FFCP PHASE1:Mm9::chr14:105658038..105658051,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=76273|HGNC=|MCL_coexpression_id=24|UniProt=|association_with_transcript=3bp_to_ENSMUST00000155351_5end|description=CAGE_peak_6_at_Ndfip2_5end|id=chr14:105658038..105658051,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.01e-10!43;UBERON:0000344!1.86e-09!15;UBERON:0001242!3.31e-08!13;UBERON:0000060!3.31e-08!13;UBERON:0001262!3.31e-08!13;UBERON:0004786!3.31e-08!13;UBERON:0005409!1.82e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.05e-13,31;UBERON:0000344,1.02e-10,15;UBERON:0001242,2.88e-09,13;UBERON:0001262,2.88e-09,13;UBERON:0004786,2.88e-09,13;UBERON:0011216,3.66e-09,194;UBERON:0005409,9.79e-09,47;UBERON:0001007,2.42e-07,116;UBERON:0001555,2.42e-07,116;UBERON:0007026,2.42e-07,116;UBERON:0004119,7.54e-07,118;UBERON:0000925,7.54e-07,118;UBERON:0006595,7.54e-07,118|phase1_expression=0.80074423552397,10.1202868215415,11.3749809847384,18.1478526784098,18.5331420080148,3.69334398206158,3.50418960893289,1.93684985162364,1.40788722151667,1.87251621057595,0.513653904676515,0.0797721589953364,2.05440875917447,1.74840804837995,0,0.202475267389826,1.39912375625629,0.788655413395594,0.685572168028694,0.42438965179803,0.935476191661768,0.992909512008853,1.56719873483361,6.39969691173627,4.12936705920906,6.89078356938024,5.1691439539089,8.18790684206378,6.84084310042946,8.56902441183765,6.87364583031445,0,0,0,1.73310971850765,1.82858109894342,1.42918549383658,0.837063261473815,1.5626706890476,0.523523743973798,1.76469446409304,0,0.485510353031154,0.377690453926732,0.709638518536602,1.28482726513177,0,0.218025156380447,0.659058548203415,0.777719596297134,0.699932108126813,0,1.17447824240415,1.45072428402269,1.68046899571232,0.514518872071894,0.573066879877513,2.06268836910977,0,2.64495489636016,0.633831403506179,0.338844532069132,0.889294796111139,2.2497492932035,0.988866362566974,1.4209602298922,1.19840044207362,0.384218305321555,0.829516898467821,0.540023753326763,1.47227472945967,0.285650984403804,1.76694832761291,0.734944795289724,0.862609239164127,2.75765635983006,0,1.65993539510744,2.4577045320999,1.05509030184155,1.37231465403614,1.56274011167028,1.11673199600552,0.56276261003168,1.37518422999129,0.589257170947335,1.13897344639282,1.1183966749518,2.34751199332871,2.79614772395106,0.869593466105033,2.58127163094416,2.03991400112325,1.07940638327563,1.94932925234301,1.79210754838934,1.54488862144927,0,0.779358013808606,0,1.83096445709685,0,0,0,2.38140145112336,1.52015919285059,1.01104889002957,2.51204535381932,0.258937883647172,0.742210695324124,0.520455980298408,0.608930956624282,1.15307748628029,1.50722640552623,1.05829836422134,1.13099932196708,3.70792451601561,0.86759614151947,0.884610551949874,0.808834249737046,0.662524555381181,1.93950101254089,0,1.75668478206928,2.30391377494801,4.08731288333746,0.239630249011841,0.599902730993408,1.27070227073065,2.09706895166752,3.20250421973039,0.628271760564322,1.73824320192276,1.02286182932132,2.0778804455956,1.94689515681309,0.81471491080253,1.11966273549084,0.252722758433675,1.05220927943237,0.520481771850815,0,0.360124259610698,0.90422890701429,0.95251098811859,1.2811372028485,1.3118241438362,1.55222022443409,0.862271971731369,0.567318240503458,0.527853372491847,0.43839146485515,1.11218899690239,0.348252166522167,0.823128545631774,0.59710280045548,0.702213187313235,1.02939162845886,0.284163499395593,0.828503090142008,0.703578179943289,0.540186184383045,0.710234206755631,0.787056926989615,0.925602677324269,0.697601834251224,0.804820204198858,1.16765342367169,0.16455984991348,0.820837320395476,0.56748166682099,0.730999937126662,1.53685080703735,0.671032093801859,0.841159794256509,0.92614151141356,6.27795687669216,3.17340679996253,0.639864751605702,0.928946687441754,2.19074684247559,1.81515172161008,2.44615848229357,3.61428689613862,3.79623249235609,4.11747386810027,3.2673577144035,2.58643413653496,1.16978452271472,4.49409704327111,4.10662294761919,2.98711909881551,0.758671603812327,0.456994050438915,1.1270773567308,0.610953983535943,1.93952487167626,1.68325967736765,0.948548056863859,1.32849133181642,2.66897837330337,2.96153193412321,2.66807364378434,0.500535317148282,0.589676985339609,0.449724224769707,0.405720242777006,0.72353147925725,1.01850340712568,0.863088412352432,0.486405680325106,0.823684239564244,1.43768206527355,2.23284568601102,0.624075346229121,3.03094653536534,1.4351793081753,2.8946611281802,0.923765950833023,0.757965647081939,0.488894929326078,1.18821560042632,0.234690248288502,1.00503754465089,1.42826184531608,0.780534591431195,1.10344600874334,1.10732344824387,1.2756381492599,2.29408640602033,0.863424909329478,2.16973587872267,4.52373851817817,1.08781136763742,3.44234991113325,0.275936746304732,2.40825884981688,1.87538698547525,0.163934945376675,0.504941854408746,1.26203287766503,1.17131623288992,1.50796378412959,0.716906393857656,1.33679204449436,0.849229592366497,1.61924280669958,0.876767573733936,1.58115111178609,1.28528526568723,0.99358059645788,0.35613120733451,0.651547837414304,0.989820737835213,3.98235415019888,0,0.604647113929502,2.07465587731488,0.885905678642318,1.22974059177571,2.06742634534577,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,2.06271086496374,1.36175842301515,0.900305470156551,0.517434735131018,0.643011105094777,1.41872186913819,1.60531935841864,1.31639216481697,0.608929898229199,0.704015124191131,0.847328283455281,1.54369878638473,0.16488625294148,0.807322133479528,0.422190474497091,1.3130957840345,1.14898629821543,1.45740418314925,2.22510362412612,0.512612642393558,1.23832120777933,1.11116716421827,0.753473828018764,0.410082683163076,0,0.849892149969277,0.279902904647316,0.967399816630967,3.81868247206045,0.949007980743406,0.406638934253697,0.540026704109006,0.836353184057875,2.40198820120795,0.404593039154462,1.32245529160537,0.785267825952089,2.72191443912765,3.10669656543463,3.38215763210514,0.299033092087958,0.496375471371293,0.388902376688095,0.258319646955462,0.844780627453891,0.58678619322877,0.911430693907651,0.524296722128554,0.724752362478018,1.15212002503146,2.8441000856536,0.810900861160657,0.718976700153791,0.129920822977795,0.895133478337407,1.39076948346885,1.20195449519969,0.443068581523732,1.21159739937777,0.990688486514998,0.504130925684203,1.07203668813728,1.53938946624527,1.28564592399726,1.13365191807606,0.665957860122194,0.62799699626633,0.167884616364078,1.54551675225752,1.31377732815827,1.83151624267265,0.643105137237198,1.50471631210609,0.564751842617067,2.30162618253588,1.14579102687879,1.54667864109319,2.74033007908257,1.5107877947794,2.02506750069542,2.2516060161211,2.26571204492102,0,0,0,0.512200817262403,1.21553358534147,0.628839487883947,1.10306105070008,0.666740183404846,0.618105171716683,0.962757628775446,0.505394423527595,1.2673964994512,0.943131706930381,0.936415074698824,0.704276676453562,1.14870937911227,0.476293691283074,0.927074607558844,0.192909220463705,0.412085900803307,1.32479028120958,0.685738504770831,1.4198064492747,0.715308569841963,0.436039249896986,0.0941093804153306,1.18460451048347,1.64635175585495,1.05227884575137,0.814824683075171,2.24456908663095,0.949080144993393,0.591026894253381,0.409231043169689,0.929621047115796,0.385813221962283,0.499621155875892,0.935726433781634,0.859484216193193,0,0.661774257358546,0.695603506861264|short_description=p6@Ndfip2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76273 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=3bp_to_ENSMUST00000155351_5end | |||
|cluster_id=chr14:105658038..105658051,+ | |||
|description=CAGE_peak_6_at_Ndfip2_5end | |||
|id=chr14:105658038..105658051,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.01e-10!43;UBERON:0000344!1.86e-09!15;UBERON:0001242!3.31e-08!13;UBERON:0000060!3.31e-08!13;UBERON:0001262!3.31e-08!13;UBERON:0004786!3.31e-08!13;UBERON:0005409!1.82e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.05e-13,31;UBERON:0000344,1.02e-10,15;UBERON:0001242,2.88e-09,13;UBERON:0001262,2.88e-09,13;UBERON:0004786,2.88e-09,13;UBERON:0011216,3.66e-09,194;UBERON:0005409,9.79e-09,47;UBERON:0001007,2.42e-07,116;UBERON:0001555,2.42e-07,116;UBERON:0007026,2.42e-07,116;UBERON:0004119,7.54e-07,118;UBERON:0000925,7.54e-07,118;UBERON:0006595,7.54e-07,118 | |||
|phase1_expression=0.80074423552397,10.1202868215415,11.3749809847384,18.1478526784098,18.5331420080148,3.69334398206158,3.50418960893289,1.93684985162364,1.40788722151667,1.87251621057595,0.513653904676515,0.0797721589953364,2.05440875917447,1.74840804837995,0,0.202475267389826,1.39912375625629,0.788655413395594,0.685572168028694,0.42438965179803,0.935476191661768,0.992909512008853,1.56719873483361,6.39969691173627,4.12936705920906,6.89078356938024,5.1691439539089,8.18790684206378,6.84084310042946,8.56902441183765,6.87364583031445,0,0,0,1.73310971850765,1.82858109894342,1.42918549383658,0.837063261473815,1.5626706890476,0.523523743973798,1.76469446409304,0,0.485510353031154,0.377690453926732,0.709638518536602,1.28482726513177,0,0.218025156380447,0.659058548203415,0.777719596297134,0.699932108126813,0,1.17447824240415,1.45072428402269,1.68046899571232,0.514518872071894,0.573066879877513,2.06268836910977,0,2.64495489636016,0.633831403506179,0.338844532069132,0.889294796111139,2.2497492932035,0.988866362566974,1.4209602298922,1.19840044207362,0.384218305321555,0.829516898467821,0.540023753326763,1.47227472945967,0.285650984403804,1.76694832761291,0.734944795289724,0.862609239164127,2.75765635983006,0,1.65993539510744,2.4577045320999,1.05509030184155,1.37231465403614,1.56274011167028,1.11673199600552,0.56276261003168,1.37518422999129,0.589257170947335,1.13897344639282,1.1183966749518,2.34751199332871,2.79614772395106,0.869593466105033,2.58127163094416,2.03991400112325,1.07940638327563,1.94932925234301,1.79210754838934,1.54488862144927,0,0.779358013808606,0,1.83096445709685,0,0,0,2.38140145112336,1.52015919285059,1.01104889002957,2.51204535381932,0.258937883647172,0.742210695324124,0.520455980298408,0.608930956624282,1.15307748628029,1.50722640552623,1.05829836422134,1.13099932196708,3.70792451601561,0.86759614151947,0.884610551949874,0.808834249737046,0.662524555381181,1.93950101254089,0,1.75668478206928,2.30391377494801,4.08731288333746,0.239630249011841,0.599902730993408,1.27070227073065,2.09706895166752,3.20250421973039,0.628271760564322,1.73824320192276,1.02286182932132,2.0778804455956,1.94689515681309,0.81471491080253,1.11966273549084,0.252722758433675,1.05220927943237,0.520481771850815,0,0.360124259610698,0.90422890701429,0.95251098811859,1.2811372028485,1.3118241438362,1.55222022443409,0.862271971731369,0.567318240503458,0.527853372491847,0.43839146485515,1.11218899690239,0.348252166522167,0.823128545631774,0.59710280045548,0.702213187313235,1.02939162845886,0.284163499395593,0.828503090142008,0.703578179943289,0.540186184383045,0.710234206755631,0.787056926989615,0.925602677324269,0.697601834251224,0.804820204198858,1.16765342367169,0.16455984991348,0.820837320395476,0.56748166682099,0.730999937126662,1.53685080703735,0.671032093801859,0.841159794256509,0.92614151141356,6.27795687669216,3.17340679996253,0.639864751605702,0.928946687441754,2.19074684247559,1.81515172161008,2.44615848229357,3.61428689613862,3.79623249235609,4.11747386810027,3.2673577144035,2.58643413653496,1.16978452271472,4.49409704327111,4.10662294761919,2.98711909881551,0.758671603812327,0.456994050438915,1.1270773567308,0.610953983535943,1.93952487167626,1.68325967736765,0.948548056863859,1.32849133181642,2.66897837330337,2.96153193412321,2.66807364378434,0.500535317148282,0.589676985339609,0.449724224769707,0.405720242777006,0.72353147925725,1.01850340712568,0.863088412352432,0.486405680325106,0.823684239564244,1.43768206527355,2.23284568601102,0.624075346229121,3.03094653536534,1.4351793081753,2.8946611281802,0.923765950833023,0.757965647081939,0.488894929326078,1.18821560042632,0.234690248288502,1.00503754465089,1.42826184531608,0.780534591431195,1.10344600874334,1.10732344824387,1.2756381492599,2.29408640602033,0.863424909329478,2.16973587872267,4.52373851817817,1.08781136763742,3.44234991113325,0.275936746304732,2.40825884981688,1.87538698547525,0.163934945376675,0.504941854408746,1.26203287766503,1.17131623288992,1.50796378412959,0.716906393857656,1.33679204449436,0.849229592366497,1.61924280669958,0.876767573733936,1.58115111178609,1.28528526568723,0.99358059645788,0.35613120733451,0.651547837414304,0.989820737835213,3.98235415019888,0,0.604647113929502,2.07465587731488,0.885905678642318,1.22974059177571,2.06742634534577,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,2.06271086496374,1.36175842301515,0.900305470156551,0.517434735131018,0.643011105094777,1.41872186913819,1.60531935841864,1.31639216481697,0.608929898229199,0.704015124191131,0.847328283455281,1.54369878638473,0.16488625294148,0.807322133479528,0.422190474497091,1.3130957840345,1.14898629821543,1.45740418314925,2.22510362412612,0.512612642393558,1.23832120777933,1.11116716421827,0.753473828018764,0.410082683163076,0,0.849892149969277,0.279902904647316,0.967399816630967,3.81868247206045,0.949007980743406,0.406638934253697,0.540026704109006,0.836353184057875,2.40198820120795,0.404593039154462,1.32245529160537,0.785267825952089,2.72191443912765,3.10669656543463,3.38215763210514,0.299033092087958,0.496375471371293,0.388902376688095,0.258319646955462,0.844780627453891,0.58678619322877,0.911430693907651,0.524296722128554,0.724752362478018,1.15212002503146,2.8441000856536,0.810900861160657,0.718976700153791,0.129920822977795,0.895133478337407,1.39076948346885,1.20195449519969,0.443068581523732,1.21159739937777,0.990688486514998,0.504130925684203,1.07203668813728,1.53938946624527,1.28564592399726,1.13365191807606,0.665957860122194,0.62799699626633,0.167884616364078,1.54551675225752,1.31377732815827,1.83151624267265,0.643105137237198,1.50471631210609,0.564751842617067,2.30162618253588,1.14579102687879,1.54667864109319,2.74033007908257,1.5107877947794,2.02506750069542,2.2516060161211,2.26571204492102,0,0,0,0.512200817262403,1.21553358534147,0.628839487883947,1.10306105070008,0.666740183404846,0.618105171716683,0.962757628775446,0.505394423527595,1.2673964994512,0.943131706930381,0.936415074698824,0.704276676453562,1.14870937911227,0.476293691283074,0.927074607558844,0.192909220463705,0.412085900803307,1.32479028120958,0.685738504770831,1.4198064492747,0.715308569841963,0.436039249896986,0.0941093804153306,1.18460451048347,1.64635175585495,1.05227884575137,0.814824683075171,2.24456908663095,0.949080144993393,0.591026894253381,0.409231043169689,0.929621047115796,0.385813221962283,0.499621155875892,0.935726433781634,0.859484216193193,0,0.661774257358546,0.695603506861264 | |||
|short_description=p6@Ndfip2 | |||
}} |
Latest revision as of 15:48, 25 September 2015
Short description: | p6@Ndfip2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ndfip2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 3bp_to_ENSMUST00000155351_5end |
EntrezGene: | Ndfip2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.05e-13 | 31 |
mucosa | 1.02e-10 | 15 |
intestinal mucosa | 2.88e-09 | 13 |
wall of intestine | 2.88e-09 | 13 |
gastrointestinal system mucosa | 2.88e-09 | 13 |
organ system subdivision | 3.66e-09 | 194 |
gastrointestinal system | 9.79e-09 | 47 |
digestive system | 2.42e-07 | 116 |
digestive tract | 2.42e-07 | 116 |
primitive gut | 2.42e-07 | 116 |
endoderm-derived structure | 7.54e-07 | 118 |
endoderm | 7.54e-07 | 118 |
presumptive endoderm | 7.54e-07 | 118 |