FFCP PHASE1:Hg19::chr4:57302399..57302441,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10606 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8587 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=81bp_to_ENST00000512576_5end | |||
|cluster_id=chr4:57302399..57302441,+ | |||
|coexpression_cluster_id=C896 | |||
|description=CAGE_peak_1_at_PAICS_5end | |||
|id=chr4:57302399..57302441,+ | |||
|ontology_enrichment_celltype=CL:0000012!2.36e-25!682;CL:0000548!1.20e-24!679;CL:0000004!1.20e-24!679;CL:0000255!1.20e-24!679;CL:0000066!9.77e-18!254;CL:0000003!2.27e-16!722;CL:0002321!8.55e-12!248;CL:0000220!4.03e-11!246;CL:0000144!2.19e-10!625;CL:0000055!4.00e-09!180;CL:0000063!2.83e-08!578;CL:0000221!5.84e-08!71;CL:0000133!5.63e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.96e-18,253;CL:0002321,1.11e-11,250;CL:0000221,6.25e-08,72;CL:0000133,5.63e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.23e-46!239;DOID:162!1.29e-46!235;DOID:0050686!1.43e-22!137;DOID:0050687!1.95e-21!143;DOID:2531!4.05e-19!51;DOID:0060083!4.05e-19!51;DOID:305!3.66e-18!106;DOID:1240!4.08e-15!39;DOID:8692!9.31e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.28e-12;39!DOID:2531;1.04e-11;51!DOID:0060083;1.04e-11;51!DOID:8692;2.30e-11;31 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.23e-46,239;DOID:162,1.29e-46,235;DOID:0050686,1.43e-22,137;DOID:0050687,1.95e-21,143;DOID:2531,4.05e-19,51;DOID:0060083,4.05e-19,51;DOID:305,3.66e-18,106;DOID:1240,4.08e-15,39;DOID:8692,9.31e-12,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=20.7113352368435,29.3317717730647,31.0099689011137,14.0102617694383,15.1966772105278,26.1701557230111,27.8629865985142,94.7579810140247,36.0436166915777,61.4334841253772,20.2362338712004,37.5719160063896,18.4636884759917,76.1163070704287,51.6979906135549,43.0288093729136,42.1886169616784,49.6610861463414,35.1311615129165,57.3744130637832,27.5400933179742,20.0611021745976,141.973049617004,128.11446186822,122.529616244528,231.532619416292,228.978543975899,249.670598326991,3.93364276848904,3.0706351847777,5.88301268601089,54.2458522442567,29.8193859590468,50.6562993928499,271.987341237439,307.796388335268,131.532996822012,4.43196326825502,2.60707781711184,3.90619567288533,6.94137970143765,7.77344798445551,4.63636021741536,1.74477886535478,1.51150377475524,0.242584061187816,0.232429036905685,2.46700732813095,2.16794459626573,0.28769239232215,3.07392847834921,2.12834006899727,2.41321976515633,4.51839278508678,2.70852973188684,0.941211697713023,1.36453075028923,1.12361742222542,0.306083892370903,2.24650318953266,2.55734850319616,0.329851300186716,2.39356389145958,0.852449501065388,2.03146467040009,2.26954089876456,0.622822248995575,1.50749199154046,2.60741459210101,2.6062661364614,6.65939452896706,1.84138817993782,1.89877432464531,5.70389273042243,6.80333759888139,9.01532175686016,4.94245977044578,5.40636814229423,4.018139667427,2.56511469367124,3.38158351238453,3.28795476776341,22.879511779972,19.1148513941746,20.4587128388618,19.2028600154928,22.8225712610527,14.3688109988621,23.1365705474702,25.7594513724548,9.10740750575117,7.6340834618222,8.79228424688026,56.8336712889811,36.9935651567814,143.544326202417,16.523620689562,10.6112905942274,9.45766895397742,43.9700482877483,21.8367918644506,25.0927337039409,15.5861382726329,31.9748011260448,15.0249012812167,15.7289065154371,19.2270743273161,29.973368815808,25.2315134266164,32.5587051115279,28.1877018141565,45.7888875461383,28.3227335639535,37.4557159325598,29.2699466653935,58.4676208319442,23.7596706033191,14.0887252647878,21.2536541296382,17.8396632021494,14.3238359848412,13.3063286222772,20.9299415518104,19.581951506626,16.240994451805,17.7582939033013,14.7803039445788,8.26587647221403,3.7441627409691,7.24122019413995,48.7613732627923,50.9732653374763,120.446533256606,71.5649521721441,41.1097086721429,45.4818069536986,86.6861682285698,24.3317435151318,134.239440372976,93.7915351266646,94.5102294058036,14.2767192292507,34.243757099499,47.460408676407,5.19275829847493,4.87563264437948,7.71156171009418,24.5645343034502,25.1677760743256,23.030365082433,64.9953072089126,43.8719643504123,55.5424802572151,35.0490923992886,47.4034362917194,77.8584058690391,62.6984899610432,50.3912680380191,35.2208600059843,36.1498261785844,39.0744437595873,60.821768457481,21.7215231217871,97.4307162916552,33.2158198631521,143.951161993937,60.3984012364397,75.5623034043092,52.1276567384003,56.0066739145196,58.6245580577303,2.63560834872127,0,34.4514301192602,22.3637378262893,87.6283140718892,66.0721812257962,56.5068142875163,74.8350286438533,60.5531808153692,51.2395179502584,36.7534647141568,83.4045574871374,67.355336034844,94.4809799995791,36.3257826347835,43.7893702604799,40.5376077072468,119.869469502843,115.805779773523,98.1877831225333,184.372162870711,168.671608031593,191.15354792176,108.405864936348,131.187050888968,55.5892702725618,36.8280885757437,25.7157606449699,31.8556476678309,9.3420358436111,193.418194933222,135.878712580953,120.52289023562,43.0198068463221,41.6823402286667,21.7845185414565,149.617049588068,85.9276354949649,46.3419533736291,81.5937819464313,83.7254158075482,75.3313988732988,42.2530485674832,42.8068769562657,83.5442844594268,82.0419583457292,75.2252647247461,50.6274442532646,60.9405634206921,61.0616499128577,74.7580568849091,109.027460855644,42.324126842762,80.4601055742962,65.3914477486929,246.020965263394,274.86673949876,268.175620142848,140.875373765888,231.630541103827,259.498902302915,32.8544017892614,30.2323240950656,31.7710319110705,44.114953163038,51.9753226802102,198.637117266898,191.343623238645,201.003198922824,182.095348981182,204.588798002769,189.816495288877,192.808770669035,194.455471939218,222.383856715014,22.1446636387394,21.0362660705169,28.810180793198,10.2906097969879,48.1669132322957,57.9868057839799,41.9460833743797,135.970634619712,75.0229475112993,191.812811913752,98.3362557261285,64.0689993568432,134.809352003997,183.973240529998,32.9066388363428,25.9983696319895,138.558088344262,96.2222361293138,66.2185035490034,69.7289942685987,62.5030441978424,58.7885330404909,23.7061319387783,35.1979326458898,14.0343693469816,21.9964009230883,19.7679445844009,63.7390071110083,50.5626205878567,126.321611642966,148.577589164025,184.552550956366,75.1430051163814,84.7380769181023,21.7479632012668,8.08579650609011,5.6206781832615,4.79721247020244,130.488172770407,32.8510045980119,19.926966025708,34.214489204541,138.405805178673,93.1063479316144,74.8865253492115,96.6569947057009,71.9334113574912,285.139255271854,43.6938399261289,1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| |||
|short_description=p1@PAICS | |||
}} |
Latest revision as of 02:37, 18 September 2015
Short description: | p1@PAICS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAICS_5end |
Coexpression cluster: | C896_retinoblastoma_iPS_acute_lymphoma_chronic_Burkitt_testicular |
Association with transcript: | 81bp_to_ENST00000512576_5end |
EntrezGene: | PAICS |
HGNC: | 8587 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.96e-18 | 253 |
embryonic cell | 1.11e-11 | 250 |
ectodermal cell | 6.25e-08 | 72 |
neurectodermal cell | 5.63e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.23e-46 | 239 |
cancer | 1.29e-46 | 235 |
organ system cancer | 1.43e-22 | 137 |
cell type cancer | 1.95e-21 | 143 |
hematologic cancer | 4.05e-19 | 51 |
immune system cancer | 4.05e-19 | 51 |
carcinoma | 3.66e-18 | 106 |
leukemia | 4.08e-15 | 39 |
myeloid leukemia | 9.31e-12 | 31 |