FFCP PHASE1:Hg19::chr4:151749450..151749479,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:151749450..151749479,- | |||
|coexpression_cluster_id=C662 | |||
|description=CAGE_peak_at_chr4:151749450..151749479,- | |||
|id=chr4:151749450..151749479,- | |||
|ontology_enrichment_celltype=CL:0000838!4.31e-33!52;CL:0000738!1.85e-32!140;CL:0000542!3.55e-32!53;CL:0000051!3.55e-32!53;CL:0002087!4.63e-30!119;CL:0000037!2.61e-29!172;CL:0000566!2.61e-29!172;CL:0002031!7.42e-29!124;CL:0002032!4.26e-27!165;CL:0000837!4.26e-27!165;CL:0000988!3.15e-26!182;CL:0000791!3.86e-20!18;CL:0000789!3.86e-20!18;CL:0002420!3.86e-20!18;CL:0002419!3.86e-20!18;CL:0000790!3.86e-20!18;CL:0000084!6.03e-16!25;CL:0000827!6.03e-16!25;CL:0000625!1.51e-15!11;CL:0000945!1.62e-14!24;CL:0000826!1.62e-14!24;CL:0000236!4.97e-14!14 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.52e-39;11!CL:0000791;6.77e-37;18!CL:0000789;6.77e-37;18!CL:0002419;6.77e-37;18!CL:0000084;1.33e-25;25!CL:0000542;4.55e-24;53!CL:0000236;3.84e-20;13!CL:0000623;1.12e-12;3!CL:0000945;1.21e-12;24!CL:0002087;6.00e-12;104!CL:0000226;1.25e-11;3!CL:0000842;1.25e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.92e-44,52;CL:0000542,1.81e-43,53;CL:0000051,1.81e-43,53;CL:0000625,2.38e-39,11;CL:0000791,8.10e-37,18;CL:0000789,8.10e-37,18;CL:0002420,8.10e-37,18;CL:0002419,8.10e-37,18;CL:0000790,8.10e-37,18;CL:0000738,2.36e-29,136;CL:0002087,1.25e-27,115;CL:0000084,1.51e-25,25;CL:0000827,1.51e-25,25;CL:0002031,1.67e-24,120;CL:0000037,1.74e-23,168;CL:0000988,8.04e-22,177;CL:0002032,2.41e-20,161;CL:0000837,2.41e-20,161;CL:0000236,5.67e-19,14;CL:0000945,7.37e-13,24;CL:0000826,7.37e-13,24;CL:0000623,1.15e-12,3;CL:0000825,1.15e-12,3;CL:0000226,1.19e-11,3;CL:0000842,1.19e-11,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.77e-37;18!CL:0000051;4.55e-24;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.29e-10!102;UBERON:0003061!7.29e-10!102;UBERON:0002193!2.42e-09!112;UBERON:0000178!1.53e-07!15;UBERON:0000179!1.53e-07!15;UBERON:0000463!1.53e-07!15;UBERON:0007023!7.05e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.87e-11;15!UBERON:0000179;7.87e-11;15!UBERON:0000463;7.87e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.23e-11,15;UBERON:0000179,9.23e-11,15;UBERON:0000463,9.23e-11,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.246301768349837,0.157421562627358,4.32700704533794,7.67658796194425,0.77408061658038,0,0,0,0,0.142169232487422,0,0,1.00272223735071,1.51907609501096,0.223915474239924,1.29557466407592,0.257575567634187,0,0.377875943688809,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0,0,1.35426486594342,0.188242339542605,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0.150176892841506,0,0,0.59675003159727,0.365328307529268,1.75996244461323,1.63841583378639,0.889509253863555,1.70692089026603,0.800791974072025,2.29900975981793,1.32208974556972,1.90810750907073,3.98449078376614,2.34894875748376,1.52909291250092,1.32171328579026,0.560508562981536,0,0.786839080455332,0.393010762749165,1.02800749499755,0.501559486172034,0,0.473447805734733,0,4.56782873229212,1.76763544484902,1.32920336750173,4.06205795647523,1.40900451698243,5.33243324995501,1.31550323682941,0.829050053357545,0.579606171470105,0,0,0,1.0197840842781,0.766440987203842,1.71813722741315,2.78321661221453,4.77848121486145,3.90650072313851,2.85135613334512,1.20460095262218,2.8157054453972,6.24653632761729,3.31488152861624,3.28451198768419,6.65302252641617,6.41856469880418,4.92402973201517,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2725603747742,8.36460123125647,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,8.07826116827902,8.19384784466166,7.7005821767849,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,2.15714200818617,2.881644060693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,3.04468565539302,2.29391162142713,0.569647187174163,1.42939065274673,0.411362273086194,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0,0.159426272728822,0,0.5745161103971,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.93398740871803,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0.332423363800313,0,0,0,0,0.794682894901893,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,1.4776653734881,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.640724475406168,0,0.828478110694391,1.48849806543585,0,2.07047417247523,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.413373593002368,0,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0.0679697329768317,0,0,0,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0.437119121007915,0,0,0,0,0.297046400327086,0,0,1.2217909337381,0.193373663920732,0,0,0,0.0802413666891683,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0,0,1.0776328482334,0.0717222053926763,0.332660356546013,0,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0.805095174364105,0 | |||
|short_description=p@chr4:151749450..151749479,- | |||
}} |
Latest revision as of 02:14, 30 July 2015
Short description: | p@chr4:151749450..151749479, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:151749450..151749479, - |
Coexpression cluster: | C662_Mast_CD8_Natural_Basophils_CD4_Peripheral_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.92e-44 | 52 |
lymphocyte | 1.81e-43 | 53 |
common lymphoid progenitor | 1.81e-43 | 53 |
CD8-positive, alpha-beta T cell | 2.38e-39 | 11 |
mature alpha-beta T cell | 8.10e-37 | 18 |
alpha-beta T cell | 8.10e-37 | 18 |
immature T cell | 8.10e-37 | 18 |
mature T cell | 8.10e-37 | 18 |
immature alpha-beta T cell | 8.10e-37 | 18 |
leukocyte | 2.36e-29 | 136 |
nongranular leukocyte | 1.25e-27 | 115 |
T cell | 1.51e-25 | 25 |
pro-T cell | 1.51e-25 | 25 |
hematopoietic lineage restricted progenitor cell | 1.67e-24 | 120 |
hematopoietic stem cell | 1.74e-23 | 168 |
hematopoietic cell | 8.04e-22 | 177 |
hematopoietic oligopotent progenitor cell | 2.41e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.41e-20 | 161 |
B cell | 5.67e-19 | 14 |
lymphocyte of B lineage | 7.37e-13 | 24 |
pro-B cell | 7.37e-13 | 24 |
natural killer cell | 1.15e-12 | 3 |
pro-NK cell | 1.15e-12 | 3 |
single nucleate cell | 1.19e-11 | 3 |
mononuclear cell | 1.19e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 9.23e-11 | 15 |
haemolymphatic fluid | 9.23e-11 | 15 |
organism substance | 9.23e-11 | 15 |