FFCP PHASE1:Mm9::chr11:54336430..54336441,+: Difference between revisions
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{{FFCP|EntrezGene=192786|HGNC=|MCL_coexpression_id=266|UniProt=B2RUJ6,Q5NCJ5|association_with_transcript=-6bp_to_ENSMUST00000041060,ENSMUST00000050145_5end|description=CAGE_peak_3_at_Rapgef6_5end|id=chr11:54336430..54336441,+|ontology_enrichment_celltype=CL:0000988!1.72e-09!32;CL:0002032!1.72e-09!32;CL:0000037!1.72e-09!32;CL:0000566!1.72e-09!32;CL:0000837!1.72e-09!32;CL:0000542!1.22e-08!13;CL:0000051!1.22e-08!13;CL:0000838!1.35e-08!12;CL:0002031!1.83e-08!25;CL:0000084!6.19e-08!11;CL:0000827!6.19e-08!11;CL:0000791!4.06e-07!9;CL:0000789!4.06e-07!9;CL:0002420!4.06e-07!9;CL:0002419!4.06e-07!9;CL:0000790!4.06e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.29e-13,32;CL:0002032,1.29e-13,32;CL:0000037,1.29e-13,32;CL:0000837,1.29e-13,32;CL:0002031,1.00e-11,25;CL:0000542,6.29e-11,13;CL:0000051,6.29e-11,13;CL:0000838,7.18e-11,12;CL:0000084,5.38e-10,11;CL:0000827,5.38e-10,11;CL:0000738,4.69e-09,17;CL:0002087,4.69e-09,17;CL:0000791,6.42e-09,9;CL:0000789,6.42e-09,9;CL:0002420,6.42e-09,9;CL:0002419,6.42e-09,9;CL:0000790,6.42e-09,9;CL:0000624,4.22e-08,8;CL:0002320,8.57e-08,46;CL:0000134,8.57e-08,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!4.37e-07!193;UBERON:0004120!4.37e-07!193;UBERON:0006603!4.37e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.57e-08,46|phase1_expression=1.28119077683835,0.348975407639361,1.36499771816861,0.60492842261366,1.00179145989269,1.34303417529512,0.934450562382103,3.09895976259783,23.3709278771767,18.4910975794375,9.24577028417727,6.62108919661292,2.22560948910567,3.4093956943409,0.999329285446988,2.63217847606774,2.09868563438444,6.46697438984387,8.08975158273859,7.21462408056651,0.680346321208558,1.88652807281682,2.08959831311148,0.95995453676044,0.68822784320151,1.14846392823004,2.15380998079537,0.861884930743556,0.570070258369122,1.51218077855958,0.665191531965914,2.54012269383853,1.23012957516914,0,1.1554064790051,0.664938581433969,0.816677425049476,3.34825304589526,3.906676722619,1.57057123192139,2.35292595212406,6.83045484958446,2.91306211818692,1.6366586336825,1.62203089951223,1.28482726513177,0,0.218025156380447,0,0.777719596297134,0,0,6.71130424230945,4.35217285206807,4.03312558970957,0.257259436035947,1.14613375975503,0.515672092277442,0.202316460859598,0,0,0.677689064138264,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0.220868540951614,0.489963196859816,0.0958454710182364,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0,0.908714319998209,0.982430281388212,1.44932244350839,0.860423876981386,0,0,0,1.79210754838934,0.842666520790511,0.340860645156116,0,0.35333957451034,0.985903938436763,5.13305909657271,0,0,0.865964164044856,1.26679932737549,1.01104889002957,1.48439043634778,3.6251303710604,0.890652834388949,0.867426633830679,0.608930956624282,0.922461989024234,0.753613202763113,1.64624189989987,0.628332956648377,1.48316980640624,0.722996784599558,0,0.647067399789637,1.10420759230197,0,1.86391761218122,0.585561594023094,1.04723353406728,0.255457055208591,2.51611761462433,1.19980546198682,2.03312363316904,0.299581278809645,0,0,0.521472960576829,1.02286182932132,0.62336413367868,0.486723789203273,1.83310854930569,1.99051152976149,2.77995034277042,0.210441855886474,0.520481771850815,0,0.360124259610698,0.452114453507145,1.49680298132921,0.768682321709099,0.843315521037559,0.776110112217047,0.215567992932842,0.378212160335639,0.703804496655795,0,1.11218899690239,1.0447564995665,0.823128545631774,1.79130840136644,0,3.60287069960601,1.42081749697796,0.207125772535502,0.234526059981096,0.900310307305074,0.946978942340841,0.787056926989615,1.23413690309903,0.930135779001631,0.804820204198858,1.40118410840603,1.81015834904829,0.820837320395476,1.05389452409612,0.877199924551994,1.3173006917463,1.20785776884335,0.630869845692382,0.205809224758569,0.330418782983798,0.264450566663544,1.2797295032114,0,1.15980715189884,0.605050573870028,0.444756087689741,0.190225626112559,1.42358718463353,0.494096864172033,1.75934646160189,1.98956472041151,0.58489226135736,0.898819408654221,0.864552199498777,1.7922714592893,0.189667900953082,1.37098215131675,2.25415471346161,0.814605311381257,1.74557238450863,0.701358198903186,0.758838445491087,0.295220295959204,0.627994911365499,0.740382983530803,0.889357881261447,0.667380422864376,1.17935397067922,1.34917267430912,0.202860121388503,0.482354319504834,1.01850340712568,0.863088412352432,0.810676133875177,0.823684239564244,4.31304619582064,2.60498663367952,1.24815069245824,1.51547326768267,1.4351793081753,1.4473305640901,1.84753190166605,0.568474235311454,0.325929952884052,0.339490171550376,0.704070744865506,0.502518772325447,0,1.75620283072019,1.7339865851681,0.664394068946325,1.11618338060241,1.47476983244164,1.55416483679306,0.723245292907558,1.50791283939272,1.08781136763742,0,0,0.160550589987792,0.820481806145422,0.819674726883377,2.01976741763498,0.315508219416257,0.780877488593277,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=192786 | |||
|HGNC= | |||
|MCL_coexpression_id=266 | |||
|TSSclassifier=NA | |||
|UniProt=B2RUJ6,Q5NCJ5 | |||
|association_with_transcript=-6bp_to_ENSMUST00000041060,ENSMUST00000050145_5end | |||
|cluster_id=chr11:54336430..54336441,+ | |||
|description=CAGE_peak_3_at_Rapgef6_5end | |||
|id=chr11:54336430..54336441,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.72e-09!32;CL:0002032!1.72e-09!32;CL:0000037!1.72e-09!32;CL:0000566!1.72e-09!32;CL:0000837!1.72e-09!32;CL:0000542!1.22e-08!13;CL:0000051!1.22e-08!13;CL:0000838!1.35e-08!12;CL:0002031!1.83e-08!25;CL:0000084!6.19e-08!11;CL:0000827!6.19e-08!11;CL:0000791!4.06e-07!9;CL:0000789!4.06e-07!9;CL:0002420!4.06e-07!9;CL:0002419!4.06e-07!9;CL:0000790!4.06e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.29e-13,32;CL:0002032,1.29e-13,32;CL:0000037,1.29e-13,32;CL:0000837,1.29e-13,32;CL:0002031,1.00e-11,25;CL:0000542,6.29e-11,13;CL:0000051,6.29e-11,13;CL:0000838,7.18e-11,12;CL:0000084,5.38e-10,11;CL:0000827,5.38e-10,11;CL:0000738,4.69e-09,17;CL:0002087,4.69e-09,17;CL:0000791,6.42e-09,9;CL:0000789,6.42e-09,9;CL:0002420,6.42e-09,9;CL:0002419,6.42e-09,9;CL:0000790,6.42e-09,9;CL:0000624,4.22e-08,8;CL:0002320,8.57e-08,46;CL:0000134,8.57e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.37e-07!193;UBERON:0004120!4.37e-07!193;UBERON:0006603!4.37e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.57e-08,46 | |||
|phase1_expression=1.28119077683835,0.348975407639361,1.36499771816861,0.60492842261366,1.00179145989269,1.34303417529512,0.934450562382103,3.09895976259783,23.3709278771767,18.4910975794375,9.24577028417727,6.62108919661292,2.22560948910567,3.4093956943409,0.999329285446988,2.63217847606774,2.09868563438444,6.46697438984387,8.08975158273859,7.21462408056651,0.680346321208558,1.88652807281682,2.08959831311148,0.95995453676044,0.68822784320151,1.14846392823004,2.15380998079537,0.861884930743556,0.570070258369122,1.51218077855958,0.665191531965914,2.54012269383853,1.23012957516914,0,1.1554064790051,0.664938581433969,0.816677425049476,3.34825304589526,3.906676722619,1.57057123192139,2.35292595212406,6.83045484958446,2.91306211818692,1.6366586336825,1.62203089951223,1.28482726513177,0,0.218025156380447,0,0.777719596297134,0,0,6.71130424230945,4.35217285206807,4.03312558970957,0.257259436035947,1.14613375975503,0.515672092277442,0.202316460859598,0,0,0.677689064138264,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0.220868540951614,0.489963196859816,0.0958454710182364,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0,0.908714319998209,0.982430281388212,1.44932244350839,0.860423876981386,0,0,0,1.79210754838934,0.842666520790511,0.340860645156116,0,0.35333957451034,0.985903938436763,5.13305909657271,0,0,0.865964164044856,1.26679932737549,1.01104889002957,1.48439043634778,3.6251303710604,0.890652834388949,0.867426633830679,0.608930956624282,0.922461989024234,0.753613202763113,1.64624189989987,0.628332956648377,1.48316980640624,0.722996784599558,0,0.647067399789637,1.10420759230197,0,1.86391761218122,0.585561594023094,1.04723353406728,0.255457055208591,2.51611761462433,1.19980546198682,2.03312363316904,0.299581278809645,0,0,0.521472960576829,1.02286182932132,0.62336413367868,0.486723789203273,1.83310854930569,1.99051152976149,2.77995034277042,0.210441855886474,0.520481771850815,0,0.360124259610698,0.452114453507145,1.49680298132921,0.768682321709099,0.843315521037559,0.776110112217047,0.215567992932842,0.378212160335639,0.703804496655795,0,1.11218899690239,1.0447564995665,0.823128545631774,1.79130840136644,0,3.60287069960601,1.42081749697796,0.207125772535502,0.234526059981096,0.900310307305074,0.946978942340841,0.787056926989615,1.23413690309903,0.930135779001631,0.804820204198858,1.40118410840603,1.81015834904829,0.820837320395476,1.05389452409612,0.877199924551994,1.3173006917463,1.20785776884335,0.630869845692382,0.205809224758569,0.330418782983798,0.264450566663544,1.2797295032114,0,1.15980715189884,0.605050573870028,0.444756087689741,0.190225626112559,1.42358718463353,0.494096864172033,1.75934646160189,1.98956472041151,0.58489226135736,0.898819408654221,0.864552199498777,1.7922714592893,0.189667900953082,1.37098215131675,2.25415471346161,0.814605311381257,1.74557238450863,0.701358198903186,0.758838445491087,0.295220295959204,0.627994911365499,0.740382983530803,0.889357881261447,0.667380422864376,1.17935397067922,1.34917267430912,0.202860121388503,0.482354319504834,1.01850340712568,0.863088412352432,0.810676133875177,0.823684239564244,4.31304619582064,2.60498663367952,1.24815069245824,1.51547326768267,1.4351793081753,1.4473305640901,1.84753190166605,0.568474235311454,0.325929952884052,0.339490171550376,0.704070744865506,0.502518772325447,0,1.75620283072019,1.7339865851681,0.664394068946325,1.11618338060241,1.47476983244164,1.55416483679306,0.723245292907558,1.50791283939272,1.08781136763742,0,0,0.160550589987792,0.820481806145422,0.819674726883377,2.01976741763498,0.315508219416257,0.780877488593277,0.646270193198397,0.716906393857656,0.445597348164788,0.283076530788832,1.61924280669958,0.584511715822624,0.790575555893047,0,0.709700426041343,1.42452482933804,1.30309567482861,1.81467135269789,0,0.485561272309963,1.51161778482376,0.377210159511796,0,1.22974059177571,1.80899805217755,0.727067458955011,0.712994756769443,0.632073515871632,0,0,1.36175842301515,0.36012218806262,0.129358683782755,0.214337035031592,0.354680467284547,0.891844088010353,0.658196082408484,0.304464949114599,1.87737366450968,0.42366414172764,0.441056796109924,2.80306630000516,1.29171541356724,1.02531972377865,1.90995750405018,2.9545361954111,0,0.370850604021019,1.19609616558497,0.412773735926445,1.11116716421827,1.69531611304222,2.1871076435364,2.51655990527175,3.0596117398894,2.93898049879682,3.31679937130617,0.954670618015114,0.474503990371703,0,1.08005340821801,0,0.87345025498471,0.539457385539283,1.1571483801547,0.26175594198403,0.648074866458964,1.24267862617385,0,1.64468200648377,1.15820943319968,1.16670713006429,1.29159823477731,1.01373675294467,2.11243029562357,1.95306577265925,3.25063967719704,2.41584120826006,0.864090018773596,0.316011120628178,0.405450430580328,0.924398614483445,0.909445760844565,0.537080087002444,0.993406773906324,1.56254084375959,0.886137163047463,0.605798699688886,0.990688486514998,1.10908803650525,1.94915761479505,0.96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| |||
|short_description=p3@Rapgef6 | |||
}} |
Latest revision as of 17:02, 1 October 2015
Short description: | p3@Rapgef6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rapgef6_5end |
Coexpression cluster: | MCL_coexpression_mm9:266 |
Association with transcript: | -6bp_to_ENSMUST00000041060, ENSMUST00000050145_5end |
EntrezGene: | Rapgef6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.29e-13 | 32 |
hematopoietic oligopotent progenitor cell | 1.29e-13 | 32 |
hematopoietic stem cell | 1.29e-13 | 32 |
hematopoietic multipotent progenitor cell | 1.29e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 1.00e-11 | 25 |
lymphocyte | 6.29e-11 | 13 |
common lymphoid progenitor | 6.29e-11 | 13 |
lymphoid lineage restricted progenitor cell | 7.18e-11 | 12 |
T cell | 5.38e-10 | 11 |
pro-T cell | 5.38e-10 | 11 |
leukocyte | 4.69e-09 | 17 |
nongranular leukocyte | 4.69e-09 | 17 |
mature alpha-beta T cell | 6.42e-09 | 9 |
alpha-beta T cell | 6.42e-09 | 9 |
immature T cell | 6.42e-09 | 9 |
mature T cell | 6.42e-09 | 9 |
immature alpha-beta T cell | 6.42e-09 | 9 |
CD4-positive, alpha-beta T cell | 4.22e-08 | 8 |
connective tissue cell | 8.57e-08 | 46 |
mesenchymal cell | 8.57e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.57e-08 | 46 |