FFCP PHASE1:Hg19::chr2:189859488..189859525,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:189859488..189859525,- | |||
|coexpression_cluster_id=C1051 | |||
|description=CAGE_peak_at_chr2:189859488..189859525,- | |||
|id=chr2:189859488..189859525,- | |||
|ontology_enrichment_celltype=CL:0000055!2.12e-31!180;CL:0000057!4.61e-21!75;CL:0000187!8.12e-18!54;CL:0000680!1.28e-17!57;CL:0000056!1.28e-17!57;CL:0000355!1.28e-17!57;CL:0000183!8.01e-17!59;CL:0000393!3.07e-14!60;CL:0000211!3.07e-14!60;CL:0000192!1.07e-12!42;CL:0000514!1.07e-12!42;CL:0002334!8.69e-09!12;CL:0000048!2.12e-08!430;CL:0000359!3.13e-08!32;CL:0000723!1.14e-07!436;CL:0000034!3.18e-07!444;CL:0002620!4.13e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002334;7.22e-11;12!CL:0000134;2.17e-09;55!CL:0000349;5.98e-09;19!CL:0000187;1.12e-08;55!CL:0000048;4.98e-08;58!CL:0000057;5.73e-08;73!CL:0000723;6.21e-08;61!CL:0000393;1.70e-07;61!CL:0000211;1.70e-07;61!CL:0000499;4.26e-07;28!CL:0000192;5.59e-07;43!CL:0002320;7.00e-07;188!CL:0002494;8.17e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.07e-21,76;CL:0000187,5.32e-16,55;CL:0000680,2.23e-15,58;CL:0000056,2.23e-15,58;CL:0000355,2.23e-15,58;CL:0000048,9.26e-15,427;CL:0000723,5.63e-14,433;CL:0000393,3.41e-13,61;CL:0000211,3.41e-13,61;CL:0000034,5.65e-13,441;CL:0002334,6.77e-11,12;CL:0000192,6.36e-10,43;CL:0000514,6.36e-10,43;CL:0000349,6.21e-09,19;CL:0002320,6.45e-08,361;CL:0000499,5.94e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;1.69e-08;58!CL:0000514;5.59e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.27e-19!83;UBERON:0002329!7.27e-19!83;UBERON:0003077!7.27e-19!83;UBERON:0003059!7.27e-19!83;UBERON:0007282!7.27e-19!83;UBERON:0009618!7.27e-19!83;UBERON:0007285!7.27e-19!83;UBERON:0002385!1.41e-18!63;UBERON:0001015!1.41e-18!63;UBERON:0000383!1.41e-18!63;UBERON:0004290!1.63e-18!70;UBERON:0001134!2.37e-18!61;UBERON:0002036!2.37e-18!61;UBERON:0003082!2.37e-18!61;UBERON:0000486!1.01e-14!82;UBERON:0005256!7.43e-13!143;UBERON:0004872!1.48e-10!84;UBERON:0002100!3.13e-09!216;UBERON:0000478!5.24e-09!24;UBERON:0000490!2.38e-08!138;UBERON:0003104!8.12e-08!238;UBERON:0009142!8.12e-08!238;UBERON:0004923!8.31e-08!57;UBERON:0000948!1.18e-07!24;UBERON:0005498!1.18e-07!24;UBERON:0004140!1.18e-07!24;UBERON:0009881!1.18e-07!24;UBERON:0004141!1.18e-07!24;UBERON:0003084!1.18e-07!24;UBERON:0007005!1.18e-07!24;UBERON:0004139!1.18e-07!24;UBERON:0004291!1.18e-07!24;UBERON:0007100!2.30e-07!27;UBERON:0001013!4.33e-07!14;UBERON:0000481!5.94e-07!347;UBERON:0005631!7.39e-07!14;UBERON:0000158!7.39e-07!14;UBERON:0000475!7.51e-07!365;UBERON:0000926!9.01e-07!448;UBERON:0004120!9.01e-07!448;UBERON:0006603!9.01e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.51e-08;24!UBERON:0001013;5.21e-08;14!UBERON:0002384;7.01e-08;198!UBERON:0004457;1.34e-07;9!UBERON:0000042;1.34e-07;9!UBERON:0003104;3.33e-07;7!UBERON:0009142;3.33e-07;7!UBERON:0003688;7.37e-07;6!UBERON:0002358;7.37e-07;6!UBERON:0003684;7.37e-07;6!UBERON:0001178;7.37e-07;6!UBERON:0002385;9.41e-07;31!UBERON:0001015;9.41e-07;31!UBERON:0000383;9.41e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.07e-16,62;UBERON:0002036,6.07e-16,62;UBERON:0003082,6.07e-16,62;UBERON:0007524,1.19e-15,73;UBERON:0002329,1.44e-15,71;UBERON:0003059,1.44e-15,71;UBERON:0007282,1.44e-15,71;UBERON:0004290,1.44e-15,71;UBERON:0009618,1.44e-15,71;UBERON:0003077,3.77e-15,72;UBERON:0007285,3.77e-15,72;UBERON:0002385,5.09e-15,64;UBERON:0001015,5.09e-15,64;UBERON:0000383,5.09e-15,64;UBERON:0000486,3.70e-13,83;UBERON:0007503,6.85e-13,78;UBERON:0003104,2.99e-11,160;UBERON:0009142,2.99e-11,160;UBERON:0005256,4.11e-10,122;UBERON:0000926,4.32e-10,315;UBERON:0004120,4.32e-10,315;UBERON:0006603,4.32e-10,315;UBERON:0004872,8.28e-09,83;UBERON:0002384,1.02e-08,371;UBERON:0000478,2.78e-08,24;UBERON:0001013,5.67e-08,14;UBERON:0000490,2.89e-07,148;UBERON:0003688,7.29e-07,6;UBERON:0002358,7.29e-07,6;UBERON:0003684,7.29e-07,6;UBERON:0001178,7.29e-07,6;UBERON:0000948,8.84e-07,24;UBERON:0005498,8.84e-07,24;UBERON:0004140,8.84e-07,24;UBERON:0009881,8.84e-07,24;UBERON:0004141,8.84e-07,24;UBERON:0003084,8.84e-07,24;UBERON:0007005,8.84e-07,24;UBERON:0004139,8.84e-07,24;UBERON:0004291,8.84e-07,24 | |||
|phase1_expression=2.90685406832891,22.6946555324442,7.89344662937438,22.0161256376887,36.6508097430376,21.8084631025092,2.53299878168311,1.26343974685366,7.83556884599516,0,0,4.58726881473362,3.69273769519835,9.0349437660834,6.95934489028623,2.6893005858071,3.01347264011988,2.92124036154949,0.975865597581014,0,0,0.626909442956176,0,0,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,18.7796240717018,7.41602858692476,10.843174571537,1.00267582127178,17.9609683511421,0,13.1391414981712,0,0,0.087834785693126,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,13.9152146474689,3.41902381494365,4.50191214764944,24.667949384398,4.61068896857864,2.24271040056923,1.06748995729705,3.94668077467456,0.933633106199299,8.21735099625097,6.70193802765181,1.96764655938411,10.37116664064,0.468642863667593,0.624320153660641,0,1.34503812496621,1.52664848236894,0.809364721840658,1.82586048712923,0.816616685019573,1.10550885580591,1.85986406116378,1.18800285728205,10.3852110296994,0,1.43723628363248,1.0100166837244,0.625592599359821,0,0.438977620880838,6.12975591598039,5.85928429735728,7.59995627172141,4.30535125653269,5.97960688691989,6.78182083710598,7.50227740211006,1.54578793857658,5.66809188100384,2.60563598864226,2.53164498361899,0.974370051611986,5.3011092591264,6.07529331039176,3.87950536365149,1.42003837006646,0.503760491138201,1.01736355386293,0,0,0,0,0,0.464775771478074,0.829288440122964,0,0,0,18.0107462694008,0,6.50115099244771,8.66255378003503,0.236613600079688,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,3.7041661019826,7.3504355692771,0,0.982827216677626,0,0,0,0.343135620597051,0,0,0,0,0,2.07986957055916,1.44331342025273,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,1.0267360014933,2.32689088364,0,7.607724773004,5.31876233169741,10.4007436911366,0,0,0,20.8747870740895,50.4638093014042,5.76268235746538,8.46914079163711,19.9019491295826,15.0470855857352,8.741741934728,0,7.69792032101839,0,0,0,9.10574450868014,19.5265290917994,0,1.59259437334337,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,6.62534055283355,13.0044335475516,4.88277042659524,39.3064928293225,17.664469890919,14.3509197680881,7.1456263145555,0.300946099727719,2.27407504055985,1.03473071292505,1.32845119707087,0.368738337083406,1.12948698808508,1.56640925970192,9.95115929051482,0,0,0,4.24378600024763,11.6504807657348,10.5836602665388,5.70647957983187,4.60385919864187,24.6980883101105,8.20090555236486,3.58195074346692,17.3722234835096,14.8418066444991,7.09364591492216,7.63515418846446,2.87445046048332,7.78881643775432,17.199136012074,0,0.200506470303285,0,7.23331023437022,17.6628432966516,8.39196255740314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0.9273691048295,0,0,0,0.650060246036521,16.068392984416,3.67348729510063,5.85384745035649,8.13569476048487,2.61889487720608,7.7342576305157,12.036385594881,2.72725207731523,20.2993041274561,0,0,0,0,0.464845549297286,17.3146790756852,0.6970372701606,5.85263802334569,0.532306030317022,0,0,0.143124886741991,3.34942532423701,0.949138274156178,14.4878947382107,0.511795582622668,5.13526785640705,2.86382923133343,2.35484592059769,9.35336779433237,22.5120364383565,11.663427832223,0,0,1.26377536871694,2.43816869544795,14.1353823986145,1.05650146756755,6.82499557039929,31.6748167576317,7.910568163417,1.10273068709225,3.98063385144732,1.31535265576129,1.73632660280006,5.9030527684197,0.405820753925408,1.54911749049875,1.40847801266121,2.86822704408103,11.2986397165089,0.35667105148125,0.709522128141196,10.3442741295855,31.2830148311907,0.379473173765715,1.39973888097993,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.95497793895076,3.26661148915902,3.99308912729002,0,0,0,0,0,2.39097585901284,0.828851746593443,0,0,0,0.933118762985422,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73624994933292,0,0,0,0,0,0,0,0,4.00141344219745,2.39278317278703,0,0,0,0.957003479195758,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,8.55442202907076,0,0,0,0,24.0773294189637,0,0,0,0,0,13.308978765353,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,0.290967049465258,0.0882561266915003,23.0500355596143,0,0,0,0,0,0.426905989478705,0,0,0.114536596165916,0,0,0,0,1.49494626680975,1.46443984837266,0,0.288950589901519,0,0,0,0.859530882839914,0,3.6306712165393,0.687481272035051,0,0.798716001995964,0.429226048136571,0,1.88113722962834,20.8973932454594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.891727998294968,0,0,0,0.714695326373367,0.662091970365432,0,2.71499800876856,0,4.24563568142232,0,0,13.2902656992629,0,0.293104467356165,1.32506888912221,0,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| |||
|short_description=p@chr2:189859488..189859525,- | |||
}} |
Latest revision as of 04:15, 29 July 2015
Short description: | p@chr2:189859488..189859525, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:189859488..189859525, - |
Coexpression cluster: | C1051_umbilical_tenocyte_Mesenchymal_mesenchymal_Olfactory_Adipocyte_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.07e-21 | 76 |
muscle cell | 5.32e-16 | 55 |
muscle precursor cell | 2.23e-15 | 58 |
myoblast | 2.23e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.23e-15 | 58 |
multi fate stem cell | 9.26e-15 | 427 |
somatic stem cell | 5.63e-14 | 433 |
electrically responsive cell | 3.41e-13 | 61 |
electrically active cell | 3.41e-13 | 61 |
stem cell | 5.65e-13 | 441 |
preadipocyte | 6.77e-11 | 12 |
smooth muscle cell | 6.36e-10 | 43 |
smooth muscle myoblast | 6.36e-10 | 43 |
extraembryonic cell | 6.21e-09 | 19 |
connective tissue cell | 6.45e-08 | 361 |
stromal cell | 5.94e-07 | 28 |