FFCP PHASE1:Hg19::chr4:176594862..176594876,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2823 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4460 | |||
|TSSclassifier=strong | |||
|UniProt=P51674 | |||
|association_with_transcript=44bp_to_U45956_5end | |||
|cluster_id=chr4:176594862..176594876,- | |||
|coexpression_cluster_id=C1173 | |||
|description=CAGE_peak_29_at_GPM6A_5end | |||
|id=chr4:176594862..176594876,- | |||
|ontology_enrichment_celltype=CL:0000047!5.97e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;8.77e-24;6!CL:0000404;8.77e-24;6!CL:0002319;1.97e-09;25!CL:0000047;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.73e-31,8;CL:0000540,1.24e-23,6;CL:0000031,1.24e-23,6;CL:0000404,1.24e-23,6;CL:0002319,2.11e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000031;8.77e-24;6!UBERON:0006215;3.27e-21;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.39e-84!57;UBERON:0005068!8.39e-84!57;UBERON:0006241!8.39e-84!57;UBERON:0007135!8.39e-84!57;UBERON:0001017!1.46e-83!82;UBERON:0005743!2.81e-79!86;UBERON:0002791!1.47e-75!33;UBERON:0002020!2.84e-73!34;UBERON:0003528!2.84e-73!34;UBERON:0001893!3.47e-73!34;UBERON:0002616!4.57e-72!59;UBERON:0000073!6.30e-71!94;UBERON:0001016!6.30e-71!94;UBERON:0002780!5.07e-69!41;UBERON:0001890!5.07e-69!41;UBERON:0006240!5.07e-69!41;UBERON:0001869!2.31e-67!32;UBERON:0003080!3.12e-67!42;UBERON:0000955!1.21e-66!69;UBERON:0006238!1.21e-66!69;UBERON:0000956!2.83e-62!25;UBERON:0000203!2.83e-62!25;UBERON:0003075!7.91e-62!86;UBERON:0007284!7.91e-62!86;UBERON:0002619!9.91e-59!22;UBERON:0002346!1.15e-58!90;UBERON:0001950!4.52e-52!20;UBERON:0003056!2.58e-47!61;UBERON:0000033!6.36e-38!123;UBERON:0004121!4.51e-37!169;UBERON:0000924!5.55e-36!173;UBERON:0006601!5.55e-36!173;UBERON:0000153!9.88e-36!129;UBERON:0007811!9.88e-36!129;UBERON:0007023!3.10e-35!115;UBERON:0001871!5.92e-22!7;UBERON:0000025!1.90e-19!194;UBERON:0000349!2.92e-18!5;UBERON:0002420!3.05e-18!9;UBERON:0007245!3.05e-18!9;UBERON:0010009!3.05e-18!9;UBERON:0010011!3.05e-18!9;UBERON:0000454!3.05e-18!9;UBERON:0003076!4.09e-17!15;UBERON:0003057!4.09e-17!15;UBERON:0000200!1.49e-15!6;UBERON:0004111!7.94e-14!241;UBERON:0004733!3.15e-13!12;UBERON:0002028!3.15e-13!12;UBERON:0007277!3.15e-13!12;UBERON:0002308!4.76e-13!9;UBERON:0000125!4.76e-13!9;UBERON:0000477!1.09e-12!286;UBERON:0002771!3.75e-12!3;UBERON:0004732!3.91e-12!13;UBERON:0009663!4.66e-12!7;UBERON:0000064!4.90e-12!219;UBERON:0002021!5.24e-12!5;UBERON:0001872!9.74e-12!5;UBERON:0000483!5.41e-11!309;UBERON:0000119!8.56e-11!312;UBERON:0002298!4.93e-10!8;UBERON:0002680!1.08e-09!9;UBERON:0001895!1.08e-09!9;UBERON:0010092!1.08e-09!9;UBERON:0000475!3.86e-09!365;UBERON:0001876!1.73e-08!2;UBERON:0001870!1.86e-08!2;UBERON:0000369!1.99e-08!4;UBERON:0002435!1.99e-08!4;UBERON:0000204!1.99e-08!4;UBERON:0010082!1.99e-08!4;UBERON:0001954!2.24e-08!2;UBERON:0003022!2.24e-08!2;UBERON:0002421!2.24e-08!2;UBERON:0002600!2.24e-08!2;UBERON:0002360!8.64e-08!2;UBERON:0000094!8.64e-08!2;UBERON:0007645!8.64e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;2.96e-31;2!UBERON:0001950;6.65e-26;20!UBERON:0002619;1.21e-23;22!UBERON:0000200;1.24e-23;6!UBERON:0001870;3.27e-21;3!UBERON:0000956;6.65e-21;25!UBERON:0000203;6.65e-21;25!UBERON:0003112;1.53e-16;1!UBERON:0011158;1.53e-16;1!UBERON:0003128;1.53e-16;1!UBERON:0001703;1.53e-16;1!UBERON:0002241;1.53e-16;1!UBERON:0002791;1.24e-15;32!UBERON:0001869;1.97e-15;32!UBERON:0002021;3.88e-13;5!UBERON:0001893;1.18e-12;34!UBERON:0003528;1.52e-12;34!UBERON:0002020;1.52e-12;34!UBERON:0000073;2.69e-11;53!UBERON:0002616;2.69e-11;53!UBERON:0002037;4.15e-11;6!UBERON:0002771;3.43e-09;2!UBERON:0000955;9.46e-09;68!UBERON:0001016;1.40e-08;83!UBERON:0002780;2.68e-08;41!UBERON:0001890;2.68e-08;41!UBERON:0002680;1.05e-07;9!UBERON:0001895;1.05e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,1.60e-31,2;UBERON:0001950,7.76e-26,20;UBERON:0001017,2.02e-25,81;UBERON:0000200,9.14e-24,6;UBERON:0002619,1.39e-23,22;UBERON:0001016,7.68e-23,89;UBERON:0001870,2.17e-21,3;UBERON:0000956,7.52e-21,25;UBERON:0000203,7.52e-21,25;UBERON:0000073,1.84e-17,53;UBERON:0002616,1.84e-17,53;UBERON:0003112,1.41e-16,1;UBERON:0011158,1.41e-16,1;UBERON:0003128,1.41e-16,1;UBERON:0001703,1.41e-16,1;UBERON:0002241,1.41e-16,1;UBERON:0004761,1.41e-16,1;UBERON:0009617,1.41e-16,1;UBERON:0001049,1.64e-16,56;UBERON:0005068,1.64e-16,56;UBERON:0006241,1.64e-16,56;UBERON:0007135,1.64e-16,56;UBERON:0002791,2.13e-16,32;UBERON:0001869,2.13e-16,32;UBERON:0003528,1.88e-15,34;UBERON:0002020,1.88e-15,34;UBERON:0001893,1.88e-15,34;UBERON:0000955,2.47e-13,68;UBERON:0006238,2.47e-13,68;UBERON:0002021,5.60e-13,5;UBERON:0002780,7.62e-13,41;UBERON:0001890,7.62e-13,41;UBERON:0003080,7.62e-13,41;UBERON:0006240,7.62e-13,41;UBERON:0004121,1.41e-11,171;UBERON:0000924,1.41e-11,171;UBERON:0006601,1.41e-11,171;UBERON:0002037,3.06e-11,6;UBERON:0006215,3.06e-11,6;UBERON:0003075,3.81e-11,82;UBERON:0007284,3.81e-11,82;UBERON:0002346,1.33e-10,86;UBERON:0011216,2.85e-10,223;UBERON:0002771,3.43e-09,2;UBERON:0005253,5.94e-09,2;UBERON:0010371,1.15e-08,104;UBERON:0003056,1.27e-08,61;UBERON:0010314,1.72e-08,132;UBERON:0002680,8.60e-08,9;UBERON:0001895,8.60e-08,9;UBERON:0010092,8.60e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,2.31986643833309,1.00509759200609,5.74144876487847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,1.52581736317083,0.331737779793674,1.47773809476774,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.443175571691151,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,1.77213635993397,7.68765468882368,1.251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.478901577171454,1.02558182120378,1.00828678488687,0.414943514785307,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0.317079050969534,1.09394961803644,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.135939465953663,0.263091094251396,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.611923411718232,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p29@GPM6A | |||
}} |
Latest revision as of 21:41, 16 September 2015
Short description: | p29@GPM6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_GPM6A_5end |
Coexpression cluster: | C1173_medial_Neurons_parietal_temporal_medulloblastoma_occipital_duodenum |
Association with transcript: | 44bp_to_U45956_5end |
EntrezGene: | GPM6A |
HGNC: | 4460 |
UniProt: | P51674 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.73e-31 | 8 |
neuron | 1.24e-23 | 6 |
neuroblast | 1.24e-23 | 6 |
electrically signaling cell | 1.24e-23 | 6 |
neural cell | 2.11e-09 | 25 |