FFCP PHASE1:Hg19::chr20:48184638..48184694,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5740 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9603 | |||
|TSSclassifier=strong | |||
|UniProt=Q16647 | |||
|association_with_transcript=0bp_to_ENST00000244043,ENST00000478764,ENST00000478971_5end | |||
|cluster_id=chr20:48184638..48184694,- | |||
|coexpression_cluster_id=C517 | |||
|description=CAGE_peak_1_at_PTGIS_5end | |||
|id=chr20:48184638..48184694,- | |||
|ontology_enrichment_celltype=CL:0000055!4.73e-23!180;CL:0000680!1.97e-15!57;CL:0000056!1.97e-15!57;CL:0000355!1.97e-15!57;CL:0000393!2.62e-15!60;CL:0000211!2.62e-15!60;CL:0000187!2.79e-15!54;CL:0000183!7.49e-15!59;CL:0000192!2.54e-13!42;CL:0000514!2.54e-13!42;CL:0000057!1.26e-12!75;CL:0000359!3.87e-12!32;CL:0000222!1.16e-09!119;CL:0002494!1.85e-08!16;CL:0002334!3.41e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.54e-12;32!CL:0000192;3.97e-10;43!CL:0002494;1.82e-09;16!CL:0000187;4.56e-08;55!CL:0002334;5.32e-08;12!CL:0000393;6.16e-08;61!CL:0000211;6.16e-08;61!CL:0000499;4.39e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.95e-15,58;CL:0000056,5.95e-15,58;CL:0000355,5.95e-15,58;CL:0000187,1.00e-14,55;CL:0000393,2.17e-14,61;CL:0000211,2.17e-14,61;CL:0000192,1.05e-13,43;CL:0000514,1.05e-13,43;CL:0000359,5.61e-13,32;CL:0000057,4.41e-11,76;CL:0002494,1.82e-09,16;CL:0000222,3.06e-08,121;CL:0002334,5.10e-08,12;CL:0000499,4.13e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;3.97e-10;43!CL:0000355;3.10e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.89e-17!63;UBERON:0001015!1.89e-17!63;UBERON:0000383!1.89e-17!63;UBERON:0001134!1.35e-16!61;UBERON:0002036!1.35e-16!61;UBERON:0003082!1.35e-16!61;UBERON:0004872!1.34e-14!84;UBERON:0004290!2.71e-14!70;UBERON:0007100!7.08e-14!27;UBERON:0000914!1.88e-13!83;UBERON:0002329!1.88e-13!83;UBERON:0003077!1.88e-13!83;UBERON:0003059!1.88e-13!83;UBERON:0007282!1.88e-13!83;UBERON:0009618!1.88e-13!83;UBERON:0007285!1.88e-13!83;UBERON:0000948!1.25e-12!24;UBERON:0005498!1.25e-12!24;UBERON:0004140!1.25e-12!24;UBERON:0009881!1.25e-12!24;UBERON:0004141!1.25e-12!24;UBERON:0003084!1.25e-12!24;UBERON:0007005!1.25e-12!24;UBERON:0004139!1.25e-12!24;UBERON:0004291!1.25e-12!24;UBERON:0001637!2.64e-11!42;UBERON:0003509!2.64e-11!42;UBERON:0004572!2.64e-11!42;UBERON:0001009!3.05e-11!113;UBERON:0000486!4.41e-11!82;UBERON:0002049!8.19e-11!79;UBERON:0007798!8.19e-11!79;UBERON:0000475!1.07e-10!365;UBERON:0004535!2.64e-10!110;UBERON:0001981!8.45e-10!60;UBERON:0007500!8.45e-10!60;UBERON:0004537!8.45e-10!60;UBERON:0006965!8.45e-10!60;UBERON:0002100!1.56e-09!216;UBERON:0000481!1.61e-09!347;UBERON:0004573!1.80e-09!33;UBERON:0004571!1.80e-09!33;UBERON:0005256!2.63e-09!143;UBERON:0003914!8.86e-09!118;UBERON:0000055!3.03e-08!69;UBERON:0000490!4.71e-08!138;UBERON:0000119!1.14e-07!312;UBERON:0000477!2.46e-07!286;UBERON:0007023!2.48e-07!115;UBERON:0000483!2.84e-07!309;UBERON:0004458!7.73e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.05e-14;25!UBERON:0000948;5.49e-13;22!UBERON:0004573;1.64e-09;33!UBERON:0004571;1.64e-09;33!UBERON:0001637;5.31e-08;42!UBERON:0003509;5.31e-08;42!UBERON:0004572;5.31e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,3.39e-17,64;UBERON:0001015,3.39e-17,64;UBERON:0000383,3.39e-17,64;UBERON:0001134,2.95e-16,62;UBERON:0002036,2.95e-16,62;UBERON:0003082,2.95e-16,62;UBERON:0007100,1.13e-15,27;UBERON:0007524,1.34e-14,73;UBERON:0000948,3.03e-14,24;UBERON:0005498,3.03e-14,24;UBERON:0004140,3.03e-14,24;UBERON:0009881,3.03e-14,24;UBERON:0004141,3.03e-14,24;UBERON:0003084,3.03e-14,24;UBERON:0007005,3.03e-14,24;UBERON:0004139,3.03e-14,24;UBERON:0004291,3.03e-14,24;UBERON:0003077,4.59e-14,72;UBERON:0007285,4.59e-14,72;UBERON:0002329,5.22e-14,71;UBERON:0003059,5.22e-14,71;UBERON:0007282,5.22e-14,71;UBERON:0004290,5.22e-14,71;UBERON:0009618,5.22e-14,71;UBERON:0004872,5.25e-14,83;UBERON:0005256,2.57e-12,122;UBERON:0003104,5.86e-12,160;UBERON:0009142,5.86e-12,160;UBERON:0001637,1.28e-11,42;UBERON:0003509,1.28e-11,42;UBERON:0004572,1.28e-11,42;UBERON:0007503,1.63e-11,78;UBERON:0000486,4.85e-11,83;UBERON:0004573,6.22e-11,33;UBERON:0004571,6.22e-11,33;UBERON:0001009,1.94e-10,112;UBERON:0002100,3.81e-10,199;UBERON:0004535,1.87e-09,109;UBERON:0007500,1.95e-09,59;UBERON:0001981,1.95e-09,59;UBERON:0004537,1.95e-09,59;UBERON:0006965,1.95e-09,59;UBERON:0003914,1.97e-09,117;UBERON:0002049,1.93e-08,78;UBERON:0007798,1.93e-08,78;UBERON:0003103,3.73e-07,68;UBERON:0000490,7.08e-07,148 | |||
|phase1_expression=82.4819841888327,23.7651581518991,141.518221712355,49.0359161930339,35.756887554183,130.850778615055,5.06599756336621,6.31719873426831,15.9323233201902,0.737201809504527,0,0,0.527533956456907,11.7578035312044,22.8664189252262,2.01697543935533,1.20538905604795,0,1.46379839637152,15.2670112015217,35.9041216589885,11.5978246946892,0.286235987131057,0.273748850145768,0.376627918784408,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0,0,3.87796785972314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0.445641827540694,0,0.221533894583621,0,0.896639238079726,0.520237390239513,3.94650971048823,2.21080014228679,0.869409257205157,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.2659225679093,105.300034973471,124.665997797442,18.0719576192283,15.0401373190767,24.7687547423009,0,21.411934293316,18.056150078337,18.8469987843179,12.2968699970376,21.0876311551317,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.550236083880135,0.417989933073621,0,0,0.33472061276467,0.402829317109147,0,0,0,1.62028389576352,1.16089646769304,1.12264686313085,1.35133776579987,0,0,0,0,0,0,123.249044020439,107.382673891564,101.955069226178,374.034953456453,164.920797722236,127.834492832446,96.0740961567345,15.7867230986982,15.2493407345885,9.0256150286691,6.86539993076527,9.98959022456547,14.404398112,0.234321431833797,0,0.570471821544449,1.34503812496621,0,0,0,0.204154171254893,0.245668634623536,3.09977343527296,14.2560342873846,3.95627086845691,0.910161361938026,0.718618141816238,0.841680569770331,0.625592599359821,0.277064115484183,0,2.14541457059314,11.4180924769014,24.9550802952046,3.04962380671065,4.69826255400848,27.551147150743,60.9184925051337,51.6293171484579,6.95629458123199,13.7726473685376,18.9029492110218,14.8104247845022,36.6028972653966,59.1880848269985,48.3321709888248,7.10019185033229,2.01504196455281,6.44330250779853,0,0,0,3.29329006549908,3.44577397635862,3.48581828608555,3.10983165046111,2.77552935963191,4.01475094983413,3.12899064659632,5.14592750554308,1.38134921352481,3.25057549622385,5.0531563716871,0,0,0,0,0,0,0,0,0,0,2.80483547606892,122.649055376757,49.9829618710843,0,0.982827216677626,3.54473944008842,0,0.368965315629341,5.49016992955282,0,0,0,0,0.325808305310325,0,1.44331342025273,1.507095264676,55.4169036793078,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.288239906833923,0.6312121671319,0,0,0,0,0,0,0,3.7003257833969,25.2856839923302,2.42016343209135,4.91232519879556,3.57656445851882,0,0,0,0,0,0.266422179016099,29.024532712604,0.542621605391443,0,0,22.0343008220378,0,620.965116742747,237.05710073928,444.080026830697,0,0,0,3.59437283237374,12.6348129417525,8.5582143024431,4.1986578933598,1.2328579353023,2.14873155887875,0,0,0,0,0,0,0.773288812777695,1.00509759200609,1.91381625495949,0,0,0,28.5871175705596,6.5022167737758,5.69656549769445,16.0137563378721,12.6684582045985,5.67728694122165,14.5255354590964,66.2081419400982,56.8518760139962,25.8682678231262,2.65690239414175,7.74350507875153,19.5488132553186,4.50342662164303,6.86286847621712,0,0,0,0,0,0.907170879989041,231.2364768871,53.8651526241099,98.2310330515757,264.222925765255,130.997055761076,168.574909358501,204.816931694088,3.70103265126373,47.2314189332918,21.1888062515628,4.67328986265259,10.3427236829364,0,0,0,29.5073131783039,22.2151224968195,39.5995733177461,0,0,0,0,0,0,0,0,0,0.541892875087706,2.00675909541941,0,0,0,0,0,1.02580050046556,65.2749144942414,5.20605431462885,10.6132241997154,0,0,0,0,139.795018964419,7.0569624353249,0.154048617114644,0.460511024178389,0.551346289938122,2.36324538710202,2.17525040871343,3.32383846922794,12.2864209192498,0,0.192190067365106,0,0,18.5938219718914,99.4807015984823,23.0022299152998,57.6022794929286,83.5720467597724,26.0979897622522,60.230371208774,56.2480804896026,20.096551945422,37.3327721168097,6.86268698125769,4.09436466098134,0.855877976067841,181.057648069858,86.3443504219153,1.61885211824983,2.74537029736055,1.41374882814824,89.566839336979,69.7445413161236,25.6967658305778,2.43816869544795,103.334519603665,33.8080469621617,4.64099698787152,41.9974132902527,235.056882570105,300.494112232638,228.886446458221,104.789761575649,2.89387767133344,6.55894752046633,23.9434244815991,16.7304688973865,10.4227372936929,0.286822704408103,0.0982490410131212,21.7569341403563,11.3523540502591,461.270183125396,397.129640909642,0.379473173765715,0.349934720244983,0,2.01090682660736,0,9.79095528078503,0,0,0,0,0,0,0,0,0,0,0,0,2.13648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.564043753559,0,0,0,1.19372242368845,5.04839957415486,1.22864280839693,0,0,0,0,0,175.338229660941,18.787306256118,0.251932747854276,0,0,66.8735113472886,0.179736702294654,0,0,153.094565548521,0,0,0,0.834912883456661,1.99613798001194,0,0,66.699960940001,0,0,0,0,0,0.173624994933292,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| |||
|short_description=p1@PTGIS | |||
}} |
Latest revision as of 19:33, 16 September 2015
Short description: | p1@PTGIS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTGIS_5end |
Coexpression cluster: | C517_Mesothelial_Synoviocyte_mesothelioma_Fibroblast_Smooth_Preadipocyte_tenocyte |
Association with transcript: | 0bp_to_ENST00000244043, ENST00000478764, ENST00000478971_5end |
EntrezGene: | PTGIS |
HGNC: | 9603 |
UniProt: | Q16647 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.95e-15 | 58 |
myoblast | 5.95e-15 | 58 |
multi-potent skeletal muscle stem cell | 5.95e-15 | 58 |
muscle cell | 1.00e-14 | 55 |
electrically responsive cell | 2.17e-14 | 61 |
electrically active cell | 2.17e-14 | 61 |
smooth muscle cell | 1.05e-13 | 43 |
smooth muscle myoblast | 1.05e-13 | 43 |
vascular associated smooth muscle cell | 5.61e-13 | 32 |
fibroblast | 4.41e-11 | 76 |
cardiocyte | 1.82e-09 | 16 |
mesodermal cell | 3.06e-08 | 121 |
preadipocyte | 5.10e-08 | 12 |
stromal cell | 4.13e-07 | 28 |