FFCP PHASE1:Mm9::chr11:75281697..75281706,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=380712|HGNC=|MCL_coexpression_id=28|UniProt=Q8VC26|association_with_transcript=116bp_to_ENSMUST00000043598,ENSMUST00000108435,NM_027249,uc007kdw.1,uc011xzl.1_5end|description=CAGE_peak_3_at_Tlcd2_5end|id=chr11:75281697..75281706,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000057,1.78e-07,1;CL:0000632,1.78e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.51e-08!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.16e-13,22;UBERON:0007499,1.16e-13,22;UBERON:0006925,1.16e-13,22;UBERON:0009497,1.16e-13,22;UBERON:0000015,1.16e-13,22;UBERON:0002423,1.16e-13,22;UBERON:0006235,1.16e-13,22;UBERON:0008835,1.16e-13,22;UBERON:0003894,1.16e-13,22;UBERON:0004161,1.16e-13,22;UBERON:0008836,1.16e-13,22;UBERON:0001962,3.47e-13,2;UBERON:0001961,3.47e-13,2;UBERON:0001744,3.47e-13,2;UBERON:0009854,4.79e-13,23;UBERON:0009856,4.79e-13,23;UBERON:0002365,5.85e-12,25;UBERON:0002330,5.85e-12,25;UBERON:0002465,4.24e-09,3;UBERON:0003929,2.22e-08,55;UBERON:0003199,1.33e-07,1;UBERON:0000344,8.19e-07,15;UBERON:0000490,8.20e-07,66|phase1_expression=0.160148847104794,2.09385244583617,1.36499771816861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,2.06468352960453,0,0,0.430942465371778,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0.289864488701678,1.72084775396277,0.679971333707751,2.69851595818909,0,4.48026887097336,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,34.5124643653817,0,0.229902104433473,0,0,0,0,0,9.05461797586555,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0,0.697601834251224,0.268273401399619,0.233530684734339,0.16455984991348,0.32833492815819,0.0810688095458557,0.438599962275997,0.658650345873152,0,0,0,0,0.264450566663544,0.213288250535234,0,0,0,0.22237804384487,0,0.474529061544512,0.823494773620054,1.50801125280162,0.397912944082302,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0.156998727841375,0,1.77871576252289,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0.936113019343682,1.51547326768267,3.76734568396016,2.41221760681684,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0.21183207086382,0,0.98931751764888,0.484393280087717,0.120625849856312,0.596861720015682,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0,0,0,0,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.467863216890817,0.214871054048298,0,0,0.231867835620421|short_description=p3@Tlcd2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=380712 | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VC26 | |||
|association_with_transcript=116bp_to_ENSMUST00000043598,ENSMUST00000108435,NM_027249,uc007kdw.1,uc011xzl.1_5end | |||
|cluster_id=chr11:75281697..75281706,+ | |||
|description=CAGE_peak_3_at_Tlcd2_5end | |||
|id=chr11:75281697..75281706,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.78e-07,1;CL:0000632,1.78e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.51e-08!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.16e-13,22;UBERON:0007499,1.16e-13,22;UBERON:0006925,1.16e-13,22;UBERON:0009497,1.16e-13,22;UBERON:0000015,1.16e-13,22;UBERON:0002423,1.16e-13,22;UBERON:0006235,1.16e-13,22;UBERON:0008835,1.16e-13,22;UBERON:0003894,1.16e-13,22;UBERON:0004161,1.16e-13,22;UBERON:0008836,1.16e-13,22;UBERON:0001962,3.47e-13,2;UBERON:0001961,3.47e-13,2;UBERON:0001744,3.47e-13,2;UBERON:0009854,4.79e-13,23;UBERON:0009856,4.79e-13,23;UBERON:0002365,5.85e-12,25;UBERON:0002330,5.85e-12,25;UBERON:0002465,4.24e-09,3;UBERON:0003929,2.22e-08,55;UBERON:0003199,1.33e-07,1;UBERON:0000344,8.19e-07,15;UBERON:0000490,8.20e-07,66 | |||
|phase1_expression=0.160148847104794,2.09385244583617,1.36499771816861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,2.06468352960453,0,0,0.430942465371778,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0.289864488701678,1.72084775396277,0.679971333707751,2.69851595818909,0,4.48026887097336,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,34.5124643653817,0,0.229902104433473,0,0,0,0,0,9.05461797586555,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0,0.697601834251224,0.268273401399619,0.233530684734339,0.16455984991348,0.32833492815819,0.0810688095458557,0.438599962275997,0.658650345873152,0,0,0,0,0.264450566663544,0.213288250535234,0,0,0,0.22237804384487,0,0.474529061544512,0.823494773620054,1.50801125280162,0.397912944082302,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0.156998727841375,0,1.77871576252289,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0.936113019343682,1.51547326768267,3.76734568396016,2.41221760681684,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0.21183207086382,0,0.98931751764888,0.484393280087717,0.120625849856312,0.596861720015682,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0,0,0,0,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p3@Tlcd2 | |||
}} |
Latest revision as of 16:17, 25 September 2015
Short description: | p3@Tlcd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tlcd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 116bp_to_ENSMUST00000043598, ENSMUST00000108435, NM_027249, uc007kdw.1, uc011xzl.1_5end |
EntrezGene: | Tlcd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.78e-07 | 1 |
hepatic stellate cell | 1.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.16e-13 | 22 |
epithelial sac | 1.16e-13 | 22 |
digestive gland | 1.16e-13 | 22 |
epithelium of foregut-midgut junction | 1.16e-13 | 22 |
anatomical boundary | 1.16e-13 | 22 |
hepatobiliary system | 1.16e-13 | 22 |
foregut-midgut junction | 1.16e-13 | 22 |
hepatic diverticulum | 1.16e-13 | 22 |
liver primordium | 1.16e-13 | 22 |
septum transversum | 1.16e-13 | 22 |
liver bud | 1.16e-13 | 22 |
gut-associated lymphoid tissue | 3.47e-13 | 2 |
mucosa-associated lymphoid tissue | 3.47e-13 | 2 |
lymphoid tissue | 3.47e-13 | 2 |
digestive tract diverticulum | 4.79e-13 | 23 |
sac | 4.79e-13 | 23 |
exocrine gland | 5.85e-12 | 25 |
exocrine system | 5.85e-12 | 25 |
lymphoid system | 4.24e-09 | 3 |
gut epithelium | 2.22e-08 | 55 |
egg chamber | 1.33e-07 | 1 |
mucosa | 8.19e-07 | 15 |
unilaminar epithelium | 8.20e-07 | 66 |