FFCP PHASE1:Hg19::chr3:46000146..46000161,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79443 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14673 | |||
|TSSclassifier=strong | |||
|UniProt=C9J2W6 | |||
|association_with_transcript=0bp_to_ENST00000438446_5end | |||
|cluster_id=chr3:46000146..46000161,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_3_at_FYCO1_5end | |||
|id=chr3:46000146..46000161,- | |||
|ontology_enrichment_celltype=CL:0000148!1.13e-12!10;CL:0000541!1.13e-12!10;CL:0000625!3.33e-10!11;CL:0002567!5.23e-09!3;CL:0000147!1.16e-08!14;CL:0000791!1.43e-07!18;CL:0000789!1.43e-07!18;CL:0002420!1.43e-07!18;CL:0002419!1.43e-07!18;CL:0000790!1.43e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.15e-49;10!CL:0000147;3.91e-35;14!CL:0002567;1.96e-31;3!CL:0000710;2.02e-24;20!CL:0000075;6.32e-18;27!CL:0002077;1.52e-12;34!CL:0002566;1.31e-11;1!CL:0000895;4.44e-11;1!CL:0000791;7.00e-09;18!CL:0000789;7.00e-09;18!CL:0002419;7.00e-09;18!CL:0000625;1.55e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.16e-49,10;CL:0000541,2.16e-49,10;CL:0000147,3.91e-35,14;CL:0002567,1.96e-31,3;CL:0000710,2.02e-24,20;CL:0000075,6.32e-18,27;CL:0002077,4.26e-14,34;CL:0002566,1.31e-11,1;CL:0000810,4.44e-11,1;CL:0000895,4.44e-11,1;CL:0002436,4.44e-11,1;CL:0002427,4.44e-11,1;CL:0002428,4.44e-11,1;CL:0002429,4.44e-11,1;CL:0002433,4.44e-11,1;CL:0002431,4.44e-11,1;CL:0002432,4.44e-11,1;CL:0000333,5.33e-11,41;CL:0000791,6.85e-09,18;CL:0000789,6.85e-09,18;CL:0002420,6.85e-09,18;CL:0002419,6.85e-09,18;CL:0000790,6.85e-09,18;CL:0000625,1.51e-08,11;CL:0000133,1.54e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.68e-11;1!UBERON:0010227;2.68e-11;1!CL:0002427;4.44e-11;1!CL:0000790;7.00e-09;18 | |||
|ontology_enrichment_disease=DOID:0060084!3.27e-08!3;DOID:127!3.27e-08!3 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.13e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.13e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.26e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.68e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.42e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,1.53288197440768,1.03088233644789,0,0,0,0.950452044448374,0.301150238155546,0.127986611154418,0,0,1.64225599384209,1.41124720257313,1.60464117470104,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37600571456411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.297262324577456,0,0.16798212819886,0,0,0,0,0,0.352193736052904,0.207328115540772,0,0,19.0493682876507,25.5932245124046,29.3043618025117,13.6857956818164,8.22619941626588,20.7236709912303,46.5897085187842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0.394061520403854,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0.413536052245775,0,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,0,0,0.542999601753713,1.72844298240254,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.248385611765534,0,0,9.55389440512381,10.8476826747088,0,0,0,0,0,0,1.51522404220071,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.389720617678777,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,5.21778772489591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0,0,0,0,0,0,0.653150243690884,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0.402547587182052,0 | |||
|short_description=p3@FYCO1 | |||
}} |
Latest revision as of 09:41, 18 September 2015
Short description: | p3@FYCO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FYCO1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000438446_5end |
EntrezGene: | FYCO1 |
HGNC: | 14673 |
UniProt: | C9J2W6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.16e-49 | 10 |
melanoblast | 2.16e-49 | 10 |
pigment cell | 3.91e-35 | 14 |
light melanocyte | 1.96e-31 | 3 |
neurecto-epithelial cell | 2.02e-24 | 20 |
columnar/cuboidal epithelial cell | 6.32e-18 | 27 |
ecto-epithelial cell | 4.26e-14 | 34 |
dark melanocyte | 1.31e-11 | 1 |
CD4-positive, alpha-beta thymocyte | 4.44e-11 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 4.44e-11 | 1 |
mature CD4 single-positive thymocyte | 4.44e-11 | 1 |
resting double-positive thymocyte | 4.44e-11 | 1 |
double-positive blast | 4.44e-11 | 1 |
CD69-positive double-positive thymocyte | 4.44e-11 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 4.44e-11 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 4.44e-11 | 1 |
CD24-positive, CD4 single-positive thymocyte | 4.44e-11 | 1 |
migratory neural crest cell | 5.33e-11 | 41 |
mature alpha-beta T cell | 6.85e-09 | 18 |
alpha-beta T cell | 6.85e-09 | 18 |
immature T cell | 6.85e-09 | 18 |
mature T cell | 6.85e-09 | 18 |
immature alpha-beta T cell | 6.85e-09 | 18 |
CD8-positive, alpha-beta T cell | 1.51e-08 | 11 |
neurectodermal cell | 1.54e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.42e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.13e-21 | 2 |