FFCP PHASE1:Mm9::chr11:106021801..106021813,-: Difference between revisions
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{{FFCP|EntrezGene=67803|HGNC=|UniProt=|association_with_transcript=229bp_to_uc007lye.1_5end|description=CAGE_peak_13_at_Limd2_5end|id=chr11:106021801..106021813,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000624,6.13e-11,8;CL:0000791,9.63e-10,9;CL:0000789,9.63e-10,9;CL:0002420,9.63e-10,9;CL:0002419,9.63e-10,9;CL:0000790,9.63e-10,9;CL:0000084,5.34e-08,11;CL:0000827,5.34e-08,11;CL:0000988,1.86e-07,32;CL:0002032,1.86e-07,32;CL:0000037,1.86e-07,32;CL:0000837,1.86e-07,32;CL:0000838,2.42e-07,12;CL:0002031,2.80e-07,25;CL:0000542,8.71e-07,13;CL:0000051,8.71e-07,13;CL:0000815,9.48e-07,1;CL:0000792,9.48e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.30e-09!45;UBERON:0003061!4.30e-09!45;UBERON:0000153!5.16e-08!94;UBERON:0002193!7.85e-08!48|ontology_enrichment_uberon_v019_2=UBERON:0002102,5.86e-07,7;UBERON:0004710,5.86e-07,7;UBERON:0005419,5.86e-07,7;UBERON:0005417,5.86e-07,7;UBERON:0005729,5.86e-07,7|phase1_expression=0,0,0,0,0,0,0,1.93684985162364,0.281577444303333,0,0.513653904676515,0,3.0816131387617,1.13646523144697,0,0,0,1.41957974411207,0.411343300817216,1.69755860719212,0.255129870453209,0.397163804803541,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,1.67412652294763,0,0.523523743973798,1.17646297606203,2.73218193983378,0.971020706062307,0,0,0.183546752161682,0.782391344348039,0,0.219686182734472,0.194429899074283,0,0,0.671130424230945,1.45072428402269,0.336093799142464,0,0,0,0.606949382578793,0,0,0,0,0.899899717281399,1.97773272513395,0.7104801149461,0.299600110518405,0.384218305321555,0.103689612308478,0.405017814995072,0.841299845405528,0,0,0.367472397644862,0.383381884072945,0.919218786610021,0,0,0,0.395658863190582,0.640413505216868,1.04182674111352,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.635351135365324,0,0,0.125654352112864,0.521472960576829,0,0,0.162241263067758,0,0.622034853050465,0,0,0.780722657776222,0.919608417733892,0.180062129805349,0.150704817835715,0.476255494059295,0.2562274405697,0.281105173679186,0,1.29340795759705,1.13463648100692,1.05570674498369,0.876782929710299,0.556094498451196,0,0.205782136407943,0,1.40442637462647,0.51469581422943,0.284163499395593,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,0,0.512612642393558,0.412773735926445,0,0.188368457004691,0.136694227721025,0,0.509935289981566,0.559805809294632,0.138199973804424,0,0.790839983952838,0,0,0,0,0,0.0826534557253359,0,0,0,2.81846469342095,0.299033092087958,0.165458490457098,0.194451188344048,0.516639293910924,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0.966336483304024,1.44015003128933,0,0.608175645870493,0.410843828659309,0.25984164595559,0.716106782669926,0.39736270956253,0.600977247599844,0.738447635872886,0.403865799792591,0.381034033274999,0.504130925684203,0.487289403698762,0.481059208201647,0.116876902181569,0,0.221985953374065,0.269141569828427,0.167884616364078,0,0,0,0,0,0,0,0,0,0.685082519770642,0.755393897389701,0,0,0,0,0.518936737920883,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421|short_description=p13@Limd2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67803 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=229bp_to_uc007lye.1_5end | |||
|cluster_id=chr11:106021801..106021813,- | |||
|description=CAGE_peak_13_at_Limd2_5end | |||
|id=chr11:106021801..106021813,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,6.13e-11,8;CL:0000791,9.63e-10,9;CL:0000789,9.63e-10,9;CL:0002420,9.63e-10,9;CL:0002419,9.63e-10,9;CL:0000790,9.63e-10,9;CL:0000084,5.34e-08,11;CL:0000827,5.34e-08,11;CL:0000988,1.86e-07,32;CL:0002032,1.86e-07,32;CL:0000037,1.86e-07,32;CL:0000837,1.86e-07,32;CL:0000838,2.42e-07,12;CL:0002031,2.80e-07,25;CL:0000542,8.71e-07,13;CL:0000051,8.71e-07,13;CL:0000815,9.48e-07,1;CL:0000792,9.48e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.30e-09!45;UBERON:0003061!4.30e-09!45;UBERON:0000153!5.16e-08!94;UBERON:0002193!7.85e-08!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,5.86e-07,7;UBERON:0004710,5.86e-07,7;UBERON:0005419,5.86e-07,7;UBERON:0005417,5.86e-07,7;UBERON:0005729,5.86e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,1.93684985162364,0.281577444303333,0,0.513653904676515,0,3.0816131387617,1.13646523144697,0,0,0,1.41957974411207,0.411343300817216,1.69755860719212,0.255129870453209,0.397163804803541,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,1.67412652294763,0,0.523523743973798,1.17646297606203,2.73218193983378,0.971020706062307,0,0,0.183546752161682,0.782391344348039,0,0.219686182734472,0.194429899074283,0,0,0.671130424230945,1.45072428402269,0.336093799142464,0,0,0,0.606949382578793,0,0,0,0,0.899899717281399,1.97773272513395,0.7104801149461,0.299600110518405,0.384218305321555,0.103689612308478,0.405017814995072,0.841299845405528,0,0,0.367472397644862,0.383381884072945,0.919218786610021,0,0,0,0.395658863190582,0.640413505216868,1.04182674111352,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.635351135365324,0,0,0.125654352112864,0.521472960576829,0,0,0.162241263067758,0,0.622034853050465,0,0,0.780722657776222,0.919608417733892,0.180062129805349,0.150704817835715,0.476255494059295,0.2562274405697,0.281105173679186,0,1.29340795759705,1.13463648100692,1.05570674498369,0.876782929710299,0.556094498451196,0,0.205782136407943,0,1.40442637462647,0.51469581422943,0.284163499395593,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,0,0.512612642393558,0.412773735926445,0,0.188368457004691,0.136694227721025,0,0.509935289981566,0.559805809294632,0.138199973804424,0,0.790839983952838,0,0,0,0,0,0.0826534557253359,0,0,0,2.81846469342095,0.299033092087958,0.165458490457098,0.194451188344048,0.516639293910924,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0.966336483304024,1.44015003128933,0,0.608175645870493,0.410843828659309,0.25984164595559,0.716106782669926,0.39736270956253,0.600977247599844,0.738447635872886,0.403865799792591,0.381034033274999,0.504130925684203,0.487289403698762,0.481059208201647,0.116876902181569,0,0.221985953374065,0.269141569828427,0.167884616364078,0,0,0,0,0,0,0,0,0,0.685082519770642,0.755393897389701,0,0,0,0,0.518936737920883,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421 | |||
|short_description=p13@Limd2 | |||
}} |
Latest revision as of 20:05, 26 September 2015
Short description: | p13@Limd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Limd2_5end |
Coexpression cluster: | NA |
Association with transcript: | 229bp_to_uc007lye.1_5end |
EntrezGene: | Limd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 6.13e-11 | 8 |
mature alpha-beta T cell | 9.63e-10 | 9 |
alpha-beta T cell | 9.63e-10 | 9 |
immature T cell | 9.63e-10 | 9 |
mature T cell | 9.63e-10 | 9 |
immature alpha-beta T cell | 9.63e-10 | 9 |
T cell | 5.34e-08 | 11 |
pro-T cell | 5.34e-08 | 11 |
hematopoietic cell | 1.86e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.86e-07 | 32 |
hematopoietic stem cell | 1.86e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.86e-07 | 32 |
lymphoid lineage restricted progenitor cell | 2.42e-07 | 12 |
hematopoietic lineage restricted progenitor cell | 2.80e-07 | 25 |
lymphocyte | 8.71e-07 | 13 |
common lymphoid progenitor | 8.71e-07 | 13 |
regulatory T cell | 9.48e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
forelimb | 5.86e-07 | 7 |
pectoral appendage | 5.86e-07 | 7 |
pectoral appendage bud | 5.86e-07 | 7 |
forelimb bud | 5.86e-07 | 7 |
forelimb/pectoral fin field | 5.86e-07 | 7 |