FFCP PHASE1:Hg19::chr22:25202192..25202227,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=129049 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29410 | |||
|TSSclassifier=strong | |||
|UniProt=C9J7S8 | |||
|association_with_transcript=4bp_to_ENST00000403206_5end | |||
|cluster_id=chr22:25202192..25202227,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SGSM1_5end | |||
|id=chr22:25202192..25202227,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.22e-14;82!UBERON:0002532;3.76e-07;206!UBERON:0010316;3.76e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.09e-51!115;UBERON:0001049!6.14e-34!57;UBERON:0005068!6.14e-34!57;UBERON:0006241!6.14e-34!57;UBERON:0007135!6.14e-34!57;UBERON:0001017!2.62e-28!82;UBERON:0002616!6.72e-28!59;UBERON:0005743!1.07e-27!86;UBERON:0002780!1.17e-27!41;UBERON:0001890!1.17e-27!41;UBERON:0006240!1.17e-27!41;UBERON:0003080!1.54e-26!42;UBERON:0000073!1.69e-26!94;UBERON:0001016!1.69e-26!94;UBERON:0003075!2.50e-26!86;UBERON:0007284!2.50e-26!86;UBERON:0002346!1.53e-24!90;UBERON:0000955!5.53e-24!69;UBERON:0006238!5.53e-24!69;UBERON:0002020!1.40e-22!34;UBERON:0003528!1.40e-22!34;UBERON:0001893!1.74e-22!34;UBERON:0002791!1.23e-21!33;UBERON:0001869!2.68e-21!32;UBERON:0002619!2.33e-19!22;UBERON:0001950!7.36e-18!20;UBERON:0003056!6.52e-17!61;UBERON:0000956!9.02e-16!25;UBERON:0000203!9.02e-16!25;UBERON:0004121!1.92e-12!169;UBERON:0000924!7.83e-12!173;UBERON:0006601!7.83e-12!173;UBERON:0000153!2.12e-10!129;UBERON:0007811!2.12e-10!129;UBERON:0000033!2.08e-09!123;UBERON:0000064!4.25e-09!219;UBERON:0000025!1.58e-08!194;UBERON:0003076!1.66e-08!15;UBERON:0003057!1.66e-08!15;UBERON:0002308!2.25e-08!9;UBERON:0000125!2.25e-08!9;UBERON:0002420!2.70e-08!9;UBERON:0007245!2.70e-08!9;UBERON:0010009!2.70e-08!9;UBERON:0010011!2.70e-08!9;UBERON:0000454!2.70e-08!9;UBERON:0001871!1.64e-07!7;UBERON:0004732!5.31e-07!13;UBERON:0009663!9.36e-07!7;UBERON:0004111!9.81e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.87e-34;41!UBERON:0001890;2.87e-34;41!UBERON:0001869;5.24e-33;32!UBERON:0003528;5.26e-33;34!UBERON:0002020;5.26e-33;34!UBERON:0001893;5.63e-33;34!UBERON:0002791;1.73e-32;32!UBERON:0002619;5.82e-32;22!UBERON:0000073;1.05e-31;53!UBERON:0002616;1.05e-31;53!UBERON:0001950;2.05e-29;20!UBERON:0000956;2.81e-27;25!UBERON:0000203;2.81e-27;25!UBERON:0000955;3.85e-21;68!UBERON:0001017;1.43e-20;75!UBERON:0007023;4.85e-19;114!UBERON:0001016;2.14e-18;83!UBERON:0000125;4.04e-13;9!UBERON:0002308;4.04e-13;9!UBERON:0002420;5.61e-13;9!UBERON:0007245;5.61e-13;9!UBERON:0010009;5.61e-13;9!UBERON:0010011;5.61e-13;9!UBERON:0000454;5.61e-13;9!UBERON:0004732;1.01e-10;13!UBERON:0009663;2.19e-10;7!UBERON:0001871;2.30e-10;6!UBERON:0000922;3.22e-10;49!UBERON:0001894;3.32e-10;7!UBERON:0000200;6.15e-10;6!UBERON:0004733;6.16e-10;12!UBERON:0002028;6.16e-10;12!UBERON:0002298;9.88e-10;6!UBERON:0011216;5.47e-09;132!UBERON:0002021;2.12e-08;5!UBERON:0001872;2.34e-08;5!UBERON:0000349;3.37e-08;5!UBERON:0000369;1.95e-07;4!UBERON:0002435;1.95e-07;4!UBERON:0000204;1.95e-07;4!UBERON:0003296;5.38e-07;4!UBERON:0010133;5.38e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.72e-67,114;UBERON:0001049,5.20e-60,56;UBERON:0005068,5.20e-60,56;UBERON:0006241,5.20e-60,56;UBERON:0007135,5.20e-60,56;UBERON:0000073,2.87e-56,53;UBERON:0002616,2.87e-56,53;UBERON:0001017,1.71e-51,81;UBERON:0001016,1.36e-49,89;UBERON:0002780,1.39e-47,41;UBERON:0001890,1.39e-47,41;UBERON:0003080,1.39e-47,41;UBERON:0006240,1.39e-47,41;UBERON:0000955,8.28e-46,68;UBERON:0006238,8.28e-46,68;UBERON:0003075,6.73e-44,82;UBERON:0007284,6.73e-44,82;UBERON:0002346,5.99e-41,86;UBERON:0003528,7.11e-39,34;UBERON:0002020,7.11e-39,34;UBERON:0001893,1.04e-38,34;UBERON:0001869,1.12e-36,32;UBERON:0002791,4.47e-36,32;UBERON:0010371,6.32e-33,104;UBERON:0002619,7.64e-32,22;UBERON:0003056,9.78e-31,61;UBERON:0010314,1.89e-29,132;UBERON:0001950,2.77e-29,20;UBERON:0000956,3.55e-27,25;UBERON:0000203,3.55e-27,25;UBERON:0004121,3.60e-22,171;UBERON:0000924,3.60e-22,171;UBERON:0006601,3.60e-22,171;UBERON:0011216,6.47e-22,223;UBERON:0000025,1.20e-14,192;UBERON:0003076,2.93e-13,15;UBERON:0003057,2.93e-13,15;UBERON:0000125,3.88e-13,9;UBERON:0002308,3.88e-13,9;UBERON:0002420,5.30e-13,9;UBERON:0007245,5.30e-13,9;UBERON:0010009,5.30e-13,9;UBERON:0010011,5.30e-13,9;UBERON:0000454,5.30e-13,9;UBERON:0004732,1.02e-10,13;UBERON:0009663,2.13e-10,7;UBERON:0001871,2.75e-10,6;UBERON:0001894,3.80e-10,7;UBERON:0006222,3.80e-10,7;UBERON:0000200,6.30e-10,6;UBERON:0004733,6.39e-10,12;UBERON:0002028,6.39e-10,12;UBERON:0007277,6.39e-10,12;UBERON:0002298,1.03e-09,6;UBERON:0004111,1.11e-09,240;UBERON:0002021,2.27e-08,5;UBERON:0001872,2.63e-08,5;UBERON:0000349,3.18e-08,5;UBERON:0000369,2.01e-07,4;UBERON:0002435,2.01e-07,4;UBERON:0000204,2.01e-07,4;UBERON:0010082,2.01e-07,4;UBERON:0000483,3.98e-07,306;UBERON:0000922,3.99e-07,592;UBERON:0003296,5.52e-07,4;UBERON:0010133,5.52e-07,4;UBERON:0000119,6.91e-07,309 | |||
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| |||
|short_description=p1@SGSM1 | |||
}} |
Latest revision as of 11:33, 19 September 2015
Short description: | p1@SGSM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SGSM1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 4bp_to_ENST00000403206_5end |
EntrezGene: | SGSM1 |
HGNC: | 29410 |
UniProt: | C9J7S8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data