FFCP PHASE1:Hg19::chr2:56150883..56150896,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2202 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3218 | |||
|TSSclassifier=strong | |||
|UniProt=B4DW75 | |||
|association_with_transcript=14bp_to_ENST00000424836,ENST00000452161_5end | |||
|cluster_id=chr2:56150883..56150896,- | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_2_at_EFEMP1_5end | |||
|id=chr2:56150883..56150896,- | |||
|ontology_enrichment_celltype=CL:0000222!3.46e-28!119;CL:0000213!1.20e-17!57;CL:0000215!1.20e-17!57;CL:0002139!1.97e-16!24;CL:0000055!4.60e-16!180;CL:0002078!1.14e-13!44;CL:0000220!1.82e-13!246;CL:0002321!5.38e-13!248;CL:0000115!9.39e-13!35;CL:0000071!1.71e-12!18;CL:0002546!1.71e-12!18;CL:0000187!1.07e-11!54;CL:0000680!2.80e-11!57;CL:0000056!2.80e-11!57;CL:0000355!2.80e-11!57;CL:0000076!5.31e-11!62;CL:0000359!6.28e-11!32;CL:0000183!1.60e-10!59;CL:0000057!1.75e-10!75;CL:0000192!1.84e-10!42;CL:0000514!1.84e-10!42;CL:0000393!3.27e-09!60;CL:0000211!3.27e-09!60;CL:0002494!3.80e-08!16;CL:1000413!4.68e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.99e-17;24!CL:0000071;7.14e-13;18!CL:0000115;1.47e-11;36!CL:0000213;9.35e-11;58!CL:0000215;9.35e-11;58!CL:0000359;1.48e-10;32!CL:0002078;4.91e-10;45!CL:0002494;2.36e-08;16!CL:0000192;3.55e-08;43!CL:1000413;2.99e-07;9!CL:0000187;9.01e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.81e-29,121;CL:0000213,8.59e-19,58;CL:0000215,8.59e-19,58;CL:0002139,6.02e-17,24;CL:0002078,2.91e-14,45;CL:0000115,1.19e-13,36;CL:0002321,3.58e-13,250;CL:0000071,7.16e-13,18;CL:0002546,7.16e-13,18;CL:0000187,4.26e-12,55;CL:0000680,1.14e-11,58;CL:0000056,1.14e-11,58;CL:0000355,1.14e-11,58;CL:0000076,1.61e-11,63;CL:0000359,2.97e-11,32;CL:0000192,8.36e-11,43;CL:0000514,8.36e-11,43;CL:0000057,1.89e-09,76;CL:0000393,3.10e-09,61;CL:0000211,3.10e-09,61;CL:0002494,2.24e-08,16;CL:1000413,3.01e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;7.14e-13;18!CL:0000222;1.66e-08;121!CL:0000514;3.55e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.66e-31!84;UBERON:0000477!6.41e-31!286;UBERON:0002049!1.84e-30!79;UBERON:0007798!1.84e-30!79;UBERON:0000055!4.07e-28!69;UBERON:0004111!3.13e-27!241;UBERON:0001981!1.43e-25!60;UBERON:0007500!1.43e-25!60;UBERON:0004537!1.43e-25!60;UBERON:0006965!1.43e-25!60;UBERON:0000483!3.23e-25!309;UBERON:0000119!8.93e-25!312;UBERON:0004535!3.50e-24!110;UBERON:0001009!4.48e-24!113;UBERON:0003914!1.47e-23!118;UBERON:0000025!6.53e-23!194;UBERON:0000475!1.71e-18!365;UBERON:0001637!1.99e-18!42;UBERON:0003509!1.99e-18!42;UBERON:0004572!1.99e-18!42;UBERON:0000468!6.64e-17!659;UBERON:0000490!2.16e-16!138;UBERON:0004573!1.47e-14!33;UBERON:0004571!1.47e-14!33;UBERON:0000467!1.93e-14!625;UBERON:0000480!2.53e-14!626;UBERON:0000481!1.87e-13!347;UBERON:0001986!1.71e-12!18;UBERON:0004638!1.71e-12!18;UBERON:0004852!1.71e-12!18;UBERON:0006914!2.44e-12!25;UBERON:0000487!2.68e-11!22;UBERON:0002385!1.18e-10!63;UBERON:0001015!1.18e-10!63;UBERON:0000383!1.18e-10!63;UBERON:0001134!1.69e-10!61;UBERON:0002036!1.69e-10!61;UBERON:0003082!1.69e-10!61;UBERON:0000947!3.31e-10!21;UBERON:0010191!3.31e-10!21;UBERON:0000948!6.99e-10!24;UBERON:0005498!6.99e-10!24;UBERON:0004140!6.99e-10!24;UBERON:0009881!6.99e-10!24;UBERON:0004141!6.99e-10!24;UBERON:0003084!6.99e-10!24;UBERON:0007005!6.99e-10!24;UBERON:0004139!6.99e-10!24;UBERON:0004291!6.99e-10!24;UBERON:0007100!1.86e-09!27;UBERON:0000486!2.32e-09!82;UBERON:0002100!9.45e-09!216;UBERON:0005256!1.70e-08!143;UBERON:0004290!1.72e-08!70;UBERON:0000914!4.17e-08!83;UBERON:0002329!4.17e-08!83;UBERON:0003077!4.17e-08!83;UBERON:0003059!4.17e-08!83;UBERON:0007282!4.17e-08!83;UBERON:0009618!4.17e-08!83;UBERON:0007285!4.17e-08!83;UBERON:0000064!8.96e-08!219;UBERON:0003915!4.68e-07!9;UBERON:0004700!4.68e-07!9;UBERON:0001917!4.68e-07!9;UBERON:0003103!5.65e-07!69;UBERON:0002050!6.47e-07!605;UBERON:0005423!6.47e-07!605;UBERON:0000923!6.74e-07!604;UBERON:0005291!6.74e-07!604;UBERON:0006598!6.74e-07!604;UBERON:0002532!6.74e-07!604;UBERON:0000922!9.34e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.13e-14;42!UBERON:0003509;1.13e-14;42!UBERON:0004572;1.13e-14;42!UBERON:0007500;3.07e-14;56!UBERON:0001981;3.07e-14;56!UBERON:0004537;3.07e-14;56!UBERON:0000055;5.58e-14;65!UBERON:0004573;6.58e-14;33!UBERON:0004571;6.58e-14;33!UBERON:0004638;7.14e-13;18!UBERON:0001986;7.14e-13;18!UBERON:0004852;7.14e-13;18!UBERON:0006914;7.59e-13;25!UBERON:0002049;9.94e-13;75!UBERON:0007798;9.94e-13;75!UBERON:0000487;9.56e-12;22!UBERON:0000947;1.63e-10;21!UBERON:0010191;1.63e-10;21!UBERON:0000948;3.55e-09;22!UBERON:0000490;3.89e-09;33!UBERON:0007100;9.62e-09;25!UBERON:0003914;1.81e-08;74!UBERON:0004535;5.43e-08;109!UBERON:0001009;6.35e-08;112!UBERON:0003915;2.99e-07;9!UBERON:0004700;2.99e-07;9!UBERON:0001917;2.99e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,9.25e-32,83;UBERON:0002049,5.98e-31,78;UBERON:0007798,5.98e-31,78;UBERON:0000055,3.00e-28,68;UBERON:0007500,6.70e-26,59;UBERON:0001981,6.70e-26,59;UBERON:0004537,6.70e-26,59;UBERON:0006965,6.70e-26,59;UBERON:0004535,1.65e-25,109;UBERON:0001009,2.19e-25,112;UBERON:0004111,3.55e-25,240;UBERON:0003914,3.10e-23,117;UBERON:0000483,9.55e-23,306;UBERON:0000119,5.17e-22,309;UBERON:0000025,9.45e-22,192;UBERON:0001637,5.17e-19,42;UBERON:0003509,5.17e-19,42;UBERON:0004572,5.17e-19,42;UBERON:0004573,5.20e-15,33;UBERON:0004571,5.20e-15,33;UBERON:0000490,2.97e-14,148;UBERON:0004638,7.16e-13,18;UBERON:0001986,7.16e-13,18;UBERON:0004852,7.16e-13,18;UBERON:0006914,8.33e-13,25;UBERON:0000487,9.94e-12,22;UBERON:0002385,7.48e-11,64;UBERON:0001015,7.48e-11,64;UBERON:0000383,7.48e-11,64;UBERON:0001134,1.09e-10,62;UBERON:0002036,1.09e-10,62;UBERON:0003082,1.09e-10,62;UBERON:0000947,1.66e-10,21;UBERON:0010191,1.66e-10,21;UBERON:0000948,3.59e-10,24;UBERON:0005498,3.59e-10,24;UBERON:0004140,3.59e-10,24;UBERON:0009881,3.59e-10,24;UBERON:0004141,3.59e-10,24;UBERON:0003084,3.59e-10,24;UBERON:0007005,3.59e-10,24;UBERON:0004139,3.59e-10,24;UBERON:0004291,3.59e-10,24;UBERON:0007100,9.91e-10,27;UBERON:0007503,7.13e-09,78;UBERON:0000486,8.68e-09,83;UBERON:0010314,9.30e-09,132;UBERON:0005256,1.03e-08,122;UBERON:0003077,5.26e-08,72;UBERON:0007285,5.26e-08,72;UBERON:0007524,6.61e-08,73;UBERON:0002329,7.10e-08,71;UBERON:0003059,7.10e-08,71;UBERON:0007282,7.10e-08,71;UBERON:0004290,7.10e-08,71;UBERON:0009618,7.10e-08,71;UBERON:0002050,1.08e-07,564;UBERON:0000923,1.47e-07,560;UBERON:0010316,1.47e-07,560;UBERON:0005291,1.47e-07,560;UBERON:0006598,1.47e-07,560;UBERON:0010317,1.47e-07,560;UBERON:0002532,1.47e-07,560;UBERON:0003104,1.99e-07,160;UBERON:0009142,1.99e-07,160;UBERON:0003915,3.01e-07,9;UBERON:0004700,3.01e-07,9;UBERON:0001917,3.01e-07,9;UBERON:0002100,3.40e-07,199 | |||
|phase1_expression=143.889276382281,77.0761886007539,132.638094254309,87.0637695672235,123.808223156359,272.169619519315,27.8629865985142,6.94891860769514,41.5285148837743,3.19454117451962,5.58240934377942,6.99012390816551,5.53910654279752,17.5748221203266,45.7328378504524,34.2885824690405,30.1347264011988,35.7851944289813,28.7880351286399,3.93987385845721,6.9360235023046,6.58254915103984,4.86601178122796,3.01123735160345,5.64941878176613,0.382067028739756,0.246301768349837,0.236132343941038,0,0,0,16.5495820406207,4.2168828628955,14.0506523863379,0,0,0,2.21598163412751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,792.372315520376,72.4356928479927,311.601063212683,575.772569748614,576.538597231273,626.02665494868,53.2841584524236,124.091891927172,18.150684895501,23.7250455284943,38.8229752763617,11.1987109550544,2.5500670180478,4.44941331341315,0,0,0.132957960518865,0,0,0,192.203247923604,188.391376328241,212.449986983848,326.747990432078,244.568171310375,175.525310757763,227.595518558587,267.461345740255,283.545711361308,573.041689053115,347.641700665194,390.779862339315,334.365018840992,345.970958605462,288.410533445906,380.059643577044,259.780484128478,291.551122971321,157.91613658986,112.962613488607,124.393984128747,0,0,7.41359888642308,130.703623295869,272.888752637169,165.643885197337,906.403721566251,104.981841130714,179.977509645681,55.5094777794466,87.5669796880918,281.334776001389,110.193329753005,156.269579376467,72.6515652695671,34.5705554687999,2.34321431833797,1.24864030732128,31.3759501849447,0.298897361103602,0.352303495931295,0.323745888736263,0.280901613404497,0.408308342509787,0.368502951935304,2.6864703105699,0,3.4617370098998,3.64064544775211,3.59309070908119,0.168336113954066,0.375355559615893,0.277064115484183,0.877955241761676,8.27517048657353,12.7702350070607,169.240817274751,229.439344046054,337.420674333337,199.004055188829,90.6275110174895,140.769754939708,25.2487729244717,14.8893485065272,36.6244640963548,94.3190209960403,150.198095675248,187.505643534364,262.836488387388,179.634853813407,70.7279729558035,14.7517715310124,4.25173876959253,4.63668405004419,6.30970109855808,0,0.265059536642971,0.464775771478074,0.725627385107593,0.504641701751257,0,3.12899064659632,0.643240938192885,0,11.1448302727675,6.49691533502627,6.50687400219141,5.22612539242115,4.57920956778616,5.29411069115491,5.22910665821775,4.74541238222193,7.01122802432855,5.49420102350969,5.38646019724947,2.95262181849859,21.0362660705169,32.1027728838492,22.0513067078313,0,0,2.95394953340702,0,0,32.2547483361228,7.02401826615204,1.1240175325762,1.3068766413512,8.61072539974325,3.25808305310325,0,27.4229549848019,7.41954591840492,119.404642037831,321.215346268389,315.756119577249,455.278186297394,2.37061319387782,0,0,0,0,2.81201501960331,20.1578553838631,1.98485136139341,17.6430289724611,7.84711633987697,10.3513323374607,0,0,0.207328115540772,0,0,0,0,0,10.2643467613623,0.102827492703324,0,0,0.224262168690721,3.48768055066624,0.4400297149257,14.7369755963867,10.7296933755565,1.690605505112,0.26593811658487,0,1.28603687131071,0,1.5985330740966,120.244492666502,15.1934049509604,18.9345277459577,2.60588947434988,113.370031648872,19.0068449504023,3.91871190177462,4.35766729300147,18.3950303774985,0,0,0,4.55287225434007,10.3375742250703,1.42636905040718,4.92256442669769,3.28762116080613,4.29746311775749,0,0,0,0,0.254094624222463,1.30139853857622,0,4.18790663335872,0,0,0,0,53.7388733729833,28.0095491793419,19.8023467300807,58.0238703670952,12.4900292158013,38.1639844382122,61.3821014561817,53.568405751534,47.7555758517568,19.6598835455759,17.2698655619213,7.74350507875153,21.1996019302122,0.979005787313703,0,0,0,0,7.57818928615649,8.32177197552485,16.6314661331324,169.953848355862,226.663334546468,127.419682872615,112.634312195761,130.997055761076,80.1052527295165,189.975125049588,0.308419387605311,9.05564799096948,1.06765302817952,1.55776328755086,1.04589340613963,0,18.0455823272956,5.80110230296147,23.7665907700736,0.728364672026868,5.76947425821466,0.902399225814824,2.6185214615501,0.784349769176855,0,1.68882606228601,60.2786935575752,30.1065858339433,256.939940161546,169.649977959318,1.89662506280697,1.00337954770971,2.54876273045038,3.3243040357149,0.671624264166535,0,0,8.46285412884084,23.6170544903788,68.9802196688322,30.0879754011349,0,0,8.03971753194641,7.80072295243825,324.581538285202,2.03008508413456,10.7834031980251,14.7363527737084,1.7918754422989,33.1928556642966,17.8370533514501,4.17610474338894,17.8064071293475,40.1642344327177,29.2128902394961,33.434530673581,12.4424070452326,9.29691098594571,288.997734390528,13.2437081330514,90.253838991594,35.6645040312405,16.5287268494264,44.4778125849408,83.5849338573229,5.95453390975468,33.8525984449037,236.572070659467,3.58256907835867,38.0865699350189,75.414169758447,19.6237160049807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| |||
|short_description=p2@EFEMP1 | |||
}} |
Latest revision as of 18:21, 17 September 2015
Short description: | p2@EFEMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EFEMP1_5end |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | 14bp_to_ENST00000424836, ENST00000452161_5end |
EntrezGene: | EFEMP1 |
HGNC: | 3218 |
UniProt: | B4DW75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.81e-29 | 121 |
lining cell | 8.59e-19 | 58 |
barrier cell | 8.59e-19 | 58 |
endothelial cell of vascular tree | 6.02e-17 | 24 |
meso-epithelial cell | 2.91e-14 | 45 |
endothelial cell | 1.19e-13 | 36 |
embryonic cell | 3.58e-13 | 250 |
blood vessel endothelial cell | 7.16e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.16e-13 | 18 |
muscle cell | 4.26e-12 | 55 |
muscle precursor cell | 1.14e-11 | 58 |
myoblast | 1.14e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.14e-11 | 58 |
squamous epithelial cell | 1.61e-11 | 63 |
vascular associated smooth muscle cell | 2.97e-11 | 32 |
smooth muscle cell | 8.36e-11 | 43 |
smooth muscle myoblast | 8.36e-11 | 43 |
fibroblast | 1.89e-09 | 76 |
electrically responsive cell | 3.10e-09 | 61 |
electrically active cell | 3.10e-09 | 61 |
cardiocyte | 2.24e-08 | 16 |
endothelial cell of artery | 3.01e-07 | 9 |