FFCP PHASE1:Hg19::chr3:129158854..129158883,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8930 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6919 | |||
|TSSclassifier=strong | |||
|UniProt=E9PEE4 | |||
|association_with_transcript=0bp_to_ENST00000429544,ENST00000507208_5end | |||
|cluster_id=chr3:129158854..129158883,- | |||
|description=CAGE_peak_3_at_MBD4_5end | |||
|id=chr3:129158854..129158883,- | |||
|ontology_enrichment_celltype=CL:0000542!1.47e-12!53;CL:0000051!1.47e-12!53;CL:0000838!1.95e-12!52;CL:0000945!1.43e-10!24;CL:0000826!1.43e-10!24;CL:0000236!1.04e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.47e-10;24!CL:0000542;2.60e-08;53!CL:0000236;2.47e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.42e-12,53;CL:0000051,1.42e-12,53;CL:0000838,1.89e-12,52;CL:0000945,1.40e-10,24;CL:0000826,1.40e-10,24;CL:0000236,1.02e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.60e-08;53 | |||
|ontology_enrichment_disease=DOID:0050687!1.75e-07!143;DOID:162!2.27e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.91e-07,143;DOID:162,2.67e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.09e-17!115;UBERON:0001049!4.25e-09!57;UBERON:0005068!4.25e-09!57;UBERON:0006241!4.25e-09!57;UBERON:0007135!4.25e-09!57;UBERON:0000073!2.96e-08!94;UBERON:0001016!2.96e-08!94;UBERON:0005743!4.00e-08!86;UBERON:0001017!4.26e-08!82;UBERON:0000955!6.56e-08!69;UBERON:0006238!6.56e-08!69;UBERON:0002780!9.89e-08!41;UBERON:0001890!9.89e-08!41;UBERON:0006240!9.89e-08!41;UBERON:0003080!1.86e-07!42;UBERON:0002616!3.08e-07!59;UBERON:0002346!8.03e-07!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.04e-17,114;UBERON:0001049,2.21e-09,56;UBERON:0005068,2.21e-09,56;UBERON:0006241,2.21e-09,56;UBERON:0007135,2.21e-09,56;UBERON:0000073,7.73e-09,53;UBERON:0002616,7.73e-09,53;UBERON:0001016,2.11e-08,89;UBERON:0001017,2.68e-08,81;UBERON:0000955,3.97e-08,68;UBERON:0006238,3.97e-08,68;UBERON:0002780,9.73e-08,41;UBERON:0001890,9.73e-08,41;UBERON:0003080,9.73e-08,41;UBERON:0006240,9.73e-08,41 | |||
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| |||
|short_description=p3@MBD4 | |||
}} |
Latest revision as of 17:10, 24 September 2015
Short description: | p3@MBD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MBD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000429544, ENST00000507208_5end |
EntrezGene: | MBD4 |
HGNC: | 6919 |
UniProt: | E9PEE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.42e-12 | 53 |
common lymphoid progenitor | 1.42e-12 | 53 |
lymphoid lineage restricted progenitor cell | 1.89e-12 | 52 |
lymphocyte of B lineage | 1.40e-10 | 24 |
pro-B cell | 1.40e-10 | 24 |
B cell | 1.02e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.04e-17 | 114 |
neural tube | 2.21e-09 | 56 |
neural rod | 2.21e-09 | 56 |
future spinal cord | 2.21e-09 | 56 |
neural keel | 2.21e-09 | 56 |
regional part of nervous system | 7.73e-09 | 53 |
regional part of brain | 7.73e-09 | 53 |
nervous system | 2.11e-08 | 89 |
central nervous system | 2.68e-08 | 81 |
brain | 3.97e-08 | 68 |
future brain | 3.97e-08 | 68 |
regional part of forebrain | 9.73e-08 | 41 |
forebrain | 9.73e-08 | 41 |
anterior neural tube | 9.73e-08 | 41 |
future forebrain | 9.73e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.91e-07 | 143 |
cancer | 2.67e-07 | 235 |