FFCP PHASE1:Hg19::chr2:224463424..224463445,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:224463424..224463445,- | |||
|coexpression_cluster_id=C708 | |||
|description=CAGE_peak_at_chr2:224463424..224463445,- | |||
|id=chr2:224463424..224463445,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.82e-09;1!CL:0000164;2.82e-09;1!CL:0000502;2.82e-09;1!CL:0000172;2.82e-09;1!CL:0000173;2.82e-09;1!CL:0002553;7.55e-09;1!CL:0002616;7.55e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.82e-09,1;CL:0000164,2.82e-09,1;CL:0000502,2.82e-09,1;CL:0000172,2.82e-09,1;CL:0000173,2.82e-09,1;CL:0002351,2.82e-09,1;CL:0002616,5.31e-09,1;CL:0002553,6.72e-09,1 | |||
|ontology_enrichment_development_v019=CL:0002351;2.82e-09;1 | |||
|ontology_enrichment_disease=DOID:171!7.57e-17!10;DOID:169!1.29e-12!6 | |||
|ontology_enrichment_disease_v019=DOID:171;7.56e-13;10!DOID:4430;2.82e-09;1!DOID:5662;7.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.17e-13,10;DOID:4430,2.82e-09,1;DOID:5662,1.16e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.31e-42!94;UBERON:0001016!5.31e-42!94;UBERON:0001049!5.24e-41!57;UBERON:0005068!5.24e-41!57;UBERON:0006241!5.24e-41!57;UBERON:0007135!5.24e-41!57;UBERON:0001017!9.48e-40!82;UBERON:0005743!2.53e-37!86;UBERON:0002346!1.46e-35!90;UBERON:0002616!1.91e-34!59;UBERON:0003075!1.30e-31!86;UBERON:0007284!1.30e-31!86;UBERON:0000955!4.50e-31!69;UBERON:0006238!4.50e-31!69;UBERON:0002780!5.23e-30!41;UBERON:0001890!5.23e-30!41;UBERON:0006240!5.23e-30!41;UBERON:0003080!4.07e-29!42;UBERON:0002020!9.43e-27!34;UBERON:0003528!9.43e-27!34;UBERON:0000924!1.85e-26!173;UBERON:0006601!1.85e-26!173;UBERON:0001869!2.02e-25!32;UBERON:0001893!1.36e-23!34;UBERON:0004121!1.73e-23!169;UBERON:0002791!2.38e-22!33;UBERON:0007023!4.56e-22!115;UBERON:0002619!1.15e-19!22;UBERON:0003056!3.63e-19!61;UBERON:0001950!4.09e-19!20;UBERON:0000033!4.83e-17!123;UBERON:0000956!6.93e-17!25;UBERON:0000203!6.93e-17!25;UBERON:0000153!9.56e-16!129;UBERON:0007811!9.56e-16!129;UBERON:0003076!8.37e-13!15;UBERON:0003057!8.37e-13!15;UBERON:0002308!6.86e-12!9;UBERON:0000125!6.86e-12!9;UBERON:0000025!2.68e-11!194;UBERON:0004733!1.56e-10!12;UBERON:0002028!1.56e-10!12;UBERON:0007277!1.56e-10!12;UBERON:0000013!1.80e-10!5;UBERON:0002410!1.80e-10!5;UBERON:0002298!8.21e-10!8;UBERON:0000369!1.28e-09!4;UBERON:0002435!1.28e-09!4;UBERON:0000204!1.28e-09!4;UBERON:0010082!1.28e-09!4;UBERON:0004732!1.34e-09!13;UBERON:0001871!1.43e-09!7;UBERON:0002420!1.33e-08!9;UBERON:0007245!1.33e-08!9;UBERON:0010009!1.33e-08!9;UBERON:0010011!1.33e-08!9;UBERON:0000454!1.33e-08!9;UBERON:0004111!2.01e-08!241;UBERON:0000200!2.12e-08!6;UBERON:0009663!5.14e-08!7;UBERON:0005383!5.34e-08!3;UBERON:0005382!5.34e-08!3;UBERON:0001894!5.95e-08!7;UBERON:0006222!5.95e-08!7;UBERON:0000988!8.73e-08!3;UBERON:0002771!2.00e-07!3;UBERON:0001896!2.82e-07!3;UBERON:0005290!2.82e-07!3;UBERON:0010096!2.82e-07!3;UBERON:0000477!3.33e-07!286;UBERON:0005174!5.15e-07!5;UBERON:0001137!5.15e-07!5;UBERON:0001872!7.45e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;9.90e-18;4!UBERON:0010133;9.90e-18;4!UBERON:0002148;1.87e-16;2!UBERON:0006331;1.87e-16;2!UBERON:0009662;1.87e-16;2!UBERON:0000007;2.46e-16;2!UBERON:0000125;3.39e-14;9!UBERON:0002308;3.39e-14;9!UBERON:0005383;1.24e-11;3!UBERON:0005382;1.24e-11;3!UBERON:0000988;2.78e-11;3!UBERON:0001894;2.26e-10;7!UBERON:0003528;2.82e-10;34!UBERON:0002020;2.82e-10;34!UBERON:0002780;5.62e-10;41!UBERON:0001890;5.62e-10;41!UBERON:0001874;2.21e-09;1!UBERON:0000073;2.42e-09;53!UBERON:0002616;2.42e-09;53!UBERON:0003112;4.19e-09;1!UBERON:0011158;4.19e-09;1!UBERON:0003128;4.19e-09;1!UBERON:0001703;4.19e-09;1!UBERON:0002241;4.19e-09;1!UBERON:0002346;4.92e-09;4!UBERON:0000923;4.92e-09;4!UBERON:0010316;4.92e-09;4!UBERON:0005291;4.92e-09;4!UBERON:0000369;6.11e-09;4!UBERON:0002435;6.11e-09;4!UBERON:0000204;6.11e-09;4!UBERON:0002791;8.81e-08;32!UBERON:0000955;1.40e-07;68!UBERON:0002050;2.17e-07;5!UBERON:0005423;2.17e-07;5!UBERON:0001869;2.55e-07;32!UBERON:0001893;7.94e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,6.62e-18,4;UBERON:0010133,6.62e-18,4;UBERON:0002148,1.37e-16,2;UBERON:0006331,1.37e-16,2;UBERON:0009662,1.37e-16,2;UBERON:0000007,1.73e-16,2;UBERON:0000073,2.33e-15,53;UBERON:0002616,2.33e-15,53;UBERON:0001049,1.88e-14,56;UBERON:0005068,1.88e-14,56;UBERON:0006241,1.88e-14,56;UBERON:0007135,1.88e-14,56;UBERON:0000125,3.01e-14,9;UBERON:0002308,3.01e-14,9;UBERON:0001016,8.54e-14,89;UBERON:0002780,1.84e-13,41;UBERON:0001890,1.84e-13,41;UBERON:0003080,1.84e-13,41;UBERON:0006240,1.84e-13,41;UBERON:0001017,2.48e-13,81;UBERON:0003528,4.95e-13,34;UBERON:0002020,4.95e-13,34;UBERON:0002346,1.08e-12,86;UBERON:0005383,1.27e-11,3;UBERON:0005382,1.27e-11,3;UBERON:0000955,2.01e-11,68;UBERON:0006238,2.01e-11,68;UBERON:0000988,2.26e-11,3;UBERON:0001894,1.80e-10,7;UBERON:0006222,1.80e-10,7;UBERON:0001874,2.22e-09,1;UBERON:0003075,2.41e-09,82;UBERON:0007284,2.41e-09,82;UBERON:0003112,3.88e-09,1;UBERON:0011158,3.88e-09,1;UBERON:0003128,3.88e-09,1;UBERON:0001703,3.88e-09,1;UBERON:0002241,3.88e-09,1;UBERON:0004761,3.88e-09,1;UBERON:0009617,3.88e-09,1;UBERON:0000369,6.23e-09,4;UBERON:0002435,6.23e-09,4;UBERON:0000204,6.23e-09,4;UBERON:0010082,6.23e-09,4;UBERON:0003056,1.09e-08,61;UBERON:0004121,2.10e-08,171;UBERON:0000924,2.10e-08,171;UBERON:0006601,2.10e-08,171;UBERON:0002791,6.31e-08,32;UBERON:0001869,6.31e-08,32;UBERON:0011216,1.35e-07,223;UBERON:0001893,1.92e-07,34;UBERON:0010371,5.31e-07,104 | |||
|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.76228387266739,0,3.09315525111078,0.335032530668698,2.55175500661265,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.703347082052564,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0.291604613383254,0,0.885741385813839,5.30624329951795,0,0.331737779793674,0.295547618953547,0.438770794307945,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,1.10939738410511,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,12.0116498503375,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0.169346664131569,0,0.544813624446302,0,0,0,0,0,0.303747783290123,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,1.68067843270016,5.42153667145029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29470915235301,0.625954653532499,0.573409195690071,0.998361463831671,0.496771223531068,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450772826991655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0.255788742607303,0.323474434190045,1.10086159299127,0.436838552768056,0,9.56587140457573,0.867550349813015,0.558644917973244,0,0,1.60114149657094,0,0,0.321146125482298,0,0.478901577171454,1.23069818544453,0,0.138314504928436,2.74508597574147,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.620060389503552,0.317079050969534,1.09394961803644,0,0,22.1597767893122,0,1.60710550763486,0,3.03482802118316,1.82129753081038,0,0,1.02892805662451,0.611727596791485,0.131545547125698,0,0,0,6.75597036638808,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18845852677505,0,0,0,0.452888530700021,0,0.218559560503957,29.6299896707759,0,4.94920748913415,0.785233868459781,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:224463424..224463445,- | |||
}} |
Latest revision as of 07:07, 29 July 2015
Short description: | p@chr2:224463424..224463445, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:224463424..224463445, - |
Coexpression cluster: | C708_smallcell_peripheral_gastrointestinal_neuroectodermal_Neurons_pituitary_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.82e-09 | 1 |
enteroendocrine cell | 2.82e-09 | 1 |
type D enteroendocrine cell | 2.82e-09 | 1 |
somatostatin secreting cell | 2.82e-09 | 1 |
pancreatic D cell | 2.82e-09 | 1 |
progenitor cell of endocrine pancreas | 2.82e-09 | 1 |
perirenal adipocyte cell | 5.31e-09 | 1 |
lung fibroblast | 6.72e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.17e-13 | 10 |
somatostatinoma | 2.82e-09 | 1 |
pleomorphic carcinoma | 1.16e-08 | 1 |