FFCP PHASE1:Hg19::chr3:112357078..112357094,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-134bp_to_ENST00000461431_5end | |||
|cluster_id=chr3:112357078..112357094,- | |||
|coexpression_cluster_id=C1078 | |||
|description=CAGE_peak_28_at_CCDC80_5end | |||
|id=chr3:112357078..112357094,- | |||
|ontology_enrichment_celltype=CL:0000055!3.52e-17!180;CL:0000057!1.37e-13!75;CL:0002334!4.60e-09!12;CL:0002620!6.99e-09!23;CL:0000680!9.04e-09!57;CL:0000056!9.04e-09!57;CL:0000355!9.04e-09!57;CL:0000187!1.24e-07!54;CL:0000183!9.99e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.38e-11;23!CL:0000136;9.52e-10;13!CL:1000306;5.24e-09;4!CL:0002547;5.24e-09;4!CL:0002334;9.67e-08;12!CL:0000135;1.50e-07;3!CL:0000388;1.50e-07;3!CL:0002615;1.58e-07;3!CL:0002579;2.18e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.30e-15,76;CL:0000136,1.44e-12,15;CL:0002620,1.07e-10,23;CL:1000306,4.26e-09,4;CL:0002547,4.26e-09,4;CL:0002334,1.06e-07,12;CL:0000135,1.78e-07,3;CL:0000388,1.78e-07,3;CL:0002615,1.90e-07,3;CL:0002579,3.67e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.56e-08;4!UBERON:0007284;1.56e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.13e-11;5!DOID:450;8.13e-11;5!DOID:66;8.13e-11;5!DOID:423;8.13e-11;5!DOID:0080000;8.13e-11;5!DOID:11722;8.13e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.46e-10,5;DOID:450,1.46e-10,5;DOID:66,1.46e-10,5;DOID:423,1.46e-10,5;DOID:0080000,1.46e-10,5;DOID:11722,1.46e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0002385!6.49e-09!63;UBERON:0001015!6.49e-09!63;UBERON:0000383!6.49e-09!63;UBERON:0001134!8.10e-09!61;UBERON:0002036!8.10e-09!61;UBERON:0003082!8.10e-09!61;UBERON:0004290!2.49e-08!70;UBERON:0000914!5.32e-08!83;UBERON:0002329!5.32e-08!83;UBERON:0003077!5.32e-08!83;UBERON:0003059!5.32e-08!83;UBERON:0007282!5.32e-08!83;UBERON:0009618!5.32e-08!83;UBERON:0007285!5.32e-08!83;UBERON:0000486!1.00e-07!82;UBERON:0002199!2.74e-07!45;UBERON:0002416!2.74e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.77e-15;9!UBERON:0000042;2.77e-15;9!UBERON:0003688;2.96e-13;6!UBERON:0002358;2.96e-13;6!UBERON:0003684;2.96e-13;6!UBERON:0001178;2.96e-13;6!UBERON:0001013;2.14e-10;14!UBERON:0004797;5.24e-09;4!UBERON:0000415;5.24e-09;4!UBERON:0007240;5.24e-09;4!UBERON:0005742;5.24e-09;4!UBERON:0005734;5.24e-09;4!UBERON:0004664;5.24e-09;4!UBERON:0004663;5.24e-09;4!UBERON:0007846;1.50e-07;3!UBERON:0000043;1.50e-07;3!UBERON:0007845;1.50e-07;3!UBERON:0002199;3.66e-07;46!UBERON:0002416;3.66e-07;46!UBERON:0003978;5.51e-07;3!UBERON:0000946;5.51e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004797,1.64e-14,7;UBERON:0003688,5.94e-13,6;UBERON:0002358,5.94e-13,6;UBERON:0003684,5.94e-13,6;UBERON:0001178,5.94e-13,6;UBERON:0004457,7.55e-11,12;UBERON:0000042,7.55e-11,12;UBERON:0001013,1.13e-10,14;UBERON:0002199,3.31e-09,46;UBERON:0002416,3.31e-09,46;UBERON:0000415,4.26e-09,4;UBERON:0007240,4.26e-09,4;UBERON:0005742,4.26e-09,4;UBERON:0005734,4.26e-09,4;UBERON:0004664,4.26e-09,4;UBERON:0004663,4.26e-09,4;UBERON:0002097,3.47e-08,41;UBERON:0007846,1.78e-07,3;UBERON:0000043,1.78e-07,3;UBERON:0007845,1.78e-07,3;UBERON:0003978,4.43e-07,3;UBERON:0009751,4.43e-07,3;UBERON:0000946,4.43e-07,3;UBERON:0002523,4.43e-07,3;UBERON:0005983,4.43e-07,3;UBERON:0002165,4.43e-07,3;UBERON:0002062,4.43e-07,3;UBERON:0007280,4.43e-07,3;UBERON:0002384,4.64e-07,371 | |||
|phase1_expression=1.09007027562334,5.35251309727458,3.24195129420734,3.00219895059391,3.12872766099101,6.10636966870258,5.06599756336621,0,1.30592814099919,0,0,0.436882744260345,0.527533956456907,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,1.34140171940727,0.767175371061182,3.61439152384566,1.00267582127178,4.05570253090306,0,0.973269740605272,0,0.665188192387692,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,5.96366342034382,1.8994576749687,1.05927344650575,12.9076479336966,5.32002573297536,1.68203280042692,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,1.15235184896,0,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0.45071417671979,0,7.71375433462106,1.2813443329114,2.33125091275518,5.10154863343484,1.03052529238439,4.12224864073007,0.930584281657949,2.36286865137773,0.68205903612839,5.04867548488229,1.56484827691909,1.2931684545505,12.0703261455649,1.30977727695932,0.67824236924195,0,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,3.25057549622385,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.2933531432838,0.258543431515556,0,1.690605505112,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0.599837947092342,0,0,0,0.239624855491583,0,0,1.59259437334337,1.02738161275192,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,1.50051156317903,0.542530047399471,1.24782516918484,1.60586089917446,0.473107245101804,0.819989904948992,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,1.81434175997808,1.98486246255021,0.767309866440312,2.80660094433074,4.35673107469383,1.02341449813341,9.65123526861645,2.96836132889982,0.616838775210622,0.355123450626254,0.246381468041427,1.03850885836724,0.697262270759755,0,0,0.276242966807689,0.574072240823034,0,2.36023946926963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.183138929636687,0,0,0,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0.107420244868274,0.290033387828457,0.0852266274161009,0.445160178233687,0,0,0,0,0.929691098594572,11.9628691795643,0,0,0.532306030317022,0,0.55597265731176,0.429374660225974,0.744316738719335,0,0.571890581771475,0.255897791311334,0.855877976067841,0,0,0,1.09814811894422,0.589062011728432,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,2.68670320712054,0,0,0.66343897524122,0.876901770507525,0.578775534266688,1.31178950409327,0.202910376962704,0.30982349809975,1.12678241012897,0.286822704408103,0.392996164052485,0.35667105148125,0,4.85547561184627,6.25660296623814,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48482340416319,0.614321404198464,0,0,0,0,0,2.19172787076177,0.276283915531148,0,0,0,3.73247505194169,0,0,0,0.197286811273867,0,1.11136990144637,0,0,1.99613798001194,0,0,0,0,0.254253650292766,0,0,0,0,0.885741385813839,0,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0.995261931078505,0,0.611030144933625,0,0,0,0.067401132980677,4.81546588379273,0,0,0,0,0.789168805698781,1.20990716048664,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,1.04836000945218,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0.203996435272644,0,0,0,0,0,0,3.90995361781156,2.52076466412852,1.43574604915363,0,0.429226048136571,0.446342914883745,0.134366944973453,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57347663186684,0,0,0.542999601753713,0.864221491201268,1.30634944043764,0,0,1.70388021785422,0.113312091520126,0,0,0.775697738169303,0.39669780522807,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0.573409195690071,0.221858103073705,0,0,0,0,0,0,0,0,0.74627401443437,1.16856654923612,2.77402930751307,0.189403005275089,1.76097531226803,0.889811221596536,1.14420034198462,3.32708032279126,0.15543720058278,0.295710299979268,0.477890301491107,0.449803112163605,0.155262956876259,1.24411862352257,1.59505028734797,1.04349012362347,1.35231848097497,2.66563648518157,0,0.181848659202559,0.107410557042488,1.85613503951397,0.796191777397232,0.400027764663154,1.71697852591396,1.6837474438296,0,0,0,0.260994291965212,0.6801177765368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| |||
|short_description=p28@CCDC80 | |||
}} |
Latest revision as of 14:06, 19 September 2015
Short description: | p28@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_CCDC80_5end |
Coexpression cluster: | C1078_Cardiac_Preadipocyte_Fibroblast_Chondrocyte_Synoviocyte_Ewing_Smooth |
Association with transcript: | -134bp_to_ENST00000461431_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.30e-15 | 76 |
fat cell | 1.44e-12 | 15 |
skin fibroblast | 1.07e-10 | 23 |
fibroblast of tunica adventitia of artery | 4.26e-09 | 4 |
fibroblast of the aortic adventitia | 4.26e-09 | 4 |
preadipocyte | 1.06e-07 | 12 |
fibrocyte | 1.78e-07 | 3 |
tendon cell | 1.78e-07 | 3 |
adipocyte of omentum tissue | 1.90e-07 | 3 |
omentum preadipocyte | 3.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel layer | 1.64e-14 | 7 |
omentum | 5.94e-13 | 6 |
peritoneum | 5.94e-13 | 6 |
abdominal cavity | 5.94e-13 | 6 |
visceral peritoneum | 5.94e-13 | 6 |
cavity lining | 7.55e-11 | 12 |
serous membrane | 7.55e-11 | 12 |
adipose tissue | 1.13e-10 | 14 |
integument | 3.31e-09 | 46 |
integumental system | 3.31e-09 | 46 |
artery wall | 4.26e-09 | 4 |
tunica adventitia of artery | 4.26e-09 | 4 |
adventitia | 4.26e-09 | 4 |
tunica adventitia of blood vessel | 4.26e-09 | 4 |
aorta tunica adventitia | 4.26e-09 | 4 |
aorta wall | 4.26e-09 | 4 |
skin of body | 3.47e-08 | 41 |
dense regular connective tissue | 1.78e-07 | 3 |
tendon | 1.78e-07 | 3 |
regular connective tissue | 1.78e-07 | 3 |
valve | 4.43e-07 | 3 |
cardiac mesenchyme | 4.43e-07 | 3 |
cardial valve | 4.43e-07 | 3 |
tunica intima | 4.43e-07 | 3 |
heart layer | 4.43e-07 | 3 |
endocardium | 4.43e-07 | 3 |
endocardial cushion | 4.43e-07 | 3 |
presumptive endocardium | 4.43e-07 | 3 |
connective tissue | 4.64e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.46e-10 | 5 |
myotonic disease | 1.46e-10 | 5 |
muscle tissue disease | 1.46e-10 | 5 |
myopathy | 1.46e-10 | 5 |
muscular disease | 1.46e-10 | 5 |
myotonic dystrophy | 1.46e-10 | 5 |