FFCP PHASE1:Hg19::chr9:33240157..33240173,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:33240157..33240173,+
|short_description=p1@SPINK4
|description=CAGE_peak_1_at_SPINK4_5end
|association_with_transcript=0bp_to_ENST00000379721_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27290 | |EntrezGene=27290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16646 | |HGNC=16646 | ||
|TSSclassifier=strong | |||
|UniProt=O60575 | |UniProt=O60575 | ||
|association_with_transcript=0bp_to_ENST00000379721_5end | |||
|cluster_id=chr9:33240157..33240173,+ | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_1_at_SPINK4_5end | |||
|id=chr9:33240157..33240173,+ | |||
|ontology_enrichment_celltype=CL:0002274!8.49e-12!5;CL:0000457!8.49e-12!5;CL:0002191!8.49e-12!5;CL:0000097!8.49e-12!5;CL:0000831!8.49e-12!5;CL:0002028!8.49e-12!5;CL:0002150!1.11e-08!3;CL:0000861!1.11e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002379;2.52e-07;1!CL:0000817;2.67e-07;1!CL:0000319;3.51e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,2.52e-07,1;CL:0000319,3.85e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.35e-09;3!UBERON:0006242;1.44e-07;1!UBERON:0001045;1.74e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;2.52e-07;1!DOID:3565;2.52e-07;1!DOID:3030;3.51e-07;1!DOID:9119;5.03e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.52e-07,1;DOID:3565,2.52e-07,1;DOID:3030,3.85e-07,1;DOID:9119,4.60e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!2.95e-09!35;UBERON:0000059!2.00e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.60e-16;17!UBERON:0001905;8.78e-13;2!UBERON:0002757;8.78e-13;2!UBERON:0010134;8.78e-13;2!UBERON:0005408;8.78e-13;2!UBERON:0001899;8.78e-13;2!UBERON:0005409;2.63e-12;22!UBERON:0002108;1.23e-11;4!UBERON:0001155;2.84e-11;9!UBERON:0000059;3.08e-09;11!UBERON:0002294;3.65e-08;7!UBERON:0001173;3.65e-08;7!UBERON:0001154;1.74e-07;1!UBERON:0001153;1.74e-07;1!UBERON:0009854;1.74e-07;1!UBERON:0004921;2.22e-07;33!UBERON:0001282;5.03e-07;1!UBERON:0009842;5.03e-07;1!UBERON:0003704;5.03e-07;1!UBERON:0001171;5.03e-07;1!UBERON:0001172;5.03e-07;1!UBERON:0003296;8.22e-07;4!UBERON:0010133;8.22e-07;4!UBERON:0002784;8.22e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.66e-16,17;UBERON:0001905,1.08e-12,2;UBERON:0002757,1.08e-12,2;UBERON:0010134,1.08e-12,2;UBERON:0005408,1.08e-12,2;UBERON:0001899,1.08e-12,2;UBERON:0002108,1.25e-11,4;UBERON:0001155,2.84e-11,9;UBERON:0005409,8.88e-11,25;UBERON:0000059,3.08e-09,11;UBERON:0001154,1.74e-07,1;UBERON:0001153,1.74e-07,1;UBERON:0001045,1.74e-07,1;UBERON:0001282,4.08e-07,1;UBERON:0009842,4.08e-07,1;UBERON:0003704,4.08e-07,1;UBERON:0001171,4.08e-07,1;UBERON:0001172,4.08e-07,1;UBERON:0003296,9.11e-07,4;UBERON:0010133,9.11e-07,4;UBERON:0002784,9.11e-07,4 | |||
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| ||
|short_description=p1@SPINK4 | |||
}} | }} |
Latest revision as of 03:35, 17 September 2015
Short description: | p1@SPINK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPINK4_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | 0bp_to_ENST00000379721_5end |
EntrezGene: | SPINK4 |
HGNC: | 16646 |
UniProt: | O60575 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 2.52e-07 | 1 |
mucus secreting cell | 3.85e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.66e-16 | 17 |
pineal body | 1.08e-12 | 2 |
regional part of epithalamus | 1.08e-12 | 2 |
secretory circumventricular organ | 1.08e-12 | 2 |
circumventricular organ | 1.08e-12 | 2 |
epithalamus | 1.08e-12 | 2 |
small intestine | 1.25e-11 | 4 |
colon | 2.84e-11 | 9 |
gastrointestinal system | 8.88e-11 | 25 |
large intestine | 3.08e-09 | 11 |
vermiform appendix | 1.74e-07 | 1 |
caecum | 1.74e-07 | 1 |
midgut | 1.74e-07 | 1 |
intralobular bile duct | 4.08e-07 | 1 |
acinus | 4.08e-07 | 1 |
intrahepatic bile duct | 4.08e-07 | 1 |
portal lobule | 4.08e-07 | 1 |
hepatic acinus | 4.08e-07 | 1 |
gland of diencephalon | 9.11e-07 | 4 |
neuroendocrine gland | 9.11e-07 | 4 |
regional part of diencephalon | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.52e-07 | 1 |
meningioma | 2.52e-07 | 1 |
mucinous adenocarcinoma | 3.85e-07 | 1 |
acute myeloid leukemia | 4.60e-07 | 1 |