0001134,1.54e-07,62;UBERON:0002036,1.54e-07,62;UBERON:0003082,1.54e-07,62;UBERON:0003081,2.30e-07,203 | |||
|phase1_expression=1.09007027562334,0.642301571672949,2.96004248601539,1.0007329835313,2.68176656656373,3.48935409640147,0,0.631719873426831,0,0.245733936501509,0,0.436882744260345,0,1.11389717664042,0.662794751455832,5.3786011716142,5.42425075221579,1.46062018077475,3.90346239032406,0,0.816002764977012,0,1.14494394852423,0.821246550437305,0.753255837568817,0,0,0,0.786728553697808,1.15148819429164,0.154816123316076,0,0,0,0.0774672005803016,0,1.76160263600908,0.553995408531877,0,0,0.447830948479849,0,0.257575567634187,0.145398238779565,0,0,0,0.822335776043652,0.929119112685311,0,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0.398927315243264,0.852449501065388,0,0,0,0.75374599577023,0.521482918420201,0.217188844705117,1.21079900526674,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,3.36305137788922,3.16060901730092,0.393419540227666,1.96505381374582,3.28962398399215,1.33749196312542,0,0.473447805734733,0,2.56244050835899,0.294605907474837,0.443067789167242,1.89562704635511,0.768547918354051,0.650296737799391,3.4531959966772,2.76350017785848,3.47763702882063,0.14828656316206,0,0,2.71942422474159,0.766440987203842,2.40539211837841,4.04831507231205,0.637130828648193,1.95325036156926,0,1.35517607169996,1.53583933385302,1.24930726552346,1.18388626022008,0,0.604820229674197,0.802320587350522,1.59306844271079,0,3.35350429851818,3.45228916977532,0.722878304769133,0.50133791063589,0.869079113764942,2.3858578411533,0,1.98523116044542,3.54767035940102,3.60122621341817,3.07800827419625,0,0,0,0,0,0,0,0,2.18638648103376,3.4409383804245,1.04142150482278,5.6530794192401,4.61449379830897,3.30141650328081,1.25396979922086,1.29208379584664,2.49036383880697,1.33888245105868,0.402829317109147,0,0.488124115096339,1.10298924103761,0,0.714397826272638,1.12264686313085,1.35133776579987,0,1.89853131913626,2.74802615895611,0,0,0,5.4666914686485,3.67228483827281,28.3355646940288,16.0628507619336,1.77334191099179,3.36406560085384,5.33744978648525,2.4666754841716,6.53543174339509,4.44545217829971,5.23078089963068,1.21085942115945,2.88087962239999,0.234321431833797,0.624320153660641,0.570471821544449,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0.516628905878827,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.375355559615893,0.554128230968366,0.877955241761676,0.612975591598039,0.901428353439581,1.47461838108027,4.48474089222155,1.70845911054854,0.847727604638247,3.60109315301283,1.8549455262919,3.86460810068444,1.11670113798954,9.95780360223471,2.04617710838517,7.57301322732343,1.28869858099219,2.42469085228218,13.845374108148,3.02256294682921,1.69560592310488,0.57978255948989,0,0,0,0,0.232387885739037,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,1.47008711385542,0,0,0,0.882926198829301,0,2.57351715447788,0.109750285408626,0,0.100528972411631,0,0,0,0,0.579652024875384,9.39269553886573,0.144366447761074,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0,3.4486426652716,2.99364675644969,2.48793738648926,3.17063897517315,1.76739406796932,0,0,0,0,0,0,0,0.448524337381443,1.74384027533312,0.5867062865676,10.2124655448644,0,0.845302752556,7.44626726437637,4.16029747645464,0.257207374262142,0,0,4.71827379071887,3.25572963234866,0,0.325736184293735,4.26470338491055,1.58390374586686,6.63166629531089,3.48613383440118,10.3971910829339,0,0,0,3.35474797688216,4.59447743336456,0,1.15825045334063,0.205476322550383,1.61154866915906,0.224170287987055,1.97030760201927,1.50939302401662,1.28343036279748,0.76228387266739,1.30139853857622,0,0.167516265334349,0.637938751653163,0,2.99161459204025,1.24324654030811,0.736148950314839,1.00034104211935,1.35632511849868,2.28767947683888,2.14114786556594,1.41932173530541,2.57711112983969,0.601892199455438,0,0,3.98535359121262,1.10621501125022,1.39013783148933,0.195801157462741,0,0.620304078368662,1.2942852049117,1.60091336705167,0,1.66435439510497,0.604780586659361,3.96972492510043,8.44040853084343,2.52594084989766,5.63812256725084,2.04682899626681,4.98647155545183,0,0.308419387605311,1.06537035187876,0.739144404124282,0.519254429183621,0.464841513839837,0,0.200506470303285,0,1.37777337797528,1.45672934405374,1.18011973463482,0,0,0,0,0,0,1.02056223165909,1.0795795805107,0,0.270946437543853,0.501689773854853,0,0,0,0.877039506583738,0,0.256450125116389,1.31205858279882,0.325378394664303,0.721287081534056,0.183138929636687,0.082509499920588,0,0,6.42735719376638,0.386682873168488,0.462145851343933,0.460511024178389,0.689182862422653,0.644521469209642,0.290033387828457,0.255679882248303,0.979352392114111,0,0.192190067365106,0.127612712494584,0,0,22.6664889718061,2.0911118104818,2.15623506123262,2.66153015158511,1.73986598415015,1.8532421910392,2.28999818787186,1.116475108079,8.85862389212432,4.00323407240032,0.255897791311334,1.28381696410176,2.22742273548156,0.7849486401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| |||
|short_description=p8@MACF1 | |||
}} |
Latest revision as of 23:33, 17 September 2015
Short description: | p8@MACF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MACF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 171bp_to_ENST00000536367, uc010oit.1_5end |
EntrezGene: | MACF1 |
HGNC: | 13664 |
UniProt: | B4E2T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.61e-10 | 43 |
smooth muscle myoblast | 3.61e-10 | 43 |
vascular associated smooth muscle cell | 4.69e-10 | 32 |
mesodermal cell | 7.03e-08 | 121 |
muscle precursor cell | 3.63e-07 | 58 |
myoblast | 3.63e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.63e-07 | 58 |
muscle cell | 4.10e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.82e-08 | 14 |