FFCP PHASE1:Hg19::chr3:134093254..134093271,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51421 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17812 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=15bp_to_ENST00000513145_5end | |||
|cluster_id=chr3:134093254..134093271,- | |||
|description=CAGE_peak_4_at_AMOTL2_5end | |||
|id=chr3:134093254..134093271,- | |||
|ontology_enrichment_celltype=CL:0000055!4.80e-16!180;CL:0000066!8.02e-13!254;CL:0000220!2.21e-11!246;CL:0002321!3.67e-11!248;CL:0000057!8.47e-11!75;CL:0000222!7.34e-09!119;CL:0000548!3.75e-08!679;CL:0000004!3.75e-08!679;CL:0000255!3.75e-08!679;CL:0000012!1.56e-07!682;CL:0000183!5.45e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.74e-07;55!CL:1000449;9.09e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.26e-09,76;CL:0000222,6.93e-08,121;CL:0000066,1.72e-07,253;CL:0002321,2.46e-07,250;CL:1000449,8.65e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!8.99e-15!216;UBERON:0000475!9.94e-13!365;UBERON:0003104!1.53e-10!238;UBERON:0009142!1.53e-10!238;UBERON:0005256!2.45e-10!143;UBERON:0003886!6.01e-10!63;UBERON:0000481!3.74e-09!347;UBERON:0002553!2.20e-08!70;UBERON:0000464!2.23e-08!104;UBERON:0004923!2.43e-08!57;UBERON:0000486!9.16e-08!82;UBERON:0009569!1.88e-07!113;UBERON:0002097!2.08e-07!40;UBERON:0000914!2.12e-07!83;UBERON:0002329!2.12e-07!83;UBERON:0003077!2.12e-07!83;UBERON:0003059!2.12e-07!83;UBERON:0007282!2.12e-07!83;UBERON:0009618!2.12e-07!83;UBERON:0007285!2.12e-07!83;UBERON:0000119!2.63e-07!312;UBERON:0000468!4.46e-07!659;UBERON:0000466!5.10e-07!126;UBERON:0004290!7.31e-07!70;UBERON:0000483!7.55e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;9.09e-07;15!UBERON:0004819;9.09e-07;15!UBERON:0001285;9.09e-07;15!UBERON:0007684;9.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.93e-10,199;UBERON:0003104,9.39e-10,160;UBERON:0009142,9.39e-10,160;UBERON:0007503,5.79e-08,78;UBERON:0000486,2.92e-07,83;UBERON:0001008,4.35e-07,48;UBERON:0006554,6.35e-07,47;UBERON:0004923,7.44e-07,66;UBERON:0006555,7.84e-07,16;UBERON:0004819,7.84e-07,16;UBERON:0004211,8.65e-07,15;UBERON:0009773,8.65e-07,15;UBERON:0001231,8.65e-07,15;UBERON:0001285,8.65e-07,15;UBERON:0007684,8.65e-07,15;UBERON:0004208,8.65e-07,15 | |||
|phase1_expression=5.4503513781167,3.63970890614671,6.48390258841467,6.00439790118782,7.59833860526389,8.72338524100369,0,0.631719873426831,1.56711376919903,2.94880723801811,4.88460817580699,2.18441372130172,2.90143676051299,1.11389717664042,3.97676850873499,2.01697543935533,2.41077811209591,0,0.975865597581014,3.32426856807327,6.12002073732759,1.56727360739044,0.286235987131057,0.821246550437305,2.88748071068046,0,0,0,0,0,0.309632246632152,1.83884244895785,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,2.81297636055767,6.14446559053763,7.52006865953834,9.84956328933601,1.5905718941022,1.94653948121054,2.3633704291017,3.54767035940102,3.42555664203192,1.70272798147026,1.45718115317017,4.07862887062872,0,0,0,0,0,0,0.79504962946682,1.72046919021225,0.347140501607594,0.56530794192401,1.67799774483962,0.550236083880135,0.835979866147242,1.29208379584664,0.35576626268671,1.33888245105868,0.402829317109147,1.52054421143703,1.95249646038536,0.367663080345869,1.62028389576352,0.892997282840798,0.44905874525234,0.337834441449967,0,0.949265659568129,0.183201743930407,0,0,1.3082821564276,4.47274756525787,3.67228483827281,8.60659675285922,6.02356903572509,1.06400514659507,1.12135520028461,4.2699598291882,0.74000264525148,0.622422070799533,0.808264032418128,0.490385709340376,2.11900398702904,0.576175924479999,1.87457145467037,0.312160076830321,1.1409436430889,0.747243402759005,0.704606991862589,0.647491777472526,0.421352420106746,0,0.859840221182376,0.413303124703062,3.56400857184616,3.70900393917835,0.910161361938026,5.03032699271367,0.505008341862199,0.125118519871964,1.10825646193673,3.95079858792754,5.21029252858333,2.70428506031874,0.794025282120147,14.8893397621755,6.40672166455702,3.60284231971255,11.4034616512073,3.40073346486848,14.9431513226465,3.90845398296339,5.23206629947925,2.72823614451356,12.6216887122057,3.03764665519588,2.10139873864455,17.0404604407975,4.63459651847145,4.23901480776219,1.15956511897978,1.09098448236334,0.860413786167011,0.487894824518382,0.265059536642971,0.348581828608555,0.414644220061482,0.252320850875628,0.36497735907583,10.9514672630871,13.5080597020506,5.52539685409922,13.4666699129274,11.5500717067134,1.53798840051797,2.52877035117153,0.723033089650446,1.10293972732394,1.52515610864684,1.18635309555548,0.539325232640658,1.17732879075208,1.53898862778556,0,0,2.8810180793198,4.41026134156626,0,0,0,0,1.8448265781467,2.40194934417936,1.20725313949488,4.49607013030478,1.3068766413512,1.11106134190236,1.3032332212413,0,4.3299402607582,0.579652024875384,2.7003999674239,0.433099343283221,0,0.570762456703795,1.58040879591855,6.86788929675898,0,0,0,0,1.00789276919316,0.567100388969546,2.68675568108545,2.61570544662566,1.53353071666084,0,0,0,0,0.12624243342638,0,0.381988425558278,0,1.71072446022705,0.616964956219941,0,0.571652865261156,2.13049060256185,4.79556075716608,2.2001485746285,4.39523833576444,10.7296933755565,0.845302752556,1.86156681609409,3.12022310734098,3.08648849114571,5.67396528093113,2.93064396917709,3.28849385413739,0.542621605391443,4.11620168390384,0.325736184293735,1.77695974371273,0.791951872933429,2.71295439353627,0.871533458600294,3.29910870900788,0,0,0,3.35474797688216,8.04033550838797,0,3.90909528002464,2.26023954805422,0.895304816199478,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,2.82190430954022,3.00102312635806,1.89885516589815,7.90289273817067,11.7763132606127,6.78120384645919,8.66846470946078,3.61135319673263,9.09630016223939,3.10419213877515,1.32845119707087,4.60922921354258,1.30325421702124,1.95801157462741,2.40200396667599,0,0,0,1.81876542867756,1.66435439510497,3.93107381328584,6.69891081110698,6.44540287809862,6.17452207752762,6.15067916427365,4.09365799253363,3.53878626515936,2.96836132889982,0.771048469013278,1.77561725313127,1.14978018419333,2.07701771673448,2.44041794765914,2.77976734060731,2.6065841139427,1.84161977871793,1.03333003348146,1.63882051206045,2.49136388422906,8.12159303233341,4.62092022626489,3.92174884588428,2.92278449306521,1.47772280450026,2.27466768141793,0.680374821106063,3.02282282542995,7.71136263451447,3.52230368807009,8.02703638167765,3.3133915495855,5.81753206250107,4.02974558499921,0,0,1.79515087581472,4.26419039409617,3.90454073597164,2.26690225624989,0.824125183365091,0.742585499285292,0,0.650060246036521,4.82051789532479,0.96670718292122,2.92692372517824,1.84204409671355,1.7918754422989,2.25582514223375,2.0302337147992,1.61930592090592,1.60257664164127,1.98341898433174,1.34533047155574,1.02090169995667,1.11273558941105,3.253918845081,6.2962469366128,4.1822236209636,1.54016790088044,2.66153015158511,1.73986598415015,3.52116016297448,1.43124886741991,4.46590043231601,1.58189712359363,3.43134349062885,1.535386747868,0.855877976067841,2.54562598340749,0,2.15846949099978,2.74537029736055,1.29593642580255,2.83055474202642,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| |||
|short_description=p4@AMOTL2 | |||
}} |
Latest revision as of 22:32, 24 September 2015
Short description: | p4@AMOTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AMOTL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000513145_5end |
EntrezGene: | AMOTL2 |
HGNC: | 17812 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.26e-09 | 76 |
mesodermal cell | 6.93e-08 | 121 |
epithelial cell | 1.72e-07 | 253 |
embryonic cell | 2.46e-07 | 250 |
epithelial cell of nephron | 8.65e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.93e-10 | 199 |
mesenchyme | 9.39e-10 | 160 |
entire embryonic mesenchyme | 9.39e-10 | 160 |
epithelial vesicle | 5.79e-08 | 78 |
multilaminar epithelium | 2.92e-07 | 83 |
renal system | 4.35e-07 | 48 |
urinary system structure | 6.35e-07 | 47 |
organ component layer | 7.44e-07 | 66 |
excretory tube | 7.84e-07 | 16 |
kidney epithelium | 7.84e-07 | 16 |
nephron epithelium | 8.65e-07 | 15 |
renal tubule | 8.65e-07 | 15 |
nephron tubule | 8.65e-07 | 15 |
nephron | 8.65e-07 | 15 |
uriniferous tubule | 8.65e-07 | 15 |
nephrogenic mesenchyme | 8.65e-07 | 15 |