FFCP PHASE1:Hg19::chr3:112359880..112359894,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=8bp_to_ENST00000475181_5end | |||
|cluster_id=chr3:112359880..112359894,- | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_2_at_CCDC80_5end | |||
|id=chr3:112359880..112359894,- | |||
|ontology_enrichment_celltype=CL:0000055!2.53e-30!180;CL:0000057!5.40e-17!75;CL:0000680!2.60e-15!57;CL:0000056!2.60e-15!57;CL:0000355!2.60e-15!57;CL:0000187!5.20e-14!54;CL:0000183!1.36e-12!59;CL:0000222!5.82e-11!119;CL:0000393!5.91e-11!60;CL:0000211!5.91e-11!60;CL:0000192!6.38e-11!42;CL:0000514!6.38e-11!42;CL:0002620!5.60e-09!23;CL:0000359!9.07e-09!32;CL:0000136!7.03e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.26e-09;23!CL:0000192;1.24e-08;43!CL:0000187;1.41e-08;55!CL:0000359;1.61e-08;32!CL:0000134;1.18e-07;55!CL:0000057;3.48e-07;73!CL:0000136;4.35e-07;13!CL:0002320;6.06e-07;188!CL:0000048;7.15e-07;58!CL:0002494;8.75e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.90e-18,76;CL:0000680,2.98e-16,58;CL:0000056,2.98e-16,58;CL:0000355,2.98e-16,58;CL:0000187,6.74e-15,55;CL:0000192,1.10e-11,43;CL:0000514,1.10e-11,43;CL:0000393,2.30e-11,61;CL:0000211,2.30e-11,61;CL:0000222,3.74e-10,121;CL:0000359,4.91e-09,32;CL:0002620,6.19e-09,23;CL:0000136,4.10e-08,15;CL:0002494,8.72e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000355;4.51e-09;58!CL:0000514;1.24e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.41e-17!83;UBERON:0002329!5.41e-17!83;UBERON:0003077!5.41e-17!83;UBERON:0003059!5.41e-17!83;UBERON:0007282!5.41e-17!83;UBERON:0009618!5.41e-17!83;UBERON:0007285!5.41e-17!83;UBERON:0004290!4.59e-16!70;UBERON:0002385!6.89e-16!63;UBERON:0001015!6.89e-16!63;UBERON:0000383!6.89e-16!63;UBERON:0001134!1.52e-15!61;UBERON:0002036!1.52e-15!61;UBERON:0003082!1.52e-15!61;UBERON:0000486!1.82e-15!82;UBERON:0004872!2.48e-14!84;UBERON:0000475!1.05e-13!365;UBERON:0005256!1.74e-11!143;UBERON:0000468!1.88e-11!659;UBERON:0000481!6.24e-11!347;UBERON:0000119!5.73e-10!312;UBERON:0004923!7.93e-10!57;UBERON:0002100!1.61e-09!216;UBERON:0007100!1.66e-09!27;UBERON:0000490!1.68e-09!138;UBERON:0000483!1.88e-09!309;UBERON:0000948!2.24e-09!24;UBERON:0005498!2.24e-09!24;UBERON:0004140!2.24e-09!24;UBERON:0009881!2.24e-09!24;UBERON:0004141!2.24e-09!24;UBERON:0003084!2.24e-09!24;UBERON:0007005!2.24e-09!24;UBERON:0004139!2.24e-09!24;UBERON:0004291!2.24e-09!24;UBERON:0002049!3.36e-09!79;UBERON:0007798!3.36e-09!79;UBERON:0003102!5.45e-09!95;UBERON:0000467!9.28e-09!625;UBERON:0000480!1.52e-08!626;UBERON:0001981!4.09e-08!60;UBERON:0007500!4.09e-08!60;UBERON:0004537!4.09e-08!60;UBERON:0006965!4.09e-08!60;UBERON:0002199!5.60e-08!45;UBERON:0002416!5.60e-08!45;UBERON:0003104!8.50e-08!238;UBERON:0009142!8.50e-08!238;UBERON:0000477!8.87e-08!286;UBERON:0001637!9.06e-08!42;UBERON:0003509!9.06e-08!42;UBERON:0004572!9.06e-08!42;UBERON:0001009!1.05e-07!113;UBERON:0003914!1.21e-07!118;UBERON:0004535!2.16e-07!110;UBERON:0000055!3.77e-07!69;UBERON:0004573!4.55e-07!33;UBERON:0004571!4.55e-07!33;UBERON:0002097!7.51e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.01e-09;25!UBERON:0000948;5.49e-09;22!UBERON:0002385;1.61e-07;31!UBERON:0001015;1.61e-07;31!UBERON:0000383;1.61e-07;31!UBERON:0002384;5.33e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,5.02e-17,71;UBERON:0003059,5.02e-17,71;UBERON:0007282,5.02e-17,71;UBERON:0004290,5.02e-17,71;UBERON:0009618,5.02e-17,71;UBERON:0007524,7.26e-17,73;UBERON:0002385,7.54e-17,64;UBERON:0001015,7.54e-17,64;UBERON:0000383,7.54e-17,64;UBERON:0001134,1.72e-16,62;UBERON:0002036,1.72e-16,62;UBERON:0003082,1.72e-16,62;UBERON:0003077,2.38e-16,72;UBERON:0007285,2.38e-16,72;UBERON:0000486,6.76e-16,83;UBERON:0007503,2.54e-14,78;UBERON:0004872,9.13e-14,83;UBERON:0005256,8.64e-13,122;UBERON:0003104,2.31e-11,160;UBERON:0009142,2.31e-11,160;UBERON:0000490,1.02e-10,148;UBERON:0007100,8.43e-10,27;UBERON:0000948,1.15e-09,24;UBERON:0005498,1.15e-09,24;UBERON:0004140,1.15e-09,24;UBERON:0009881,1.15e-09,24;UBERON:0004141,1.15e-09,24;UBERON:0003084,1.15e-09,24;UBERON:0007005,1.15e-09,24;UBERON:0004139,1.15e-09,24;UBERON:0004291,1.15e-09,24;UBERON:0004923,3.83e-09,66;UBERON:0003102,1.11e-08,99;UBERON:0000119,1.25e-08,309;UBERON:0002049,2.10e-08,78;UBERON:0007798,2.10e-08,78;UBERON:0000483,3.83e-08,306;UBERON:0002199,3.86e-08,46;UBERON:0002416,3.86e-08,46;UBERON:0002100,9.11e-08,199;UBERON:0001009,1.03e-07,112;UBERON:0001637,1.60e-07,42;UBERON:0003509,1.60e-07,42;UBERON:0004572,1.60e-07,42;UBERON:0007500,2.01e-07,59;UBERON:0001981,2.01e-07,59;UBERON:0004537,2.01e-07,59;UBERON:0006965,2.01e-07,59;UBERON:0004535,2.16e-07,109;UBERON:0003914,2.85e-07,117;UBERON:0000926,4.77e-07,315;UBERON:0004120,4.77e-07,315;UBERON:0006603,4.77e-07,315;UBERON:0004573,5.08e-07,33;UBERON:0004571,5.08e-07,33;UBERON:0002097,5.60e-07,41 | |||
|phase1_expression=240.178817395676,277.688379486605,710.410196643695,195.142931788604,263.7070457121,252.978171989107,27.8629865985142,93.494541267171,79.4004309727509,4.66894479352867,1.39560233594486,129.972616417453,87.3068697936181,34.7783451817731,42.0874667174453,24.2037052722639,12.0538905604795,8.76372108464848,13.6621183661342,36.1975910745756,27.3360926267299,16.9265549598167,10.304495536718,2.73748850145768,10.168953807179,0,0,0,0,0,8.97933515233241,0,0.6024118375565,0,0,0,0,1.66198622559563,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,892.3331307091,107.312137552582,503.650631101666,227.345226849892,244.151562479678,186.272623383619,66.0087336052412,117.279003742935,13.7075484887898,23.5033161310318,16.0737657818421,24.1001498915791,0.728590576585084,0.741568885568859,0,0,0,0,0,0,4.17401055470081,4.30117297553062,4.16568601929113,3.95715559346807,0.838998872419812,1.37559020970034,1.67195973229448,0.775250277507987,1.42306505074684,2.00832367658802,6.0424397566372,0.760272105718513,7.56592378399325,1.83831540172934,0.81014194788176,5.98308179503334,4.71511682514957,3.49095589498299,0,1.89853131913626,1.46561395144326,0,0,1.74437620857014,604.814865213203,449.664946920923,368.362341022375,1353.8688499344,195.776946973493,445.178014512992,28.8222288470203,70.7935863957249,482.688315905038,19.3983367780351,14.0577236677575,98.9877576797851,61.6508239193599,2.81185718200556,1.87296046098192,9.69802096625564,5.67904986096844,12.2131878589515,9.38863077335163,9.69110566245515,10.4118627339996,1.71968044236475,7.33613046347935,11.8800285728205,12.3633464639278,27.3048408581408,10.7792721272436,2.86171393721913,3.00284447692714,18.0091675064719,112.817248566375,74.1700465833628,27.4935647799072,45.4863054471684,604.184293000087,381.840611207599,473.032003388142,619.688113414291,485.995727888478,315.094380475804,268.752740542816,822.615843343932,407.676429594455,391.272350078377,389.186971459642,286.113520569297,1280.87460979994,552.423754582152,115.470763363442,5.02478218224572,4.90943017063502,5.16248271700207,0.365921118388786,0.265059536642971,0.69716365721711,1.34759371519982,0.252320850875628,0.36497735907583,61.0153176086282,186.539872075937,41.4404764057442,96.5885290306516,85.9036583186807,1.41968160047813,0.674338760312407,0.241011029883482,0.55146986366197,0.653638332277218,0.237270619111097,0.808987848960987,0.98110732562673,0.38474715694639,0,4.20725321410337,81.4916542436172,33.8120036186747,0,0,2.36315962672562,0,0.737930631258681,24.3626290623906,0.878002283269004,0,1.20634766893957,1.574003567695,1.95484983186195,1.03993478527958,8.6598805215164,3.014190529352,195.485475902643,6.35212370148725,1.85194205030644,6.84914948044554,0,0,0,0,0.148631162288728,5.62403003920662,16.6302306916871,1.98485136139341,2.5971971583826,0.871901815541886,0.383382679165211,0,0,3.52457796419313,0.432359860250884,1.64115163454294,1.14296209725904,0.381988425558278,1.17217447210047,17.1072446022705,3.29047976650635,1.20137223137567,4.85904935471983,41.1521079547474,55.8028888106599,45.1030457798843,67.9969224885911,64.3781602533388,18.596660556232,32.1785121067693,12.4808924293639,7.20180647933998,2.83698264046557,11.9889980557245,77.2081165753997,9.22456729165453,27.1669311137654,31.2706736921986,69.656821953539,7.91951872933429,33.7612102306736,41.8336060128141,32.7911411077147,0,0,0,71.6478317919832,63.1740647087626,138.357797889497,272.188856535049,64.31408895827,159.364257283507,0,0,0,0,11.9424473384558,0,1.54657762555539,0.335032530668698,0,0,0,0,78.890629175407,19.0064798002677,29.5678875832712,97.5383340579485,197.520890598458,76.9587785365601,232.174284515558,236.543634385987,34.1111256083977,39.3197670911519,96.9769373861737,58.8137647648033,44.8319450655308,10.3774613455252,12.6963066810017,0,0,0,61.5348970035907,504.299381716806,108.558115305355,263.242384095722,265.182289841772,151.837111088293,727.445950324614,221.057531596816,376.880737239472,143.965524451641,23.748292845609,50.249968263615,54.6145587491831,6.23105315020345,32.5389059687886,0.604297247958111,2.20557117333613,1.01289087829486,123.195902880623,45.3407008336725,107.784269096647,0,1.5403067420883,1.56869953835371,0,0.633309773357254,0,0,8.85255256018771,1.54227252690289,2.16757150035082,0.501689773854853,0.254876273045038,0.831076008928724,1.34324852833307,0,0,5.12900250232778,20.9929373247812,4.55529752530024,8.65544497840867,20.6946990489456,17.7395424829264,16.653700601889,5.85054221432869,261.91480564598,12.1805105048074,18.177736819528,23.0255512089194,14.1971669659066,55.2140058622926,33.0638062124441,16.022605954227,136.397078610802,5.61968712227326,4.42037154939744,10.2090169995667,3.13589120652205,63.2189947044309,1067.84348044953,50.8837207217238,146.007917003466,77.7166804262852,31.3175877147026,83.395898596764,72.993692238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| |||
|short_description=p2@CCDC80 | |||
}} |
Latest revision as of 14:39, 19 September 2015
Short description: | p2@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 8bp_to_ENST00000475181_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.90e-18 | 76 |
muscle precursor cell | 2.98e-16 | 58 |
myoblast | 2.98e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.98e-16 | 58 |
muscle cell | 6.74e-15 | 55 |
smooth muscle cell | 1.10e-11 | 43 |
smooth muscle myoblast | 1.10e-11 | 43 |
electrically responsive cell | 2.30e-11 | 61 |
electrically active cell | 2.30e-11 | 61 |
mesodermal cell | 3.74e-10 | 121 |
vascular associated smooth muscle cell | 4.91e-09 | 32 |
skin fibroblast | 6.19e-09 | 23 |
fat cell | 4.10e-08 | 15 |
cardiocyte | 8.72e-07 | 16 |