FFCP PHASE1:Hg19::chr22:45688894..45688936,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr22:45688894..45688936,+ | |||
|coexpression_cluster_id=C1866 | |||
|description=CAGE_peak_at_chr22:45688894..45688936,+ | |||
|id=chr22:45688894..45688936,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.71e-49!42;CL:0000860!7.55e-46!45;CL:0002194!6.82e-34!63;CL:0000576!6.82e-34!63;CL:0000040!6.82e-34!63;CL:0000559!6.82e-34!63;CL:0000763!9.88e-34!112;CL:0000049!9.88e-34!112;CL:0002009!1.06e-32!65;CL:0000557!1.63e-32!71;CL:0000839!5.11e-30!70;CL:0000037!2.41e-28!172;CL:0000566!2.41e-28!172;CL:0000766!2.94e-27!76;CL:0000988!2.20e-26!182;CL:0000738!1.56e-23!140;CL:0002032!9.20e-21!165;CL:0000837!9.20e-21!165;CL:0002087!6.75e-19!119;CL:0000784!9.66e-16!3;CL:0000451!5.13e-15!10;CL:0002031!9.60e-15!124;CL:0002393!6.47e-13!9;CL:0002397!6.47e-13!9;CL:0000134!1.02e-09!358;CL:0002320!2.19e-09!365;CL:0000453!1.24e-08!5;CL:0000990!2.32e-08!8;CL:0000219!3.23e-08!390;CL:0000048!1.51e-07!430;CL:0000723!2.46e-07!436;CL:0000875!4.08e-07!3;CL:0002396!4.08e-07!3;CL:0000842!4.21e-07!3;CL:0000034!4.60e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000784;4.83e-30;3!CL:0002032;3.67e-23;1!CL:0000557;3.67e-23;1!CL:0000047;2.74e-12;2!CL:0000451;6.10e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.84e-30,3;CL:0000451,6.10e-09,10;CL:0000037,4.03e-08,168;CL:0000988,1.08e-07,177;CL:0000763,2.80e-07,108;CL:0000049,2.80e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;5.36e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.95e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.64e-32!102;UBERON:0003061!4.64e-32!102;UBERON:0002371!6.37e-31!80;UBERON:0002193!1.21e-28!112;UBERON:0001474!2.18e-28!86;UBERON:0002405!1.46e-23!115;UBERON:0004765!2.33e-23!101;UBERON:0001434!2.33e-23!101;UBERON:0002204!6.15e-12!167;UBERON:0003081!8.31e-12!216;UBERON:0002384!6.20e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.697287110717054,0.411167888021826,0,0.575384784644301,0,0.236482229888585,0.689491361473237,0,0,0,0.272906150057846,0,1.22433556948361,0,0,0,0.398927315243264,0,0,1.13477044938228,0.622822248995575,0,0,0.217188844705117,0,0.368277635987565,0,0.422510572623884,0,0.209658645508376,0.336985893439485,0,0.32145117339416,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953962497221368,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,2.05411211129873,0.313359791546046,0,0,5.94175877883688,4.237793851012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr22:45688894..45688936,+ | |||
}} |
Latest revision as of 22:03, 28 July 2015
Short description: | p@chr22:45688894..45688936, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:45688894..45688936, + |
Coexpression cluster: | C1866_acute_testis_mesothelioma_serous_CD4_Basophils_embryonic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.84e-30 | 3 |
dendritic cell | 6.10e-09 | 10 |
hematopoietic stem cell | 4.03e-08 | 168 |
hematopoietic cell | 1.08e-07 | 177 |
myeloid cell | 2.80e-07 | 108 |
common myeloid progenitor | 2.80e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.95e-07 | 31 |