FFCP PHASE1:Hg19::chr4:109089380..109089395,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UJU2 | |||
|association_with_transcript=182bp_to_ENST00000265165,uc003hyt.1,uc003hyu.1,uc003hyv.1,uc010imb.1_5end | |||
|cluster_id=chr4:109089380..109089395,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_34_at_LEF1_5end | |||
|id=chr4:109089380..109089395,- | |||
|ontology_enrichment_celltype=CL:0000791!8.04e-24!18;CL:0000789!8.04e-24!18;CL:0002420!8.04e-24!18;CL:0002419!8.04e-24!18;CL:0000790!8.04e-24!18;CL:0000084!2.72e-21!25;CL:0000827!2.72e-21!25;CL:0000542!2.13e-17!53;CL:0000051!2.13e-17!53;CL:0000838!3.79e-16!52;CL:0000624!7.06e-15!6;CL:0000625!4.81e-13!11;CL:0000080!2.65e-09!6;CL:0000988!8.49e-09!182;CL:0000037!1.59e-08!172;CL:0000566!1.59e-08!172;CL:0000898!3.08e-08!3;CL:0000842!5.45e-08!3;CL:0002087!8.02e-08!119;CL:0002032!3.83e-07!165;CL:0000837!3.83e-07!165;CL:0000817!6.21e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.28e-22;6!CL:0000791;5.44e-22;18!CL:0000789;5.44e-22;18!CL:0002419;5.44e-22;18!CL:0000815;1.33e-17;2!CL:0000792;1.33e-17;2!CL:0002677;1.33e-17;2!CL:0000084;1.23e-15;25!CL:0000898;4.70e-12;3!CL:0000625;1.82e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.57e-22,6;CL:0000791,6.63e-22,18;CL:0000789,6.63e-22,18;CL:0002420,6.63e-22,18;CL:0002419,6.63e-22,18;CL:0000790,6.63e-22,18;CL:0000815,8.80e-18,2;CL:0000792,8.80e-18,2;CL:0002677,8.80e-18,2;CL:0000084,1.42e-15,25;CL:0000827,1.42e-15,25;CL:0000898,3.57e-12,3;CL:0000625,2.00e-07,11;CL:0000838,4.30e-07,52;CL:0000542,6.05e-07,53;CL:0000051,6.05e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;5.44e-22;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.63e-08!15;UBERON:0000179!1.63e-08!15;UBERON:0000463!1.63e-08!15;UBERON:0004177!2.93e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.82e-18;2!UBERON:0005058;4.82e-18;2!UBERON:0009113;4.82e-18;2!UBERON:0004177;9.42e-08;5!UBERON:0005057;9.42e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.31e-09,4;UBERON:0005058,1.31e-09,4;UBERON:0009113,1.31e-09,4;UBERON:0003295,1.31e-09,4;UBERON:0005562,1.31e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.983548850569165,1.57204305099666,1.02800749499755,0.83593247695339,1.30368906653436,1.89379122293893,1.94826728407911,0.557052284425868,1.76763544484902,1.32920336750173,1.08321545506006,0.128091319725675,0,0.986627427622057,1.65810010671509,1.15921234294021,0.889719378972363,1.33770414044857,2.09071047609954,1.58633079776593,0.383220493601921,1.37450978193052,1.01207876807801,1.59282707162048,0,0.950452044448374,1.05402583354441,0.255973222308837,2.49861453104692,0.710331756132051,0,0.201606743224732,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.620304078368662,1.2942852049117,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.371606350251437,0.144269212976445,0.497992903438899,0.637705090915289,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.66614393599564,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.664846727600626,0,0,0.335643173951685,0,1.74830236878417,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0.992332043623902,0.395223263795889,0.365377795142688,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0,0,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,2.64814530327625,1.73809200028402,0,0,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p34@LEF1 | |||
}} |
Latest revision as of 15:08, 24 September 2015
Short description: | p34@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_LEF1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 182bp_to_ENST00000265165, uc003hyt.1, uc003hyu.1, uc003hyv.1, uc010imb.1_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | Q9UJU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.57e-22 | 6 |
mature alpha-beta T cell | 6.63e-22 | 18 |
alpha-beta T cell | 6.63e-22 | 18 |
immature T cell | 6.63e-22 | 18 |
mature T cell | 6.63e-22 | 18 |
immature alpha-beta T cell | 6.63e-22 | 18 |
regulatory T cell | 8.80e-18 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.80e-18 | 2 |
naive regulatory T cell | 8.80e-18 | 2 |
T cell | 1.42e-15 | 25 |
pro-T cell | 1.42e-15 | 25 |
naive T cell | 3.57e-12 | 3 |
CD8-positive, alpha-beta T cell | 2.00e-07 | 11 |
lymphoid lineage restricted progenitor cell | 4.30e-07 | 52 |
lymphocyte | 6.05e-07 | 53 |
common lymphoid progenitor | 6.05e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.31e-09 | 4 |
hemolymphoid system gland | 1.31e-09 | 4 |
thymic region | 1.31e-09 | 4 |
pharyngeal gland | 1.31e-09 | 4 |
thymus primordium | 1.31e-09 | 4 |