FFCP PHASE1:Hg19::chr3:125900383..125900394,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10840 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3978 | |||
|TSSclassifier=strong | |||
|UniProt=C9IZ36 | |||
|association_with_transcript=-14bp_to_ENST00000490367_5end | |||
|cluster_id=chr3:125900383..125900394,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_13_at_ALDH1L1_5end | |||
|id=chr3:125900383..125900394,- | |||
|ontology_enrichment_celltype=CL:0000244!1.26e-13!4;CL:0000731!1.26e-13!4;CL:0002623!1.73e-08!3;CL:0002601!3.57e-07!1;CL:1001319!9.51e-07!1;CL:1000600!9.51e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.58e-34;1!UBERON:0008801;3.61e-34;1!UBERON:0006595;1.80e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001044!2.36e-24!6;UBERON:0003293!2.36e-24!6;UBERON:0003294!2.36e-24!6;UBERON:0010047!2.36e-24!6;UBERON:0000167!2.36e-24!6;UBERON:0003408!3.10e-20!10;UBERON:0000365!1.87e-18!5;UBERON:0005910!2.08e-15!6;UBERON:0000078!6.00e-15!18;UBERON:0000161!1.92e-14!35;UBERON:0004119!5.02e-14!169;UBERON:0000925!5.02e-14!169;UBERON:0006595!5.02e-14!169;UBERON:0001829!4.66e-13!2;UBERON:0004921!5.12e-13!129;UBERON:0004185!5.12e-13!129;UBERON:0001255!9.58e-12!2;UBERON:0001556!9.58e-12!2;UBERON:0001007!2.27e-11!155;UBERON:0001555!2.27e-11!155;UBERON:0007026!2.27e-11!155;UBERON:0001008!1.25e-10!45;UBERON:0001046!7.03e-10!19;UBERON:0000166!1.57e-09!21;UBERON:0000077!7.59e-09!130;UBERON:0006554!8.86e-09!44;UBERON:0000059!1.51e-08!11;UBERON:0006947!2.33e-08!3;UBERON:0004054!2.33e-08!3;UBERON:0006562!3.29e-08!11;UBERON:0002530!1.07e-07!59;UBERON:0004175!1.78e-07!25;UBERON:0001736!2.22e-07!1;UBERON:0006298!2.22e-07!1;UBERON:0001831!2.36e-07!1;UBERON:0001567!2.36e-07!1;UBERON:0008801!2.36e-07!1;UBERON:0002372!2.82e-07!1;UBERON:0001961!2.82e-07!1;UBERON:0001744!2.82e-07!1;UBERON:0001735!2.82e-07!1;UBERON:0000996!4.25e-07!1;UBERON:0000165!5.42e-07!28;UBERON:0000930!5.42e-07!28;UBERON:0000998!5.69e-07!1;UBERON:0006868!5.69e-07!1;UBERON:0001154!6.76e-07!1;UBERON:0001153!6.76e-07!1;UBERON:0001301!8.49e-07!1;UBERON:0007023!8.66e-07!115;UBERON:0004645!9.51e-07!1;UBERON:0001256!9.51e-07!1;UBERON:0001259!9.51e-07!1;UBERON:0003104!9.89e-07!238;UBERON:0009142!9.89e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.45e-66;2!UBERON:0001044;3.84e-50;6!UBERON:0003293;3.84e-50;6!UBERON:0003294;3.84e-50;6!UBERON:0010047;3.84e-50;6!UBERON:0003408;3.84e-50;6!UBERON:0000167;3.84e-50;6!UBERON:0001736;2.58e-34;1!UBERON:0001831;3.61e-34;1!UBERON:0001567;3.61e-34;1!UBERON:0002372;7.06e-34;1!UBERON:0001961;7.06e-34;1!UBERON:0001744;7.06e-34;1!UBERON:0001042;7.06e-34;1!UBERON:0001735;7.06e-34;1!UBERON:0000161;2.49e-28;19!UBERON:0000166;2.49e-28;19!UBERON:0004921;2.82e-22;33!UBERON:0001041;4.67e-22;14!UBERON:0000165;1.84e-19;28!UBERON:0004089;7.67e-18;2!UBERON:0003127;1.07e-17;2!UBERON:0006562;1.07e-17;2!UBERON:0002365;3.39e-10;31!UBERON:0002330;3.39e-10;31!UBERON:0001555;3.30e-09;54!UBERON:0000033;4.12e-09;50!UBERON:0001444;6.78e-09;48!UBERON:0000153;1.80e-08;54!UBERON:0007811;2.26e-08;52!UBERON:0001007;8.29e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.45e-66,2;UBERON:0001044,3.84e-50,6;UBERON:0003293,3.84e-50,6;UBERON:0003294,3.84e-50,6;UBERON:0010047,3.84e-50,6;UBERON:0000167,3.84e-50,6;UBERON:0001736,2.58e-34,1;UBERON:0006298,2.58e-34,1;UBERON:0001831,3.61e-34,1;UBERON:0001567,3.61e-34,1;UBERON:0008801,3.61e-34,1;UBERON:0002372,9.85e-34,1;UBERON:0001961,9.85e-34,1;UBERON:0001744,9.85e-34,1;UBERON:0001735,9.85e-34,1;UBERON:0003408,1.68e-30,10;UBERON:0000166,1.51e-24,22;UBERON:0000165,8.53e-19,29;UBERON:0000930,8.53e-19,29;UBERON:0004089,7.67e-18,2;UBERON:0003127,1.07e-17,2;UBERON:0000161,2.86e-15,36;UBERON:0001004,1.28e-11,74;UBERON:0001444,2.22e-11,49;UBERON:0002365,2.08e-10,31;UBERON:0002330,2.08e-10,31;UBERON:0004921,2.09e-10,118;UBERON:0000033,5.00e-10,56;UBERON:0001041,6.00e-10,87;UBERON:0000153,4.15e-09,62;UBERON:0007811,4.15e-09,62;UBERON:0001007,1.51e-08,145;UBERON:0001555,1.51e-08,145;UBERON:0007026,1.51e-08,145;UBERON:0004119,8.84e-08,160;UBERON:0000925,8.84e-08,160;UBERON:0006595,8.84e-08,160;UBERON:0007023,1.11e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.709522128141196,0,0,0,0,0,0,0,0,0.86101074534246,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83780436800028,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0.207216164163037,0.6828739083758,0,12.4765934057881,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12856355064087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,1.34704106029175,1.36272190246085,0,0.162806537221949,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p13@ALDH1L1 | |||
}} |
Latest revision as of 03:54, 20 September 2015
Short description: | p13@ALDH1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ALDH1L1_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -14bp_to_ENST00000490367_5end |
EntrezGene: | ALDH1L1 |
HGNC: | 3978 |
UniProt: | C9IZ36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data