FFCP PHASE1:Hg19::chr9:12695636..12695648,+: Difference between revisions
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|id=chr9:12695636..12695648,+
|short_description=p11@TYRP1
|description=CAGE_peak_11_at_TYRP1_5end
|association_with_transcript=-71bp_to_ENST00000381136_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQI3 | |UniProt=E7EQI3 | ||
|association_with_transcript=-71bp_to_ENST00000381136_5end | |||
|cluster_id=chr9:12695636..12695648,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_11_at_TYRP1_5end | |||
|id=chr9:12695636..12695648,+ | |||
|ontology_enrichment_celltype=CL:0000148!2.89e-43!10;CL:0000541!2.89e-43!10;CL:0000147!9.14e-40!14;CL:0002567!1.75e-27!3;CL:0000710!2.64e-21!20;CL:0000325!4.07e-17!39;CL:0002077!2.99e-16!33;CL:0000075!1.36e-15!27;CL:0002566!2.59e-10!1;CL:0000149!8.26e-10!4;CL:0000333!1.67e-09!41;CL:0000221!8.99e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.37e-96;10!CL:0000147;4.79e-69;14!CL:0002567;9.99e-60;3!CL:0000710;2.29e-48;20!CL:0000075;7.74e-36;27!CL:0002077;4.39e-25;34!CL:0002566;4.22e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.47e-96,10;CL:0000541,1.47e-96,10;CL:0000147,5.04e-69,14;CL:0002567,9.99e-60,3;CL:0000710,2.37e-48,20;CL:0000075,7.94e-36,27;CL:0002077,1.90e-28,34;CL:0000333,1.77e-22,41;CL:0002566,4.22e-21,1;CL:0000133,8.36e-16,59;CL:0000221,5.42e-13,72 | |||
|ontology_enrichment_development_v019=CL:0000133;1.04e-08;59!UBERON:0003056;8.02e-08;3!CL:0000221;2.36e-07;72 | |||
|ontology_enrichment_disease=DOID:1909!1.43e-18!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.30e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.09e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001003!4.22e-10!14;UBERON:0007376!4.22e-10!14;UBERON:0007383!4.22e-10!14;UBERON:0000989!4.44e-10!1;UBERON:0008811!4.44e-10!1;UBERON:0006258!4.44e-10!1;UBERON:0005876!4.44e-10!1;UBERON:0004874!4.44e-10!1;UBERON:0007029!4.85e-10!1;UBERON:0003112!9.82e-10!1;UBERON:0000032!9.82e-10!1;UBERON:0005253!9.82e-10!1;UBERON:0003128!9.82e-10!1;UBERON:0002241!9.82e-10!1;UBERON:0001703!9.82e-10!1;UBERON:0004761!9.82e-10!1;UBERON:0009617!9.82e-10!1;UBERON:0000966!7.01e-08!5;UBERON:0005388!7.01e-08!5;UBERON:0001802!7.01e-08!5 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p11@TYRP1 | |||
}} | }} |
Latest revision as of 23:39, 24 September 2015
Short description: | p11@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -71bp_to_ENST00000381136_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | E7EQI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.47e-96 | 10 |
melanoblast | 1.47e-96 | 10 |
pigment cell | 5.04e-69 | 14 |
light melanocyte | 9.99e-60 | 3 |
neurecto-epithelial cell | 2.37e-48 | 20 |
columnar/cuboidal epithelial cell | 7.94e-36 | 27 |
ecto-epithelial cell | 1.90e-28 | 34 |
migratory neural crest cell | 1.77e-22 | 41 |
dark melanocyte | 4.22e-21 | 1 |
neurectodermal cell | 8.36e-16 | 59 |
ectodermal cell | 5.42e-13 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.09e-11 | 2 |