FFCP PHASE1:Mm9::chr10:19891807..19891818,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=20|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:19891807..19891818,+|id=chr10:19891807..19891818,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.87e-20!63;UBERON:0000955!1.96e-17!50;UBERON:0006238!1.96e-17!50;UBERON:0002346!2.89e-17!71;UBERON:0003075!2.89e-17!71;UBERON:0007284!2.89e-17!71;UBERON:0004121!2.77e-16!102;UBERON:0000924!2.77e-16!102;UBERON:0006601!2.77e-16!102;UBERON:0002616!1.12e-15!49;UBERON:0000073!8.32e-15!75;UBERON:0001016!8.32e-15!75;UBERON:0001049!1.58e-14!52;UBERON:0005068!1.58e-14!52;UBERON:0006241!1.58e-14!52;UBERON:0007135!1.58e-14!52;UBERON:0002298!4.18e-14!6;UBERON:0001017!8.55e-14!73;UBERON:0005743!8.55e-14!73;UBERON:0007811!1.18e-13!86;UBERON:0000153!4.13e-12!94;UBERON:0003056!2.28e-11!49;UBERON:0003076!2.64e-09!12;UBERON:0003057!2.64e-09!12;UBERON:0004733!5.42e-09!6;UBERON:0004732!5.42e-09!6;UBERON:0002028!5.42e-09!6;UBERON:0007277!5.42e-09!6;UBERON:0001896!4.72e-08!2;UBERON:0005290!4.72e-08!2;UBERON:0010096!4.72e-08!2;UBERON:0002950!4.92e-08!4;UBERON:0001891!4.92e-08!4;UBERON:0009616!4.92e-08!4;UBERON:0003080!1.11e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.38e-26,2;UBERON:0002298,2.38e-26,2;UBERON:0005290,2.38e-26,2;UBERON:0010096,2.38e-26,2;UBERON:0002259,8.69e-14,1;UBERON:0002314,8.69e-14,1;UBERON:0004061,8.69e-14,1;UBERON:0006777,8.69e-14,1;UBERON:0005882,8.69e-14,1;UBERON:0003076,3.61e-10,12;UBERON:0003057,3.61e-10,12;UBERON:0000955,8.37e-10,47;UBERON:0006238,8.37e-10,47;UBERON:0004733,1.78e-09,6;UBERON:0004732,1.78e-09,6;UBERON:0002028,1.78e-09,6;UBERON:0007277,1.78e-09,6;UBERON:0001049,6.63e-09,52;UBERON:0005068,6.63e-09,52;UBERON:0006241,6.63e-09,52;UBERON:0007135,6.63e-09,52;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0002346,2.95e-07,64;UBERON:0003075,2.95e-07,64;UBERON:0007284,2.95e-07,64;UBERON:0002616,3.85e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.766124028511126,0.768032666281217,0,0,0,0.558365998002762,0,0.916789486660861,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.64769703345305,0,0,0.173824320192276,0.767146371990992,1.45451631191692,2.75810147215188,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,3.6335622843583,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:19891807..19891818,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:19891807..19891818,+ | |||
|description=CAGE_peak_at_chr10:19891807..19891818,+ | |||
|id=chr10:19891807..19891818,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.87e-20!63;UBERON:0000955!1.96e-17!50;UBERON:0006238!1.96e-17!50;UBERON:0002346!2.89e-17!71;UBERON:0003075!2.89e-17!71;UBERON:0007284!2.89e-17!71;UBERON:0004121!2.77e-16!102;UBERON:0000924!2.77e-16!102;UBERON:0006601!2.77e-16!102;UBERON:0002616!1.12e-15!49;UBERON:0000073!8.32e-15!75;UBERON:0001016!8.32e-15!75;UBERON:0001049!1.58e-14!52;UBERON:0005068!1.58e-14!52;UBERON:0006241!1.58e-14!52;UBERON:0007135!1.58e-14!52;UBERON:0002298!4.18e-14!6;UBERON:0001017!8.55e-14!73;UBERON:0005743!8.55e-14!73;UBERON:0007811!1.18e-13!86;UBERON:0000153!4.13e-12!94;UBERON:0003056!2.28e-11!49;UBERON:0003076!2.64e-09!12;UBERON:0003057!2.64e-09!12;UBERON:0004733!5.42e-09!6;UBERON:0004732!5.42e-09!6;UBERON:0002028!5.42e-09!6;UBERON:0007277!5.42e-09!6;UBERON:0001896!4.72e-08!2;UBERON:0005290!4.72e-08!2;UBERON:0010096!4.72e-08!2;UBERON:0002950!4.92e-08!4;UBERON:0001891!4.92e-08!4;UBERON:0009616!4.92e-08!4;UBERON:0003080!1.11e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.38e-26,2;UBERON:0002298,2.38e-26,2;UBERON:0005290,2.38e-26,2;UBERON:0010096,2.38e-26,2;UBERON:0002259,8.69e-14,1;UBERON:0002314,8.69e-14,1;UBERON:0004061,8.69e-14,1;UBERON:0006777,8.69e-14,1;UBERON:0005882,8.69e-14,1;UBERON:0003076,3.61e-10,12;UBERON:0003057,3.61e-10,12;UBERON:0000955,8.37e-10,47;UBERON:0006238,8.37e-10,47;UBERON:0004733,1.78e-09,6;UBERON:0004732,1.78e-09,6;UBERON:0002028,1.78e-09,6;UBERON:0007277,1.78e-09,6;UBERON:0001049,6.63e-09,52;UBERON:0005068,6.63e-09,52;UBERON:0006241,6.63e-09,52;UBERON:0007135,6.63e-09,52;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0002346,2.95e-07,64;UBERON:0003075,2.95e-07,64;UBERON:0007284,2.95e-07,64;UBERON:0002616,3.85e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.766124028511126,0.768032666281217,0,0,0,0.558365998002762,0,0.916789486660861,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.64769703345305,0,0,0.173824320192276,0.767146371990992,1.45451631191692,2.75810147215188,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,3.6335622843583,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:19891807..19891818,+ | |||
}} |
Latest revision as of 05:20, 4 August 2015
Short description: | p@chr10:19891807..19891818, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:19891807..19891818, + |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.38e-26 | 2 |
brainstem | 2.38e-26 | 2 |
myelencephalon | 2.38e-26 | 2 |
future myelencephalon | 2.38e-26 | 2 |
corpora quadrigemina | 8.69e-14 | 1 |
midbrain tectum | 8.69e-14 | 1 |
neural tube mantle layer | 8.69e-14 | 1 |
tectal plate | 8.69e-14 | 1 |
neural tube alar plate | 8.69e-14 | 1 |
posterior neural tube | 3.61e-10 | 12 |
chordal neural plate | 3.61e-10 | 12 |
brain | 8.37e-10 | 47 |
future brain | 8.37e-10 | 47 |
segmental subdivision of hindbrain | 1.78e-09 | 6 |
segmental subdivision of nervous system | 1.78e-09 | 6 |
hindbrain | 1.78e-09 | 6 |
presumptive hindbrain | 1.78e-09 | 6 |
neural tube | 6.63e-09 | 52 |
neural rod | 6.63e-09 | 52 |
future spinal cord | 6.63e-09 | 52 |
neural keel | 6.63e-09 | 52 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
neurectoderm | 2.95e-07 | 64 |
neural plate | 2.95e-07 | 64 |
presumptive neural plate | 2.95e-07 | 64 |
regional part of brain | 3.85e-07 | 46 |