FFCP PHASE1:Hg19::chr2:102091514..102091528,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=731220 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37253 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZV50,E9PDA6 | |||
|association_with_transcript=-349bp_to_ENST00000428343,ENST00000481179,NM_001145664,uc002tbb.1,uc010yvx.1_5end | |||
|cluster_id=chr2:102091514..102091528,- | |||
|coexpression_cluster_id=C4110 | |||
|description=CAGE_peak_6_at_RFX8_5end | |||
|id=chr2:102091514..102091528,- | |||
|ontology_enrichment_celltype=CL:0000048!4.12e-26!430;CL:0000034!2.19e-25!444;CL:0000723!3.72e-25!436;CL:0000134!1.77e-19!358;CL:0002320!2.00e-18!365;CL:0000219!1.40e-16!390;CL:0002620!1.31e-14!23;CL:0000055!1.84e-14!180;CL:0000057!1.87e-13!75;CL:0002371!1.07e-11!591;CL:0000144!9.91e-10!625;CL:0002551!2.77e-08!6;CL:0000763!3.30e-08!112;CL:0000049!3.30e-08!112;CL:0000188!1.02e-07!9;CL:0002570!3.48e-07!8;CL:0000012!5.28e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.62e-15;23!CL:0002582;2.86e-12;3!CL:0002551;2.32e-10;6!CL:0001014;8.80e-09;2!CL:0002583;8.80e-09;2!CL:0001016;8.80e-09;2!CL:0002334;7.06e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.53e-15,23;CL:0000048,2.94e-13,427;CL:0000723,6.28e-13,433;CL:0000034,1.67e-12,441;CL:0000134,3.35e-12,354;CL:0000219,5.98e-12,386;CL:0002582,6.44e-12,3;CL:0002320,8.97e-12,361;CL:0002551,1.10e-10,6;CL:0000057,2.81e-09,76;CL:0001014,7.57e-09,2;CL:0001016,7.57e-09,2;CL:0002583,1.21e-08,2;CL:0002334,1.09e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.23e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.31e-17!375;UBERON:0002204!1.10e-10!167;UBERON:0002199!3.63e-10!45;UBERON:0002416!3.63e-10!45;UBERON:0002097!9.09e-09!40;UBERON:0000914!9.10e-09!83;UBERON:0002329!9.10e-09!83;UBERON:0003077!9.10e-09!83;UBERON:0003059!9.10e-09!83;UBERON:0007282!9.10e-09!83;UBERON:0009618!9.10e-09!83;UBERON:0007285!9.10e-09!83;UBERON:0004290!3.00e-08!70;UBERON:0002067!6.25e-07!9;UBERON:0004016!6.25e-07!9;UBERON:0010083!6.25e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;2.38e-10;9!UBERON:0002199;1.10e-07;46!UBERON:0002416;1.10e-07;46!UBERON:0002097;1.75e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.70e-11,46;UBERON:0002416,1.70e-11,46;UBERON:0002384,3.43e-11,371;UBERON:0002067,1.29e-10,9;UBERON:0004016,1.29e-10,9;UBERON:0010083,1.29e-10,9;UBERON:0002097,2.32e-09,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,1.20538905604795,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,2.46700732813095,3.09706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,1.29096936716765,1.35426486594342,1.69418105588344,0.545812300115692,0.224723484445085,0.918251677112708,0.962787081228281,0,0,0,0,0.290209238628584,0.56738522469114,0,0.75374599577023,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3858578411533,0.973269740605272,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0.936480230490962,0.570471821544449,2.24173020827702,1.40921398372518,1.94247533241758,1.68540968042698,0.61246251376468,0.368502951935304,0,0,0.494533858557114,0,0,0.673344455816265,0.875829639103749,0.831192346452549,0,0.30648779579902,0.150238058906597,0,4.84352016359927,0,0.635795703478686,5.10154863343484,0.824420233907511,0.515281080091258,0,2.19409231913646,0.389748020644795,1.7670364197088,0.184099797284599,0,1.42003837006646,0.806016785821122,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.381211010224,0,0,0.257207374262142,0,1.0656887160644,0,0,0,0.65147236858747,0,0.791951872933429,0,0,0,0,0,0,0,0,5.70547620162874,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0.468565659970853,0,0,0,0.664225598535437,0.921845842708516,0.434418072340414,0,0,0,0.431428401637234,0,0,0,0,0.248107807818777,0,0,0,0,0,0,2.15893571323718,1.24293207719189,1.06765302817952,3.63478100428535,1.16210378459959,0,0,0,0.229628896329213,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0,0,0,0.574265537996172,0,0,0.193341436584244,0.462145851343933,0.307007349452259,3.44591431211326,0.429680979473094,0.870100163485371,1.02271952899321,0,0,0,0,0,0,1.88887408098384,0.6970372701606,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,1.90921948755562,0,0.179872457583315,0,0.117812402345686,0.808729926293264,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797131363644112,0.798317485731266,0.766021480529467,0.423347165447766,0,1.68478306868075,0.228234679033192,0,0,0,2.24823305145179,1.61439765752838,1.27753871307098,0.687010689511529,0.307240764308458,0.671028323677248,0.166849141711909,1.75849285861836,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,2.55786185113436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09886179476517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859930162358083,0,0,0,0,0,0,1.09633539717401,0,0,0,0,0,0,0,0,0,0,0.49701014226173,0,0,0,0,0,0,0,3.83239764200917,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.895528817321244,0.701139929541673,0.554805861502613,1.13641803165053,0.50313580350515,0,0,0.604923695052956,2.02068360757615,0.295710299979268,0.477890301491107,1.34940933649081,1.39736661188633,0.414706207840855,1.59505028734797,1.04349012362347,0,0,0.406870733204662,1.09109195521536,0.107410557042488,0.464033759878494,0,0,0.343395705182793,2.02049693259551,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,1.47284760201473,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,1.3807198521202,0.198916222116275,0,0,0,0,0,0.443568258651136,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,1.53831600949735,4.26067023795788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@RFX8 | |||
}} |
Latest revision as of 00:08, 16 September 2015
Short description: | p6@RFX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RFX8_5end |
Coexpression cluster: | C4110_schwannoma_Fibroblast_Hodgkin_Skeletal_biphenotypic_myxofibrosarcoma_Preadipocyte |
Association with transcript: | -349bp_to_ENST00000428343, ENST00000481179, NM_001145664, uc002tbb.1, uc010yvx.1_5end |
EntrezGene: | RFX8 |
HGNC: | 37253 |
UniProt: | Q6ZV50E9PDA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.53e-15 | 23 |
multi fate stem cell | 2.94e-13 | 427 |
somatic stem cell | 6.28e-13 | 433 |
stem cell | 1.67e-12 | 441 |
mesenchymal cell | 3.35e-12 | 354 |
motile cell | 5.98e-12 | 386 |
visceral preadipocyte | 6.44e-12 | 3 |
connective tissue cell | 8.97e-12 | 361 |
fibroblast of dermis | 1.10e-10 | 6 |
fibroblast | 2.81e-09 | 76 |
CD1a-positive Langerhans cell | 7.57e-09 | 2 |
immature CD1a-positive Langerhans cell | 7.57e-09 | 2 |
subcutaneous preadipocyte | 1.21e-08 | 2 |
preadipocyte | 1.09e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
integument | 1.70e-11 | 46 |
integumental system | 1.70e-11 | 46 |
connective tissue | 3.43e-11 | 371 |
dermis | 1.29e-10 | 9 |
dermatome | 1.29e-10 | 9 |
future dermis | 1.29e-10 | 9 |
skin of body | 2.32e-09 | 41 |