FFCP PHASE1:Hg19::chr2:85581701..85581710,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54884 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25991 | |||
|TSSclassifier=strong | |||
|UniProt=Q6NUM9 | |||
|association_with_transcript=32bp_to_ENST00000295802_5end | |||
|cluster_id=chr2:85581701..85581710,- | |||
|description=CAGE_peak_3_at_RETSAT_5end | |||
|id=chr2:85581701..85581710,- | |||
|ontology_enrichment_celltype=CL:1000497!2.85e-07!18;CL:0002518!2.85e-07!18;CL:0000136!5.64e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.27e-17;13!CL:1000497;1.35e-09;17!CL:0002518;1.35e-09;17!CL:0002681;1.74e-07;12!CL:0002584;1.74e-07;12!CL:1000449;1.91e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.84e-17,15;CL:1000497,6.17e-10,17;CL:0002518,6.17e-10,17;CL:0002681,2.05e-07,12;CL:0002584,2.05e-07,12;CL:1000449,2.10e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.35e-11!365;UBERON:0000481!1.35e-08!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001225;1.74e-07;12!UBERON:0008987;1.74e-07;12!UBERON:0006555;1.91e-07;15!UBERON:0004819;1.91e-07;15!UBERON:0001285;1.91e-07;15!UBERON:0007684;1.91e-07;15!UBERON:0000353;3.22e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001225,2.05e-07,12;UBERON:0008987,2.05e-07,12;UBERON:0004211,2.10e-07,15;UBERON:0009773,2.10e-07,15;UBERON:0001231,2.10e-07,15;UBERON:0001285,2.10e-07,15;UBERON:0007684,2.10e-07,15;UBERON:0004208,2.10e-07,15;UBERON:0000353,3.19e-07,15;UBERON:0006555,7.95e-07,16;UBERON:0004819,7.95e-07,16 | |||
|phase1_expression=1.09007027562334,4.28201047781966,1.9733616573436,1.0007329835313,4.02264984984559,1.74467704820074,2.53299878168311,1.26343974685366,1.56711376919903,0.245733936501509,0.697801167972428,0.873765488520689,0.791300934685361,0.74259811776028,1.32558950291166,0,0,0.730310090387373,0.487932798790507,0.861847406537515,1.02000345622126,0.626909442956176,0,0.547497700291537,0.376627918784408,0.382067028739756,0.57470412614962,0.629686250509434,0,0,0.309632246632152,0.919421224478927,0.6024118375565,1.47901604066715,0.542270404062111,0,0.587200878669695,0,0,0.651032612147555,0.447830948479849,0.32389366601898,0.257575567634187,0.290796477559129,0,0.485168122375632,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0.365328307529268,0,0,0,0,0.800791974072025,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0,0,0,0.205601498999509,0.668745981562712,0,0,0,0.445641827540694,0,0.221533894583621,0.270803863765016,0.384273959177026,1.04047478047903,0.164437904603676,0,0,0,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0.150575119077773,0.639933055772092,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0.670700859703636,0.511450247374121,0,0.50133791063589,0.869079113764942,0,0.486634870302636,0.472674085820339,0.886917589850256,0.87834785693126,0.654895377488563,1.09288586487763,0.741568885568859,0,0,0.398873881556595,0,0,0.371457501329565,0,0.860234595106124,0.694281003215189,0,0.419499436209906,0,0.626984899610432,0,1.06729878806013,1.00416183829401,0,0,0.488124115096339,0,1.62028389576352,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,0.993943903390637,0.25326102332916,0.529636723252875,2.86836620748814,0,0,1.06748995729705,0.24666754841716,0,0.404132016209064,0.163461903113459,0.605429710579726,0.576175924479999,0.937285727335186,0.624320153660641,1.1409436430889,0.149448680551801,0.352303495931295,0.161872944368132,0.421352420106746,0.61246251376468,0.737005903870608,0.619954687054593,0,0,0,0,0.168336113954066,0,0.554128230968366,0.438977620880838,0.612975591598039,0.300476117813194,0,0.717558542755448,0.213557388818567,0.635795703478686,0.900273288253207,0.206105058476878,0.515281080091258,0.18611685633159,1.5189869901714,0.487185025805993,0.252433774244115,0.552299391853796,0,1.42003837006646,0.503760491138201,0.508681776931463,0.57978255948989,0.272746120590835,0.573609190778008,0,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,1.28648187638577,0,0.928735856063958,0.721879481669586,0.473227200159376,0.168584690078102,0.482022059766964,0.55146986366197,0.653638332277218,0.474541238222193,0.404493924480493,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0.441463099414651,0.614942192715568,0,0.98775256867763,0,0.502644862058154,0.833296006426766,0.977424915930974,1.03993478527958,0,0.463721619900307,0.939269553886573,0.577465791044295,0,0.380508304469197,0,0,0.246217006087397,0.468008530278475,0.743155811443641,0.93733833986777,0.839910640994298,1.13420077793909,1.34337784054272,0.581267877027924,0.383382679165211,0,0.704387472105808,0,0.576479813667846,0.12624243342638,0.63497894292169,0.763976851116555,2.34434894420094,1.71072446022705,1.02827492703324,0,1.14330573052231,0.448524337381443,0,0.2933531432838,0.517086863031111,0,0.845302752556,0,1.04007436911366,0.514414748524284,0,0.799266537048298,0.285955987316295,3.7983512377401,0,0,0.710783897485092,0,0.602878754119172,0.871533458600294,1.79951384127703,0,0,2.10833939483032,0.479249710983165,1.14861935834114,0,0.144781306667579,0.61642896765115,0.358121926479791,0.560425719967636,0.591092280605782,0.215627574859517,0.128343036279748,0.76228387266739,0,0,0.335032530668698,0,0,0,0.828831026872071,1.2269149171914,1.00034104211935,1.35632511849868,0.415941723061614,0.178428988797162,0.473107245101804,0.35142424497814,1.20378439891088,0,2.0694614258501,0,0.553107505625109,0.0868836144680828,0.783204629850962,1.71571711905428,0,0.215714200818617,0.426910231213777,0,0,0.30239029332968,1.73675465473144,1.07423381301644,0,0.256278298511402,1.02341449813341,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,1.03850885836724,0.348631135379878,0.362578348774867,2.40607764363942,0.920809889358963,0.803701137152247,0.546273504020151,0.262248829918848,1.35359883872224,0.616122696835318,0.784349769176855,2.92278449306521,0.844413031143006,1.13733384070897,1.02056223165909,1.0795795805107,1.54227252690289,0.541892875087706,1.50506932156456,1.52925763827023,0,1.11937377361089,0,0,0.512900250232778,1.31205858279882,0,0,0.824125183365091,0.660075999364704,0.574265537996172,0,0,0.580024309752732,0.462145851343933,0.460511024178389,0.137836572484531,0.214840489736547,0.145016693914229,0.170453254832202,0.445160178233687,1.15699440752685,2.11409074101617,1.02090169995667,0.708104465988849,0.929691098594572,5.35180989612088,0.6970372701606,0.924100740528266,1.06461206063404,0.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| |||
|short_description=p3@RETSAT | |||
}} |
Latest revision as of 16:01, 18 September 2015
Short description: | p3@RETSAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RETSAT_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000295802_5end |
EntrezGene: | RETSAT |
HGNC: | 25991 |
UniProt: | Q6NUM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.84e-17 | 15 |
kidney cell | 6.17e-10 | 17 |
kidney epithelial cell | 6.17e-10 | 17 |
kidney cortical cell | 2.05e-07 | 12 |
renal cortical epithelial cell | 2.05e-07 | 12 |
epithelial cell of nephron | 2.10e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cortex of kidney | 2.05e-07 | 12 |
renal parenchyma | 2.05e-07 | 12 |
nephron epithelium | 2.10e-07 | 15 |
renal tubule | 2.10e-07 | 15 |
nephron tubule | 2.10e-07 | 15 |
nephron | 2.10e-07 | 15 |
uriniferous tubule | 2.10e-07 | 15 |
nephrogenic mesenchyme | 2.10e-07 | 15 |
parenchyma | 3.19e-07 | 15 |
excretory tube | 7.95e-07 | 16 |
kidney epithelium | 7.95e-07 | 16 |