FFCP PHASE1:Hg19::chr4:186733483..186733489,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8470 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |||
|TSSclassifier=strong | |||
|UniProt=E9PAS5,O94875 | |||
|association_with_transcript=-73bp_to_NM_001145670,uc003iyk.2,uc003iyp.2,uc011ckx.1_5end | |||
|cluster_id=chr4:186733483..186733489,- | |||
|description=CAGE_peak_31_at_SORBS2_5end | |||
|id=chr4:186733483..186733489,- | |||
|ontology_enrichment_celltype=CL:0002586!8.80e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.78e-16;1!CL:0002625;1.78e-16;1!CL:0000216;1.78e-16;1!CL:0002535;6.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.21e-16,1;CL:0002625,1.21e-16,1;CL:0000216,1.21e-16,1;CL:0002535,5.08e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.72e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;1.78e-16;1!DOID:74;6.67e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.93e-16,1;DOID:74,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.45e-10!11;UBERON:0000020!3.13e-10!23;UBERON:0000970!3.93e-10!20;UBERON:0001032!1.12e-09!24;UBERON:0004456!1.12e-09!24;UBERON:0002104!1.61e-09!21;UBERON:0000019!9.66e-09!19;UBERON:0000047!9.66e-09!19;UBERON:0004088!9.66e-09!19;UBERON:0003072!9.66e-09!19;UBERON:0003071!9.66e-09!19;UBERON:0004128!9.66e-09!19;UBERON:0000153!2.09e-08!129;UBERON:0007811!2.09e-08!129;UBERON:0000488!4.62e-08!4;UBERON:0001456!1.09e-07!21;UBERON:0007023!3.45e-07!115;UBERON:0000033!3.52e-07!123;UBERON:0000966!5.34e-07!5;UBERON:0005388!5.34e-07!5;UBERON:0001802!5.34e-07!5;UBERON:0003056!6.42e-07!61;UBERON:0001781!8.80e-07!3;UBERON:0001782!8.80e-07!3;UBERON:0005424!8.80e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;1.78e-16;1!UBERON:0001136;1.78e-16;1!UBERON:0001343;1.78e-16;1!UBERON:0005623;1.78e-16;1!UBERON:0004910;1.78e-16;1!UBERON:0004813;1.78e-16;1!UBERON:0000966;3.13e-13;5!UBERON:0005388;3.13e-13;5!UBERON:0001802;3.13e-13;5!UBERON:0000970;1.49e-12;20!UBERON:0002104;5.69e-12;21!UBERON:0000020;5.89e-11;23!UBERON:0001032;1.64e-10;24!UBERON:0004456;1.64e-10;24!UBERON:0006955;6.67e-09;2!UBERON:0004909;6.67e-09;2!UBERON:0004801;6.67e-09;2!UBERON:0000019;7.02e-08;19!UBERON:0000047;7.02e-08;19!UBERON:0004088;7.02e-08;19!UBERON:0010230;7.02e-08;19!UBERON:0001456;3.53e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.21e-16,1;UBERON:0001343,1.21e-16,1;UBERON:0004910,1.21e-16,1;UBERON:0005154,1.21e-16,1;UBERON:0005295,1.21e-16,1;UBERON:0004813,1.21e-16,1;UBERON:0005297,1.21e-16,1;UBERON:0005294,1.21e-16,1;UBERON:0010141,1.21e-16,1;UBERON:0005891,1.21e-16,1;UBERON:0002146,2.25e-16,1;UBERON:0005623,2.25e-16,1;UBERON:0000970,6.20e-12,21;UBERON:0002104,6.20e-12,21;UBERON:0000966,4.16e-11,6;UBERON:0005388,4.16e-11,6;UBERON:0001802,4.16e-11,6;UBERON:0000020,1.77e-10,24;UBERON:0001032,1.77e-10,24;UBERON:0004456,1.77e-10,24;UBERON:0006955,5.08e-09,2;UBERON:0004801,5.08e-09,2;UBERON:0004909,5.49e-09,2;UBERON:0000019,1.77e-07,20;UBERON:0000047,1.77e-07,20;UBERON:0010312,1.77e-07,20;UBERON:0004088,1.77e-07,20;UBERON:0010230,1.77e-07,20;UBERON:0003072,1.77e-07,20;UBERON:0004128,1.77e-07,20;UBERON:0003071,1.77e-07,20;UBERON:0001456,7.63e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.572471974262113,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945348171640679,0.221729397462564,0.351339142772504,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0,0.116193942869518,0.829288440122964,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,2.08674728955138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,1.02580050046556,0.328014645699706,0.325378394664303,0.721287081534056,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0.34945333648406,0,0,0,0,0.0969890164884194,0,1.35588444468319,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0.857974989309823,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0,0,1.14580212005842,0,0.399358000997982,0,0.223171457441873,7.99483322592043,0,0,0.157566364614447,0.412079291905832,0.26961417541674,0,1.27009998098677,0,0.136203406111576,0,0.412618309791701,0,0,0,0.0607495566580247,0,0.0788057072991982,0.314727528809989,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,4.15045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0.54604819096007,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0.577628330751691,0,0,0,0,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.682986574053893,0,0.230467975111559,0,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,3.35939757630285,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0.219881033490858,0,0,0,1.41095188908457,0.245148321753905,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.378499274505237,0.327796715891087,0,0,0,0.0918948995348449,0.250707539292375,0,0.267964130156178,0,0,0,0.476128862927481,0.0645889098360061,0.248298857183432,0,0.318235791390825,4.44657815708082,0,0,0.0673520530145875,0.0717222053926763,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | |||
|short_description=p31@SORBS2 | |||
}} |
Latest revision as of 04:10, 17 September 2015
Short description: | p31@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_SORBS2_5end |
Coexpression cluster: | NA |
Association with transcript: | -73bp_to_NM_001145670, uc003iyk.2, uc003iyp.2, uc011ckx.1_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | E9PAS5O94875 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.21e-16 | 1 |
seminiferous tubule epithelial cell | 1.21e-16 | 1 |
Sertoli cell | 1.21e-16 | 1 |
epithelial cell of cervix | 5.08e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.21e-16 | 1 |
seminiferous tubule of testis | 1.21e-16 | 1 |
epithelium of male gonad | 1.21e-16 | 1 |
epithelial cord | 1.21e-16 | 1 |
sex cord | 1.21e-16 | 1 |
seminiferous tubule epithelium | 1.21e-16 | 1 |
testis sex cord | 1.21e-16 | 1 |
genital ridge | 1.21e-16 | 1 |
primitive sex cord of indifferent gonad | 1.21e-16 | 1 |
coelomic epithelium | 1.21e-16 | 1 |
pulmonary valve | 2.25e-16 | 1 |
semi-lunar valve | 2.25e-16 | 1 |
eye | 6.20e-12 | 21 |
visual system | 6.20e-12 | 21 |
retina | 4.16e-11 | 6 |
photoreceptor array | 4.16e-11 | 6 |
posterior segment of eyeball | 4.16e-11 | 6 |
sense organ | 1.77e-10 | 24 |
sensory system | 1.77e-10 | 24 |
entire sense organ system | 1.77e-10 | 24 |
uterine epithelium | 5.08e-09 | 2 |
cervix epithelium | 5.08e-09 | 2 |
epithelium of gonad | 5.49e-09 | 2 |
camera-type eye | 1.77e-07 | 20 |
simple eye | 1.77e-07 | 20 |
immature eye | 1.77e-07 | 20 |
ocular region | 1.77e-07 | 20 |
eyeball of camera-type eye | 1.77e-07 | 20 |
optic cup | 1.77e-07 | 20 |
optic vesicle | 1.77e-07 | 20 |
eye primordium | 1.77e-07 | 20 |
face | 7.63e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.93e-16 | 1 |
hematopoietic system disease | 6.94e-09 | 2 |