FFCP PHASE1:Hg19::chr2:121493717..121493755,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2736 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4318 | |||
|TSSclassifier=strong | |||
|UniProt=Q1PSW9 | |||
|association_with_transcript=-67bp_to_ENST00000418323,uc002tmp.1_5end | |||
|cluster_id=chr2:121493717..121493755,+ | |||
|description=CAGE_peak_3_at_GLI2_5end | |||
|id=chr2:121493717..121493755,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.85e-30!180;CL:0000057!6.19e-15!75;CL:0000393!5.02e-12!60;CL:0000211!5.02e-12!60;CL:0000183!7.46e-12!59;CL:0000187!4.71e-11!54;CL:0000680!5.49e-11!57;CL:0000056!5.49e-11!57;CL:0000355!5.49e-11!57;CL:0000192!1.69e-08!42;CL:0000514!1.69e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.27e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.01e-13,76;CL:0000393,1.54e-07,61;CL:0000211,1.54e-07,61;CL:0002334,3.47e-07,12;CL:0000187,5.14e-07,55;CL:0000034,7.11e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.21e-13!365;UBERON:0004290!2.42e-11!70;UBERON:0001134!6.18e-11!61;UBERON:0002036!6.18e-11!61;UBERON:0003082!6.18e-11!61;UBERON:0000914!6.89e-11!83;UBERON:0002329!6.89e-11!83;UBERON:0003077!6.89e-11!83;UBERON:0003059!6.89e-11!83;UBERON:0007282!6.89e-11!83;UBERON:0009618!6.89e-11!83;UBERON:0007285!6.89e-11!83;UBERON:0002385!7.02e-11!63;UBERON:0001015!7.02e-11!63;UBERON:0000383!7.02e-11!63;UBERON:0005256!8.86e-10!143;UBERON:0000481!2.88e-09!347;UBERON:0000486!1.05e-08!82;UBERON:0002100!3.68e-08!216;UBERON:0000468!1.53e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,9.44e-08,122;UBERON:0007503,2.68e-07,78;UBERON:0007524,4.36e-07,73;UBERON:0003104,5.74e-07,160;UBERON:0009142,5.74e-07,160;UBERON:0001134,6.17e-07,62;UBERON:0002036,6.17e-07,62;UBERON:0003082,6.17e-07,62;UBERON:0002329,7.15e-07,71;UBERON:0003059,7.15e-07,71;UBERON:0007282,7.15e-07,71;UBERON:0004290,7.15e-07,71;UBERON:0009618,7.15e-07,71 | |||
|phase1_expression=1.99846217197612,2.14100523890983,1.9733616573436,2.00146596706261,0.893922188854576,1.74467704820074,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0,0,0.37129905888014,0,0,0.602694528023977,0.730310090387373,1.46379839637152,1.35433163884467,1.02000345622126,0.626909442956176,0.572471974262113,1.91624195102038,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0.722878304769133,0.50133791063589,0.289693037921647,0,1.94653948121054,1.13441780596881,0.665188192387692,0.966182642624386,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.25326102332916,1.32409180813219,2.86836620748814,1.06400514659507,1.12135520028461,2.1349799145941,1.48000529050296,0.622422070799533,0.67355336034844,1.14423332179421,1.21085942115945,0,1.17160715916898,0.312160076830321,0,0.298897361103602,1.29177948508141,0.647491777472526,0.842704840213491,0.816616685019573,1.71968044236475,0.309977343527296,0,0.494533858557114,2.73048408581408,2.15585442544872,0.841680569770331,1.87677779807946,0,0.438977620880838,1.5324389789951,0.901428353439581,0.680593098960126,3.04962380671065,1.49490172172997,0.423863802319124,1.20036438433761,0.618315175430633,1.8034837803194,0.744467425326359,1.85653965465393,1.26668106709558,1.51460264546469,1.38074847963449,1.77810662500693,0.710019185033229,1.41052937518696,0.67824236924195,0,0,0,1.70763188581434,1.85541675650079,1.39432731443422,1.34759371519982,2.01856680700503,0.72995471815166,0,1.28648187638577,1.38134921352481,0.928735856063958,0,0.354920400119532,0.505754070234305,0,0.441175890929576,0.435758888184812,0,0.134831308160164,0,0,0,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,0,0.857839051492628,0.219500570817251,0,0,0,1.62904152655162,0,0,0.927443239800615,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,1.90622843387113,1.30788020649984,0.7333828582095,1.29271715757778,3.57656445851882,2.535908257668,2.6593811658487,0,1.54324424557285,0,1.3321108950805,1.42977993658148,1.62786481617433,0,1.30294473717494,1.42156779497018,0.791951872933429,0.301439377059586,0,1.19967589418468,0,0,0,0.479249710983165,1.14861935834114,2.85273810081437,0.289562613335158,0.61642896765115,0.179060963239896,0,0,0,0,1.52456774533478,0,0.773288812777695,1.00509759200609,0,0,0,0,1.2269149171914,0.500170521059677,0,0.207970861530807,0.356857977594324,0.946214490203608,0.468565659970853,0.601892199455438,0,0,1.99267679560631,0.368738337083406,0.347534457872331,1.76221041716467,0.343143423810856,0,0,0,0,0,0,1.48864684691266,3.83654933220156,1.68396056659844,1.66580894032411,2.04682899626681,3.05622450172854,1.48418066444991,2.31314540703983,0.355123450626254,1.06765302817952,0.519254429183621,0.813472649219715,0,0,0,1.14814448164607,0.910455840033585,1.57349297951309,0.451199612907412,0.308061348417659,0,0,0.844413031143006,0,0.170093705276516,1.0795795805107,4.62681758070868,0.812839312631559,1.00337954770971,0,0,0,0,0,0.512900250232778,1.31205858279882,0.650756789328606,0.412164046590889,1.55668090191184,1.32015199872941,0,0,0,0.870036464629098,0.462145851343933,1.84204409671355,0.964856007391714,1.93356440762893,1.16013355131383,1.53407929348982,0.712256285173899,0,0,0,0,1.39453664789186,1.25924938732256,0,0.616067160352178,0.532306030317022,1.73986598415015,0,0.286249773483982,0.744316738719335,1.58189712359363,0.571890581771475,1.02359116524534,0.42793898803392,2.22742273548156,0.78494864019923,1.07923474549989,1.64722217841633,1.41374882814824,1.2130948894399,0,1.68503382495592,3.90106991271672,1.21856744815642,2.11300293513511,0.818999468447914,1.97967604735198,2.26016233240486,0,0.66343897524122,0.876901770507525,0.578775534266688,1.9676842561399,1.01455188481352,0.30982349809975,0.563391205064483,1.00387946542836,0.785992328104969,0,1.41904425628239,0.211107635297664,0,0.75894634753143,0.699869440489966,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798317485731266,0.383010740264733,0,0,1.96558024679421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.485442086998054,0,1.42068073403207,0.23874448473769,0,0,0,0.422008249231538,0.445234820091624,0,0,1.59398390600856,0.276283915531148,0,0.818149460017238,0,1.24415835064723,0.898683511473268,0,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0.568967241427498,0,0,0,0.291604613383254,0.347249989866585,3.54296554325536,0.723578631752448,0,0.774054819518572,0,0.219385397153973,0.10893846351899,0.139423744278603,1.23120413606075,0.341826167541004,0,0,0,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0.649165919226273,0.995261931078505,0.442287822516696,0.611030144933625,0,0.247127877893006,0.522109747527277,0.2696045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| |||
|short_description=p3@GLI2 | |||
}} |
Latest revision as of 18:01, 16 September 2015
Short description: | p3@GLI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GLI2_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_ENST00000418323, uc002tmp.1_5end |
EntrezGene: | GLI2 |
HGNC: | 4318 |
UniProt: | Q1PSW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.01e-13 | 76 |
electrically responsive cell | 1.54e-07 | 61 |
electrically active cell | 1.54e-07 | 61 |
preadipocyte | 3.47e-07 | 12 |
muscle cell | 5.14e-07 | 55 |
stem cell | 7.11e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 9.44e-08 | 122 |
epithelial vesicle | 2.68e-07 | 78 |
dense mesenchyme tissue | 4.36e-07 | 73 |
mesenchyme | 5.74e-07 | 160 |
entire embryonic mesenchyme | 5.74e-07 | 160 |
skeletal muscle tissue | 6.17e-07 | 62 |
striated muscle tissue | 6.17e-07 | 62 |
myotome | 6.17e-07 | 62 |
somite | 7.15e-07 | 71 |
presomitic mesoderm | 7.15e-07 | 71 |
presumptive segmental plate | 7.15e-07 | 71 |
dermomyotome | 7.15e-07 | 71 |
trunk paraxial mesoderm | 7.15e-07 | 71 |