FFCP PHASE1:Mm9::chr11:94871389..94871400,+: Difference between revisions
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{{FFCP|EntrezGene=217125|HGNC=|MCL_coexpression_id=22|UniProt=|association_with_transcript=193bp_to_ENSMUST00000128512_5end|description=CAGE_peak_12_at_Samd14_5end|id=chr11:94871389..94871400,+|ontology_enrichment_celltype=CL:0002319!4.55e-13!43;CL:0000221!9.45e-13!44;CL:0000133!9.45e-13!44;CL:0000540!3.96e-12!33;CL:0000047!3.96e-12!33;CL:0000031!3.96e-12!33;CL:0000404!3.96e-12!33;CL:0000055!1.97e-10!50;CL:0000117!2.34e-10!23;CL:0000337!2.34e-10!23;CL:0000393!7.89e-10!39;CL:0000211!7.89e-10!39|ontology_enrichment_celltype_v019_2=CL:0000540,2.80e-22,33;CL:0000047,2.80e-22,33;CL:0000031,2.80e-22,33;CL:0000404,2.80e-22,33;CL:0000117,3.16e-21,23;CL:0000337,3.16e-21,23;CL:0002319,8.64e-21,43;CL:0000221,3.81e-20,44;CL:0000133,3.81e-20,44;CL:0000393,8.09e-18,39;CL:0000211,8.09e-18,39;CL:0002609,1.44e-11,6;CL:0002321,3.75e-11,70;CL:0000723,9.30e-07,91;CL:0000048,9.30e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.30e-13!73;UBERON:0005743!3.30e-13!73;UBERON:0000073!3.42e-13!75;UBERON:0001016!3.42e-13!75;UBERON:0004121!1.05e-11!102;UBERON:0000924!1.05e-11!102;UBERON:0006601!1.05e-11!102;UBERON:0002346!1.63e-11!71;UBERON:0003075!1.63e-11!71;UBERON:0007284!1.63e-11!71;UBERON:0001049!1.45e-08!52;UBERON:0005068!1.45e-08!52;UBERON:0006241!1.45e-08!52;UBERON:0007135!1.45e-08!52;UBERON:0003056!2.16e-08!49;UBERON:0000033!1.71e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.68e-16,73;UBERON:0001016,1.71e-15,75;UBERON:0004121,3.53e-13,95;UBERON:0000924,3.53e-13,95;UBERON:0006601,3.53e-13,95;UBERON:0002346,1.61e-12,64;UBERON:0003075,1.61e-12,64;UBERON:0007284,1.61e-12,64;UBERON:0002020,3.88e-11,34;UBERON:0001049,9.61e-11,52;UBERON:0005068,9.61e-11,52;UBERON:0006241,9.61e-11,52;UBERON:0007135,9.61e-11,52;UBERON:0000073,4.00e-10,54;UBERON:0010371,4.41e-10,73;UBERON:0003056,4.18e-08,49;UBERON:0001948,4.99e-08,5;UBERON:0002315,4.99e-08,5;UBERON:0002780,6.01e-08,39;UBERON:0001890,6.01e-08,39;UBERON:0006240,6.01e-08,39;UBERON:0003080,1.20e-07,40;UBERON:0002616,4.40e-07,46;UBERON:0000955,7.68e-07,47;UBERON:0006238,7.68e-07,47|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,1.33243904726265,0.607425802169478,2.09868563438444,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0,0,1.74420125104357,0.659058548203415,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0,0.286533439938757,0,5.66486090406874,3.1739458756322,1.26766280701236,0,0,0,0,0,0.599200221036809,2.30530983192933,2.69592992002042,3.37514845829227,4.20649922702764,1.14260393761521,1.10434270475807,5.02212276781312,4.79227355091182,3.67687514644008,0,0.766124028511126,0.153606533256243,3.29715719325485,4.20843160571084,3.12548022334056,0.558365998002762,0,1.06958773443767,2.65165726926301,1.70846016958924,2.98239113320481,0.075726193333184,0.604572480854284,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,5.09610479413291,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.470354828542819,0,0,0,1.76922110389975,0.485300549842228,0.441683036920787,0.969750506270444,0,0.585561594023094,0.209446706813455,0,0.11981512450592,0,0,0.898743836428936,0.457500602818626,2.63874139437015,0.347648640384553,0,0.83115217823824,0.162241263067758,0.509196819251581,0,0,0.420883711772948,0.910843100738926,0.229902104433473,0.540186389416048,0.753524089178575,1.2246569847239,0.896796041993948,1.78033276663485,1.03481348295606,1.5089759505299,0.945530400839096,1.23165786914764,0.657587197282725,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0.473489471170421,0,0.308534225774757,0,0.536546802799238,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,3.60166143327496,0,0,1.06644125267617,0.928946687441754,0.38660238396628,0.80673409849337,0,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.685491075658373,0,0,0.193952487167626,0.210407459670956,0.379419222745544,0,0,0,0.296452627087149,1.33476084572875,1.17935397067922,0.899448449539415,0.608580364165509,0.482354319504834,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0,0.37898282354097,1.14075483509418,0.509235257325564,0.704070744865506,0.335012514883631,0.714130922658041,0,1.10344600874334,0.221464689648775,0.637819074629948,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,1.26203287766503,0.390438744296638,1.29254038639679,0.955875191810208,0,1.41538265394416,1.61924280669958,0.584511715822624,1.18586333383957,0.642642632843614,0,0.534196811001766,0.325773918707152,0.824850614862677,0,0.971122544619926,0.906970670894253,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,2.34079422240703,2.19909762430683,0.428674070063185,1.2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217125 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=193bp_to_ENSMUST00000128512_5end | |||
|cluster_id=chr11:94871389..94871400,+ | |||
|description=CAGE_peak_12_at_Samd14_5end | |||
|id=chr11:94871389..94871400,+ | |||
|ontology_enrichment_celltype=CL:0002319!4.55e-13!43;CL:0000221!9.45e-13!44;CL:0000133!9.45e-13!44;CL:0000540!3.96e-12!33;CL:0000047!3.96e-12!33;CL:0000031!3.96e-12!33;CL:0000404!3.96e-12!33;CL:0000055!1.97e-10!50;CL:0000117!2.34e-10!23;CL:0000337!2.34e-10!23;CL:0000393!7.89e-10!39;CL:0000211!7.89e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.80e-22,33;CL:0000047,2.80e-22,33;CL:0000031,2.80e-22,33;CL:0000404,2.80e-22,33;CL:0000117,3.16e-21,23;CL:0000337,3.16e-21,23;CL:0002319,8.64e-21,43;CL:0000221,3.81e-20,44;CL:0000133,3.81e-20,44;CL:0000393,8.09e-18,39;CL:0000211,8.09e-18,39;CL:0002609,1.44e-11,6;CL:0002321,3.75e-11,70;CL:0000723,9.30e-07,91;CL:0000048,9.30e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.30e-13!73;UBERON:0005743!3.30e-13!73;UBERON:0000073!3.42e-13!75;UBERON:0001016!3.42e-13!75;UBERON:0004121!1.05e-11!102;UBERON:0000924!1.05e-11!102;UBERON:0006601!1.05e-11!102;UBERON:0002346!1.63e-11!71;UBERON:0003075!1.63e-11!71;UBERON:0007284!1.63e-11!71;UBERON:0001049!1.45e-08!52;UBERON:0005068!1.45e-08!52;UBERON:0006241!1.45e-08!52;UBERON:0007135!1.45e-08!52;UBERON:0003056!2.16e-08!49;UBERON:0000033!1.71e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.68e-16,73;UBERON:0001016,1.71e-15,75;UBERON:0004121,3.53e-13,95;UBERON:0000924,3.53e-13,95;UBERON:0006601,3.53e-13,95;UBERON:0002346,1.61e-12,64;UBERON:0003075,1.61e-12,64;UBERON:0007284,1.61e-12,64;UBERON:0002020,3.88e-11,34;UBERON:0001049,9.61e-11,52;UBERON:0005068,9.61e-11,52;UBERON:0006241,9.61e-11,52;UBERON:0007135,9.61e-11,52;UBERON:0000073,4.00e-10,54;UBERON:0010371,4.41e-10,73;UBERON:0003056,4.18e-08,49;UBERON:0001948,4.99e-08,5;UBERON:0002315,4.99e-08,5;UBERON:0002780,6.01e-08,39;UBERON:0001890,6.01e-08,39;UBERON:0006240,6.01e-08,39;UBERON:0003080,1.20e-07,40;UBERON:0002616,4.40e-07,46;UBERON:0000955,7.68e-07,47;UBERON:0006238,7.68e-07,47 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,1.33243904726265,0.607425802169478,2.09868563438444,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0,0,1.74420125104357,0.659058548203415,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0,0.286533439938757,0,5.66486090406874,3.1739458756322,1.26766280701236,0,0,0,0,0,0.599200221036809,2.30530983192933,2.69592992002042,3.37514845829227,4.20649922702764,1.14260393761521,1.10434270475807,5.02212276781312,4.79227355091182,3.67687514644008,0,0.766124028511126,0.153606533256243,3.29715719325485,4.20843160571084,3.12548022334056,0.558365998002762,0,1.06958773443767,2.65165726926301,1.70846016958924,2.98239113320481,0.075726193333184,0.604572480854284,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,5.09610479413291,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.470354828542819,0,0,0,1.76922110389975,0.485300549842228,0.441683036920787,0.969750506270444,0,0.585561594023094,0.209446706813455,0,0.11981512450592,0,0,0.898743836428936,0.457500602818626,2.63874139437015,0.347648640384553,0,0.83115217823824,0.162241263067758,0.509196819251581,0,0,0.420883711772948,0.910843100738926,0.229902104433473,0.540186389416048,0.753524089178575,1.2246569847239,0.896796041993948,1.78033276663485,1.03481348295606,1.5089759505299,0.945530400839096,1.23165786914764,0.657587197282725,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0.473489471170421,0,0.308534225774757,0,0.536546802799238,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,3.60166143327496,0,0,1.06644125267617,0.928946687441754,0.38660238396628,0.80673409849337,0,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.685491075658373,0,0,0.193952487167626,0.210407459670956,0.379419222745544,0,0,0,0.296452627087149,1.33476084572875,1.17935397067922,0.899448449539415,0.608580364165509,0.482354319504834,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0,0.37898282354097,1.14075483509418,0.509235257325564,0.704070744865506,0.335012514883631,0.714130922658041,0,1.10344600874334,0.221464689648775,0.637819074629948,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,1.26203287766503,0.390438744296638,1.29254038639679,0.955875191810208,0,1.41538265394416,1.61924280669958,0.584511715822624,1.18586333383957,0.642642632843614,0,0.534196811001766,0.325773918707152,0.824850614862677,0,0.971122544619926,0.906970670894253,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,2.34079422240703,2.19909762430683,0.428674070063185,1.24138163549592,1.24858172321449,0.658196082408484,0,0,0,0,0,0.645857706783622,0.180938774784468,0,0,0,0.18542530201051,0.683483523191411,0.412773735926445,0.555583582109135,0.941842285023455,1.0935538217682,0.228778173206523,0,0,0.138199973804424,0,1.10717597753397,0.609958401380546,0.216010681643603,0.418176592028937,0.436725127492355,0.404593039154462,0.0826534557253359,0,0,0,0,0.598066184175915,0.330916980914195,0.388902376688095,0.387479470433193,0.168956125490778,0.352071715937262,0.2604087696879,0,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.194915761479505,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0.343706364687375,0,0.755393897389701,0,0.900642406448441,0,0,1.3492355185943,2.39414924040619,1.36586884603307,0.486213434136588,1.04806581313991,0.183843508450014,0.666740183404846,0.618105171716683,1.60459604795908,1.26348605881899,0.25347929989024,1.69763707247469,0.561849044819294,0.576226371643824,0.574354689556133,0.476293691283074,0.811190281613988,0.38581844092741,0.412085900803307,0.294397840268795,0,0.70990322463735,0.238436189947321,0.726732083161643,0.564656282491984,1.01537529470012,0.548783918618318,1.05227884575137,0.814824683075171,0,0.711810108745045,0.29551344712669,1.63692417267876,0.619747364743864,0.192906610981141,0.499621155875892,0.233931608445408,0.644613162144895,0.382576664137687,0.661774257358546,0.231867835620421 | |||
|short_description=p12@Samd14 | |||
}} |
Latest revision as of 00:31, 26 September 2015
Short description: | p12@Samd14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Samd14_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 193bp_to_ENSMUST00000128512_5end |
EntrezGene: | Samd14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.80e-22 | 33 |
neuronal stem cell | 2.80e-22 | 33 |
neuroblast | 2.80e-22 | 33 |
electrically signaling cell | 2.80e-22 | 33 |
CNS neuron (sensu Vertebrata) | 3.16e-21 | 23 |
neuroblast (sensu Vertebrata) | 3.16e-21 | 23 |
neural cell | 8.64e-21 | 43 |
ectodermal cell | 3.81e-20 | 44 |
neurectodermal cell | 3.81e-20 | 44 |
electrically responsive cell | 8.09e-18 | 39 |
electrically active cell | 8.09e-18 | 39 |
neuron of cerebral cortex | 1.44e-11 | 6 |
embryonic cell | 3.75e-11 | 70 |
somatic stem cell | 9.30e-07 | 91 |
multi fate stem cell | 9.30e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.68e-16 | 73 |
nervous system | 1.71e-15 | 75 |
ectoderm-derived structure | 3.53e-13 | 95 |
ectoderm | 3.53e-13 | 95 |
presumptive ectoderm | 3.53e-13 | 95 |
neurectoderm | 1.61e-12 | 64 |
neural plate | 1.61e-12 | 64 |
presumptive neural plate | 1.61e-12 | 64 |
gray matter | 3.88e-11 | 34 |
neural tube | 9.61e-11 | 52 |
neural rod | 9.61e-11 | 52 |
future spinal cord | 9.61e-11 | 52 |
neural keel | 9.61e-11 | 52 |
regional part of nervous system | 4.00e-10 | 54 |
ecto-epithelium | 4.41e-10 | 73 |
pre-chordal neural plate | 4.18e-08 | 49 |
regional part of spinal cord | 4.99e-08 | 5 |
gray matter of spinal cord | 4.99e-08 | 5 |
regional part of forebrain | 6.01e-08 | 39 |
forebrain | 6.01e-08 | 39 |
future forebrain | 6.01e-08 | 39 |
anterior neural tube | 1.20e-07 | 40 |
regional part of brain | 4.40e-07 | 46 |
brain | 7.68e-07 | 47 |
future brain | 7.68e-07 | 47 |