FFCP PHASE1:Hg19::chr2:74669504..74669520,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6242 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10466 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENST00000484453_5end | |||
|cluster_id=chr2:74669504..74669520,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_9_at_RTKN_5end | |||
|id=chr2:74669504..74669520,- | |||
|ontology_enrichment_celltype=CL:0000066!4.18e-12!254;CL:0000223!1.16e-09!59;CL:1000497!9.59e-09!18;CL:0002518!9.59e-09!18;CL:1000449!1.68e-08!16;CL:1000507!8.97e-08!12;CL:1000494!8.97e-08!12;CL:0002322!4.13e-07!5;CL:0002681!7.86e-07!13;CL:0002584!7.86e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.85e-30;12!CL:1000449;8.52e-11;15!CL:0002563;9.41e-11;4!CL:1000497;1.50e-09;17!CL:0002518;1.50e-09;17!CL:1000507;2.14e-09;10!CL:1000494;2.14e-09;10!CL:0002681;5.10e-08;12!CL:0002584;5.10e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.64e-30,12;CL:0000223,6.90e-13,58;CL:1000449,8.31e-11,15;CL:0002563,8.96e-11,4;CL:1000497,1.47e-09,17;CL:0002518,1.47e-09,17;CL:1000507,2.11e-09,10;CL:1000494,2.11e-09,10;CL:0002681,4.81e-08,12;CL:0002584,4.81e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.85e-15;31!UBERON:0004161;2.70e-15;11!UBERON:0009497;5.62e-13;13!CL:0000223;5.55e-09;58 | |||
|ontology_enrichment_disease=DOID:305!7.07e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!6.27e-14!55;UBERON:0005173!6.27e-14!55;UBERON:0006554!2.00e-12!44;UBERON:0001008!5.35e-12!45;UBERON:0002417!9.52e-12!61;UBERON:0000916!9.52e-12!61;UBERON:0005177!3.94e-11!107;UBERON:0003064!5.37e-09!37;UBERON:0000489!9.89e-09!32;UBERON:0002113!1.58e-08!27;UBERON:0003918!1.58e-08!27;UBERON:0005095!1.58e-08!27;UBERON:0007687!1.58e-08!27;UBERON:0004211!1.68e-08!16;UBERON:0001285!1.68e-08!16;UBERON:0007684!1.68e-08!16;UBERON:0003220!1.68e-08!16;UBERON:0004208!1.68e-08!16;UBERON:0003929!4.75e-08!54;UBERON:0001049!5.30e-08!57;UBERON:0005068!5.30e-08!57;UBERON:0006241!5.30e-08!57;UBERON:0007135!5.30e-08!57;UBERON:0009569!6.23e-08!113;UBERON:0006555!7.50e-08!17;UBERON:0005103!7.50e-08!17;UBERON:0000083!7.50e-08!17;UBERON:0009201!7.50e-08!17;UBERON:0004819!7.50e-08!17;UBERON:0006553!7.50e-08!17;UBERON:0003074!7.50e-08!17;UBERON:0003060!7.50e-08!17;UBERON:0009773!8.97e-08!12;UBERON:0001231!8.97e-08!12;UBERON:0004810!8.97e-08!12;UBERON:0005911!8.99e-08!82;UBERON:0000483!1.14e-07!309;UBERON:0000119!1.98e-07!312;UBERON:0000080!2.82e-07!18;UBERON:0002120!2.82e-07!18;UBERON:0004875!2.82e-07!18;UBERON:0005721!2.82e-07!18;UBERON:0005754!2.82e-07!18;UBERON:0007297!2.82e-07!18;UBERON:0000481!5.15e-07!347;UBERON:0002780!5.44e-07!41;UBERON:0001890!5.44e-07!41;UBERON:0006240!5.44e-07!41;UBERON:0003887!6.18e-07!21;UBERON:0004111!7.37e-07!241;UBERON:0001225!7.86e-07!13;UBERON:0008987!7.86e-07!13;UBERON:0001851!8.95e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.07e-25;19!UBERON:0006925;1.07e-25;19!UBERON:0005172;4.91e-21;52!UBERON:0005173;4.91e-21;52!UBERON:0002423;2.21e-19;25!UBERON:0002417;6.43e-18;58!UBERON:0000916;6.43e-18;58!UBERON:0002368;1.27e-16;33!UBERON:0002365;3.30e-15;31!UBERON:0002330;3.30e-15;31!UBERON:0002113;1.84e-14;24!UBERON:0011143;1.84e-14;24!UBERON:0000949;3.44e-13;43!UBERON:0000489;6.65e-12;29!UBERON:0006554;1.71e-11;30!UBERON:0001008;1.71e-11;30!UBERON:0001851;8.52e-11;15!UBERON:0006555;8.52e-11;15!UBERON:0004819;8.52e-11;15!UBERON:0001285;8.52e-11;15!UBERON:0007684;8.52e-11;15!UBERON:0001242;9.41e-11;4!UBERON:0001262;9.41e-11;4!UBERON:0004786;9.41e-11;4!UBERON:0004808;9.41e-11;4!UBERON:0001277;9.41e-11;4!UBERON:0004211;2.14e-09;10!UBERON:0009773;2.14e-09;10!UBERON:0001231;2.14e-09;10!UBERON:0004810;2.14e-09;10!UBERON:0002530;4.49e-09;57!UBERON:0001225;5.10e-08;12!UBERON:0008987;5.10e-08;12!UBERON:0001007;8.15e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.02e-34,54;UBERON:0005173,3.02e-34,54;UBERON:0002417,1.28e-30,60;UBERON:0000916,1.28e-30,60;UBERON:0002107,1.01e-25,19;UBERON:0006925,1.01e-25,19;UBERON:0008836,1.01e-25,19;UBERON:0008835,3.94e-22,22;UBERON:0003894,3.94e-22,22;UBERON:0009854,3.84e-21,23;UBERON:0007499,2.12e-19,25;UBERON:0009497,2.12e-19,25;UBERON:0000015,2.12e-19,25;UBERON:0002423,2.12e-19,25;UBERON:0006235,2.12e-19,25;UBERON:0004161,2.12e-19,25;UBERON:0009856,1.25e-18,26;UBERON:0002368,1.05e-17,35;UBERON:0005177,2.45e-17,101;UBERON:0003929,2.84e-17,54;UBERON:0002365,1.62e-15,31;UBERON:0002330,1.62e-15,31;UBERON:0009569,2.01e-15,112;UBERON:0003104,1.37e-13,160;UBERON:0009142,1.37e-13,160;UBERON:0000949,1.46e-13,45;UBERON:0002113,2.84e-13,26;UBERON:0003918,2.84e-13,26;UBERON:0011143,2.84e-13,26;UBERON:0005095,2.84e-13,26;UBERON:0007687,2.84e-13,26;UBERON:0002530,9.74e-13,59;UBERON:0000489,4.54e-11,31;UBERON:0005911,6.89e-11,82;UBERON:0001851,7.30e-11,15;UBERON:0004211,8.31e-11,15;UBERON:0009773,8.31e-11,15;UBERON:0001231,8.31e-11,15;UBERON:0001285,8.31e-11,15;UBERON:0007684,8.31e-11,15;UBERON:0004208,8.31e-11,15;UBERON:0001242,8.96e-11,4;UBERON:0001262,8.96e-11,4;UBERON:0004786,8.96e-11,4;UBERON:0004808,8.96e-11,4;UBERON:0001277,8.96e-11,4;UBERON:0006555,3.82e-10,16;UBERON:0004819,3.82e-10,16;UBERON:0006554,1.36e-09,47;UBERON:0004810,2.11e-09,10;UBERON:0001008,2.23e-09,48;UBERON:0002100,5.12e-09,199;UBERON:0003914,8.30e-09,117;UBERON:0001225,4.81e-08,12;UBERON:0008987,4.81e-08,12;UBERON:0004921,4.75e-07,118;UBERON:0005256,6.98e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,4.18680700783456,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.851363990735132,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.243947412259191,0.132529768321485,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,2.94848165003288,4.13552934676983,0,1.96781501668982,0,0.219500570817251,0,0.502644862058154,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0.40101294060657,0.276242966807689,0,0,0.131124414959424,1.80479845162965,0,0.784349769176855,1.46139224653261,0,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0.509752546090077,1.66215201785745,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.470719003883896,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,1.94176834799221,0,0,0,0.296964680832639,0.307160702099232,0,0.422008249231538,0,0.659215496907038,0,0,0,0.251932747854276,0,0.246169610922139,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.349839999984783,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0,0,0,0.482385754501632,0,0.110579259931225,0,0,0,0,0,0,1.84451123510448,0.0897576444097721,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,1.13082457147153,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.522355239482415,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0.213452994739353,0,0.144090417154106,0.114536596165916,0.171594997861965,0,0,0.471388069233591,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,10.4781632468607,9.80748714735881,8.4928465256273,0.295282444544246,0,0,0.544813624446302,0,0.275078873194468,0.415440338029185,0,2.32140586367385,0,0,2.20655980437755,1.04909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56898487976713,0,0,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751145584238999,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28120759293973,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.0691572524642179,0.161475645631851,0,0,0.235939446695481,0.183428598521679,0,0,0,0,0,0,0.781514011233092,0,0,0.147856086217045,0.135075169236789,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0.118193840883968,0.222462803784138,0,0.157115589916002,0,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0.397901550322736,0,0,0,0.603851374266694,0.617393264863557,0,0,0,0.471353094203252,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0.5290268405154,0,0.924351257262837,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0.190941474834495,0,0,0,0,0.143444410785353,0.332660356546013,0.0814032686109745,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p9@RTKN | |||
}} |
Latest revision as of 11:04, 18 September 2015
Short description: | p9@RTKN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RTKN_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 25bp_to_ENST00000484453_5end |
EntrezGene: | RTKN |
HGNC: | 10466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.64e-30 | 12 |
endodermal cell | 6.90e-13 | 58 |
epithelial cell of nephron | 8.31e-11 | 15 |
intestinal epithelial cell | 8.96e-11 | 4 |
kidney cell | 1.47e-09 | 17 |
kidney epithelial cell | 1.47e-09 | 17 |
kidney tubule cell | 2.11e-09 | 10 |
nephron tubule epithelial cell | 2.11e-09 | 10 |
kidney cortical cell | 4.81e-08 | 12 |
renal cortical epithelial cell | 4.81e-08 | 12 |